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Gene detail [Fasta]

Species Aedes aegypti
GeneAAEL005515
Positionsupercont1.161:377043..391167[GBrowse]
VectorBasehttp://www.vectorbase.org/search/site/AAEL005515
Gene Expressionhttps://www.vectorbase.org/expression-browser/gene/AAEL005515
sequence mRNA: 
>AAEL005515-RE
AGTGCGCAGTATTCTTTCTCTTCGGGTTCATCGCTGGAGCAAGACGCGATCACACGCCACTCGCTGAGAAGTCGCGTTTC
AAAATTTAGCATTTGCTAGTAAATTGAGTGTGATTCCTAGGATCTCCAGTTTCGAAGGAAAAAGCAACTTTTTCCTGACA
AATTTTAAGCACTTTCGTGAAGAGCAGTATATTTTTACGGAATTAACCGCGTTCGGGGCTTGTTTTAGTCGTATTATAAT
AAAGTGTAGTCAGTGTTAAGACAAGAAAAGTAAAATGGCCGATCAGGATCAAGAGATGAACGGAAACGGCCAGGAGTCGC
AGGACCAGAACGGAGGCGACCAGAATGGAGCCGAATCCAGCAACGTTCGCGATGACGACAGAAAATTATTCGTTGGTGGA
CTTAGTTGGGAAACATCAGACAAGGAACTGAAGGAACACTTCGGTCAATACGGTGAAATCGAGAGCATAAACGTCAAGAC
AGACCCCAACACGGGCCGCTCGCGAGGATTTGCCTTCATCGTGTACAAGAGTGCCGACTCGATCGACAAGGTTGTGGCCG
CCGGAGACCACGTTATCAACAACAAGAAGGTCGACCCCAAGAAGGCCAAGGCACGCCACGGCAAAATCTTCGTCGGTGGA
TTGACCACGGAGATCAGCGATGAAGAGATCAAGACCTTCTTCGGACAGTTTGGCAACATCGTCGAGGTTGAGATGCCATT
CGACAAGCAGAAGAACCAGCGCAAGGGCTTCTGTTTCATCACCTTCGACTCCGAACAGGTGGTGAACGAACTGCTCAAGA
CGCCAAAGCAGACCATCTCCGGCAAGGAGGTGGACGTCAAGAAGGCCACTCCCAAGCCCGACAACATGCACATGGGTGGC
CCAATGGGCGGCCGCGGTGGCATGCGAGGCCCGCCACGAGGCGGCATGCGAGGTGGACGCGGGGGACCTGGAGGACCCAA
AGGCTACGGACAAGGCTGGGGCGGTCAGGGATACGGAGGTGGCGGCTACGGCAACCAGGGCGGATATGGATACGGTGACT
ATTATGGCGATTGGGCGGGATGGGGCTACAACGGTTATGATTACTCCCACTACGGTAAATTCAACAACCATTCACAGAAA
CACTACCATTGAGAGACTTTTCTTCTTGAATAACTTTTTAATTACCTTTTTTTTTTGTCTTAAACAACCACCCCCAAAAC
ATACTTTTTTGCCTTTTTACCTATCAGAAATATTTGACTATCTTTAAGATTGAAATTTTTTGTCATTGCCAATTTACTCG
TTCTTTTTGCGATACAAATTTTCGAATGGAGGTGTGTTTAATTAACGTATTTGATACAAAAGAGTAAAGCATTTAACTGA
AAAAATACGTGGGTTGAAAGTAAACAAAAGTTAGTCTTTAGAGCATGAGTTAATTTTCGAATCTAATATTGGTAAAACAT
GTTTTTTTTCCTTCTGAACGAGAGTAAGAGTAAAGTAAAAACAGAAAGCACCTCACTTGAAGCGTTTTGTAGCGTTTTTG
TTGTGCATTGATCTAAAAATATCCAAGTTCGGAAGCATCTCAAGAAATACCTCATATAATCAAAGTTGCGCTTAGTGATT
AGTAGTTACCGCTGTTGTCTTTTTAAAAACTCGCAACAATATTTCACCAGAGAGATGCAGGAGCAGTCCTGTCCCTTGAT
ACATTCAGTCCGTATTTTGTTATTCTAAAAAGCAATTCAGAGAGAGCGGAGCAAAGTCTCTTTATGCATTGTCCAAATGT
TTGCTTTTGCTGGAAGTAATCTTTCCGTCGAGTTTTAATTTTTCCGCGCGCGCGTTTGTTCCATTCCAGTCACTTTTCGA
ACATTGCCACACTCGTAACACCACCGACACGCAAATTTTGTTTTGATCGAATCGATTTTCTTTCCAACTTGTCGAAATTT
TTTCAATTTTGTTTTAATTGCGAGACGCGCGTCGCCTCACTTAGCAATCAACAATAACTTTTGCTTGACACATTTGTTTT
AAAAAATCAAAGAGAACACCGAATTACCTCAAAGTGCAAATATTTTTTTTATTACGTTTTGTCGTTAGAAAACAAAATAT
TAACACACTAAAGTAAAAATCGAAAATATTCTGAAAAACGGTTTTGTTTTCTGGTCAACTGTTTTCTTACATTAAGAAAG
AGAGTTGTTAATGTTAATGGTTGTTGTTTTTTCTGCCTTTTTCCATCATATTTTGTCTTTCCTTTTCCTTTCACACATGT
AATATTATGATGAGTCAAAGAGGGTGGGAATAGTTCCAATAGGAAAGGGGATTACAAGCGTTTCCTTCTGCCGAACGAAG
AAAAAGGGAGGCGAAAGGAAATGAAATGAAAGAATTATGCAGAAAGTTCCGAGAAGAAGGAGGAACAAACAACTTGAGAT
TACGAGATCGATGCTTTGAAGAAATCGTTTTGAATCTATTTTCGATTTTACTATTAGAAGCGAGACTCTGGTGCGAATAT
TTTTCCCTTATTTTTAACGAAAATTTTCTCTCGACAGTCGACAGTCGTGCTGCATCCGGAAGAGATATCTCTCTTTCCAG
ATAGGATCGGCTGTGGCGTCGAGAGAAAAGCGAACTGACTGCAAAAATTGCCTGTGATAGACATACAATCAAATGGGGAA
AATTAAGGAGGAAGTTTGCTACTAATAACACGCAAAGAGTCTTATTTTTTTATACGAAAAGGACATTGTTATTGTTTAAG
TTCTTTAGCAATAAGGTCAGCGATGAGAGAGATAGAGAAAGAGCGAGTCTAAGAGCGATTCGACCGTAGGCGCGCAATTC
TTTTTGGTGCCCGGTTCCTCTTCTCGACAAGTGTCCTTTGTGGGAGATACTGAGAAAACGACAAGTATTTTTTGTGGCAA
GATTTATCGAAATTTCGACACATTCTTAGTTGATCTTCTGATAACATTCAGAAAACGGTAGAGGAAACACTAGAGAGTCA
GGAAATTAACGTACCTACAACTTTTGTTTGCTGAAATTCCATTTTATATAAATCGAAGTAATCAAATCGTCATTCATCAT
GAATATAGTAAAAGAAACGCACTCATGCTTCTCCATTCGTAAATCTGACTTGAACGATTGTGGTAAGAGCGGAATCGTAA
GTTGCGACTATGCAAGAAATGTTGAAGGAGACAGTACTATCGCTCTTTCAAATTCTTCTTGTCCGTTACACGATTATGCT
CTTTCCCAGAGAATAGAATATTCTTTACTTTGCATGCATGCTGATTTTGTATAATTTTGTTTTGTCAAACATCAGAGAGG
TTACTAATACTGTTGTATATCATGTGTAATCAATCAGAACAGTAATCGAAACACAACCTTTTTCAGTTAAACATTAAGAG
ATCTAATTTACTATTTGTAACATTTCGTTATTTACATATAAATGCCCTATCTTCCCTATCACGTTTGTTACCACCACCAC
CGCAAACGATAGAATTATGTTATTTCCAAAATTTAATTTAATCAATCGCGCAGTTCATTTACATGCCTACACATACCAAT
GCGTTTCGTTGCACAGTCAAACATTTAGCTGATTGGGTCAATATGGCGTATCTTCCTAGAATTGAAAATAGAAAACATGA
CGTCGAACAAGCCTCCCAAAGTGGACTGACTTTCACATTAGAATGACTTTTCTGCCACATAATGATGCTTAACGGCTGAT
ATAAAACTCTTCCGCTCTATGTCGCCATTATTTTAGCATTATGTAGCAAAAAAGACAAGTTGACTGCTTAAATGGAAATT
TGACTTAATAACCGACATCGTTGCGTAACACCAACTTGGCGAACGTTTGACCTAAAATCTTAGAAAAATTCAAGCGCGTA
CATTTTCTTCTCTCTCTTCATCCTAGCTGCGGAATGTAGCTTAAGCAGAAAATATGCTATTCTTTGTTAGACTTAAATTA
AATAACGATCAATTTTGAATCATATTCTTATTCACCTAATTTAAGTTTTCAAGTGCTTTTCATTATTTCAATTTTTTTCT
GGTAATGGTTTTCGTAAACATAGGCTTAACAATAAGTGGTAGATGTTAGTGTTTTTATTAGCTTGTAGTCAAATCAATTT
TCAATATTACACCTAATTCGTAACGTAATCAAATCAATTTATTCTCCAATTAGATCAGATTTCATTTTGTAGTGATTAAT
TAAAGATGAATTCTTGGTATCTTCACGCGGGCCAGGGTTATGAGAGAGAAGTACTATCAATTACAAGAGAGTGGAAAAAT
TCCGACAAAAAGTTCTCGGGTGGAAACAGTGGAAAACAGAAGTGGGGGAAAATAAGGCAAGAAGAGCAGGTGCCTTATGC
GTCTTTAAAACAATGTAGAGAAAGTAAAAAAGAAGTCGAAAAAATGCAGCACAGACATTGACACAGAAAAAGAGCATGAG
TGATGATTAAGAACCGATACAGTTTTCCGAATCAGATCTAAATACTGATCATCATTTTTTTCGTAGAAGATAGAGAATTG
AACGTCGAGAGACTTGAATACTGTAAAAGAAAACGTAATGTTTAGTGACGAATGAACAGAAGAACAAGAGAAAAGTACAC
TTGTAAGAAGATCGTCACCATTAAGGCGCAGAAGAGAAGAAGAAGATACAAGGAAGATGTAAAAGATAGAGAGAGAAGAC
GAATAAAACAGAGCAGACGTGAAAATCTGTGAAACGAAAA
PEP: 
>AAEL005515-PE
MADQDQEMNGNGQESQDQNGGDQNGAESSNVRDDDRKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDPNTGRSRGFA
FIVYKSADSIDKVVAAGDHVINNKKVDPKKAKARHGKIFVGGLTTEISDEEIKTFFGQFGNIVEVEMPFDKQKNQRKGFC
FITFDSEQVVNELLKTPKQTISGKEVDVKKATPKPDNMHMGGPMGGRGGMRGPPRGGMRGGRGGPGGPKGYGQGWGGQGY
GGGGYGNQGGYGYGDYYGDWAGWGYNGYDYSHYGKFNNHSQKHYH
Swiss-ProtRNA-binding protein squid
KEGG     K03102  SQD; squid     
SUPERFAMILYSSF54928  RNA-binding domain, RBD superfamily     
Gene3DG3DSA:3.30.70.330     
PfamPF00076  RRM_1; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)     
SMARTSM00360     
ProSiteProfilesPS50102  RRM; Eukaryotic RNA Recognition Motif (RRM) profile.     
PANTHERPTHR24012:SF308

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