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Gene detail [Fasta]

Species Culex quinquefasciatus
GeneCPIJ005674
Positionsupercont3.99:547645..553214[GBrowse]
VectorBasehttp://www.vectorbase.org/search/site/CPIJ005674
Gene Expressionhttps://www.vectorbase.org/expression-browser/gene/CPIJ005674
sequence mRNA: 
>CPIJ005674-RA
ATGTACATGGACATCACGCCATGGCAGAAGGAGATTATTATTGTAAATCAATCTCCTTTCCTGGACTACGCCGAGTACGG
CCAGCGTGACATGTTCTTCAACGGTGGCGGCCAGCAGCAGCAGCAGCAGGGCAACCCGCCGTCGGTGTCGCGTCCGCCAA
TGTCCGCCCCGTCGAACTCGTTTCCGCCGATCGGGACGTTTACGCTGGAATCGACCACGGGTGGTTCCGGCCAGCAGGGA
GGTGCTGGCGGCGCCGGCAACAACGTCTTTGGCGGTGGCGGTGACTCGATGGGGAGTGGCCCGATCGGAGTGTTTAACGC
CAGCTCGATGGGCATGGGCGGCGGAATGGGTGGGAATGGCGGAGGGAATGGGCCGAACGGTGGGGGCAGTTCGGGGAACT
CGTACGGGAACAATAGCAGCAGCAGCGGTGGTGGCGGTCAGTCGAATAGCAACGGGGATGCTAACAATCAGGGCACCCGC
GAGACCGGAATCATCGAGAAGCTGTTGATTGGCGACCCGGTTGAGTTCGAGATGACGTACGATCGTCGCACGGGGAAGCC
CATCGCCAGCCAGGTGACGAAGATTGCGCCGGAGGTGGTTCTGTCGGAGGAGCGCGTCACCGGGACGGTTACCACCGAGC
TGAAGACGGAGCTGTCGTTGGCAAGTTCGAGCGACACCACGACCGGCCGGATTAGCTACGAGAATCGGGGCGAGTGCTTC
TTCCTTCCTTATACCAAAGACGACGTCGAGGGGAACGTCACGCTGAGGGCTGGCGACAAGGTCAGCTTTCAGATTGCCAC
CAATCAACGGGGCAACTTGGGAGCCTGCCATATCCGGCTGGAGAATCCTGCCCATCCGGTGAAGTACCGCGGGGTGGTCT
GCTCGATGAAGGACACGTTCGGGTTTATTGAGCGTGCCGATGTGGTGAAGGAGATCTTCTTCCACTTTTCCGAGACGGAC
AACACCATCGAGCTGCGCCCGGGTGACGACGTGGAGTTCATCATCCAGACGAGAAATCAGGGCAAAGAGGTCGCATGCAA
CATTGCCCGCCTGCCGCCGGGCTCGGTCATCTTCGAGGACGTCGACTCGACGATCTACAAGGGCCAGGTGCTCAAATCGC
TCGACCGGAACAACCAGCTGCGCCAACAGAACAACGATCCGCTACCGGGACGAATTAGATATAGGGCTGCCGACCATTCG
GAGGTAGAAGTGCCATTCGGCGACAAGGACCAGAAGGGTGACTTTACCCTGCGCCACGGCGACTGGGTGCAGTTCCTGCT
GGCGACCGATCGCCGCGACCAGCTGCAGCGAGCCACCTCGATCTCGCTGCTGGACGAGACGTTCCAGGTGTCGGGCGAGA
AGCGCGAACAGGGCGTCGTCGCGTCGCTCAAGGAGGGCTTCGGCTTTCTGCGCTGCGTCGAGCGTAACATAAGACTGTTT
TTCCACTTTACGGAGGTGTTGGACACGAGCCGTGAGATCTGCGTCGACGACGAGGTCGAGTTCACCGTCATCCAGGATCC
GGGCTCGAGCTTCGCCAACACGCGCCAGAGCGCGATCCGCATCAAGCACCTGCCGGCGGACACGGTCAAGTTCGAGACGC
TGATCGAGTCGAACGTCGAGGGCGTCGTGTCGCGTGAAGCCCCCAAATCGCCGATCAAGAGCCAGGAGCGCACCGAGGGT
GGCGTCATCTCGTACGGGCCAGGTCCAACCAAAAAGACTATTATGTATTTCTTGAAAGATTGTGATAAAGCACCGCGCGT
TAAACGTAACAAAGAGCTGATTGCCACCAACATTCAAGAGATCACCAACAACCCCCATCAGCTGCAGCAGCAAACTTCGC
TGAACGCCGGCGAGTCCCCGCAGCAGCAGCAGCAGCAACTACTCCAGCAGCAGGTTTCGCTGCAGAACATGCAAGCGCCG
CACTCGCCGAGCATGAACAACGGCAACCGCACCATCGGCGCCAGCAACGCCATGAAGGCCAACTACGCCAACGGCAATAT
CGGCAAGGCCGCCAAGATCCACCACGGTTTCATCGCGGTTCTGAAGGAAAACTTTGGCTTCATCGAAACCATCGAGCACG
ACCAGGAGGTGTTCTTCCACTTTAGCAACTTTATCGGCAACACGTCCGCGCTAGAGCTGGGCCACGAGGTCGAGTACTCG
CTGTCGACGCGCAGTGCCGTCAACGCGGGCAACTGCATCCCGGCCGAGAACGTCAAGATCATCCCGAAGGGTAGCATCCC
GCAGCCGAAGGTGCTGCCGGCCGTGTACAGTGGCGTCGTGCTGCGCCCGCTGCGTTGCATCAACCCGGACCAGCTCGAGT
ACTGCGGGCTGGTGCAGGTGCGCAACGAGGCCGGGGACGGGCTGTCGACGCACGAGTTTGGCATCACCAGCCTGAAGAAC
AAGCGCGACCTGCTGCAGAAGGACGACGTCGTCACGTTCAAGGTCGACGATCAGAACCGTGCGGTGGAGGTCACATCGAT
CCGTACTAAGAAGCAAGCCAAGGTCGACTCCGTCAAGGGTCTGTTCGGTTTTCTGGACTTTGAGGTCGAGGAGGGAAAGA
AGCTCTTCTTCCACATGTCCGAGGTGCAGGGCGGGGGCAGTCTCTACCCGGGCGACTCGGTCGAGTTCTCGATCGTCACA
AACCAGGCAAGTCGCAACGGCAAGACGTCCGCCTGCAACATGATCAAGGTGCCGGACGTGAACGGAATGCGCGCCGAGCG
GCTGCTGTCGCGCATCAAGCTCAACTCGGTCGACGACAGCGGGCCGCGCCTGACGGTGATTCGGGCCCCGAAGGGACCGG
ACGGTACAAAAGGCTTCCAATTTTCAGTCAGAGCTCCACGTTTAGTTGGAATTTGCTTGGAATAA
PEP: 
>CPIJ005674-PA
MYMDITPWQKEIIIVNQSPFLDYAEYGQRDMFFNGGGQQQQQQGNPPSVSRPPMSAPSNSFPPIGTFTLESTTGGSGQQG
GAGGAGNNVFGGGGDSMGSGPIGVFNASSMGMGGGMGGNGGGNGPNGGGSSGNSYGNNSSSSGGGGQSNSNGDANNQGTR
ETGIIEKLLIGDPVEFEMTYDRRTGKPIASQVTKIAPEVVLSEERVTGTVTTELKTELSLASSSDTTTGRISYENRGECF
FLPYTKDDVEGNVTLRAGDKVSFQIATNQRGNLGACHIRLENPAHPVKYRGVVCSMKDTFGFIERADVVKEIFFHFSETD
NTIELRPGDDVEFIIQTRNQGKEVACNIARLPPGSVIFEDVDSTIYKGQVLKSLDRNNQLRQQNNDPLPGRIRYRAADHS
EVEVPFGDKDQKGDFTLRHGDWVQFLLATDRRDQLQRATSISLLDETFQVSGEKREQGVVASLKEGFGFLRCVERNIRLF
FHFTEVLDTSREICVDDEVEFTVIQDPGSSFANTRQSAIRIKHLPADTVKFETLIESNVEGVVSREAPKSPIKSQERTEG
GVISYGPGPTKKTIMYFLKDCDKAPRVKRNKELIATNIQEITNNPHQLQQQTSLNAGESPQQQQQQLLQQQVSLQNMQAP
HSPSMNNGNRTIGASNAMKANYANGNIGKAAKIHHGFIAVLKENFGFIETIEHDQEVFFHFSNFIGNTSALELGHEVEYS
LSTRSAVNAGNCIPAENVKIIPKGSIPQPKVLPAVYSGVVLRPLRCINPDQLEYCGLVQVRNEAGDGLSTHEFGITSLKN
KRDLLQKDDVVTFKVDDQNRAVEVTSIRTKKQAKVDSVKGLFGFLDFEVEEGKKLFFHMSEVQGGGSLYPGDSVEFSIVT
NQASRNGKTSACNMIKVPDVNGMRAERLLSRIKLNSVDDSGPRLTVIRAPKGPDGTKGFQFSVRAPRLVGICLE
Swiss-ProtCold shock domain-containing protein E1
SUPERFAMILYSSF50249  Nucleic acid-binding proteins superfamily     
Gene3DG3DSA:2.40.50.140     
PfamPF12901  SUZ-C; SUZ-C motif     
SMARTSM00357     
ProSitePatternsPS00352  COLD_SHOCK; 'Cold-shock' domain signature.     
PANTHERPTHR12913

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