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Gene detail [Fasta]

Species Culex quinquefasciatus
GeneCPIJ001937
Positionsupercont3.27:378032..389238[GBrowse]
VectorBasehttp://www.vectorbase.org/search/site/CPIJ001937
Gene Expressionhttps://www.vectorbase.org/expression-browser/gene/CPIJ001937
sequence mRNA:
>CPIJ001937-RA
ATGTGTCAGGTTGTTTTCTCTGACCTCTTCGACTGTTCAAGCTGGAATGAGCTGCATCCGCGCGATCCAGCTCTATTTAT
ACTGGCGCCGAGAGTTCTCGGAAGCACCAGTGTTAGAATTGAGGGCAGTATACATGTGCAGTCCAAGGAGGACAAGAGCG
ACTCGGAGAACGAGTCGAGCAACGACAGCAAGAGCGAGTCCGGCTCGTCGGACTCGGAGAGCGAGAGCGGATCCGGCTCG
TCGAGTTCCAGCTCGAGCGACAATGAGGGCGACACCACGGGCGGAACGGCCGCGGACAGCAGCGGCGTCAACACGTCCGC
TGCCAACGACAACGCGCAGGATGGGACGAAGCCGGAGGAGAACGGAAACGACCACCAGGGTGGTTCTGATGCGGAGCAGG
AGGAGGACCAGAGCGAGTCGGTCAGCCGGACGCAGATAAACAATAGCGAAGAGACGAATGATAAGTCGAGGAGCAGCGCG
CAGACCGGCGGTTCCGGAACGGACGATAGCGATGACGACGATGCCGATCGGAGCCAGGAGAACAACCACAACAATAACAA
CAACAGTGGAACCAACAACAATAGCGACTCGGAGGACAGCGGAAAGCCGAGCAACGCTAGCCAGAGTCAGGAGGACGATG
ACGATGATGACGATGGGTCGGCCAGTCATCAGTCGGAGGATGAGGAGCATTCGTCTAAAAGTAGCTACGATGATGAGGAC
TACGCGGCCAACAAGCGACGGAACAATGCCCGGAAGAAGGCTGCGGCGGCGCAAGCCCGGCGAAAGGGTGGCTCAAGCAG
TGCGGCACCGGCCAAGAAGAAGAAGAAGAGCAGCAGCAATCGCTGGAAGTCGGACTCTTCGGAGGAGAGCGAAGATGCCA
GCGACCAGGACAGTTCCGATGAGGATGCCAGCTACGGGGCGGCTCGGAAGGCCGCACCGAAGAAGCGTGCCGCTCCGGCG
CCCAAAGCAAAGCCAAAACCCACGAAGAAGAAGCGTGCGGCGGCGTACTCGTCGGACAGCGGTTCCGACGGGGAACAGTC
CCGGCAGGGTCGAAGCCGGCGGGCAACGGCCGTCAGTTACAAGGAGGCCAGCGGGGATGAAGCAACCGACAGTGACGATC
TGCTCGAGGTCGATCCGGAAGCGGAGGAGGCAGCTGCTGCGGCGGCCGCTGAGGAGGAAAAGTCTGAAACGATCGAGCGG
ATCCTGGAGCAGCGTGTGGGGCGGAAGAGTGCTACCGGAGCCGGTACGACGTGCTATTCGGTGGAGGAGAGTGGCGATCC
GAACGAGGGCTTTAGCGAACGCGCCGACTCGGAGAACGCCGAGCAGCAGTACTTGATCAAGTGGACGGGGTGGTCGTATC
TGCACTGTACGTGGGAGTCGGAGGAAACGCTGAAGGAGCAGCGCGTCAAGGGGATGAAGAAGCTGGAGAATTACATCAAA
CGCGAGCATGACATTGCGTTCTGGCGGAAGCATCAGGCCGGCCCGGAGGACATTGACTATTACGAGTGTCAGCAGGAGCT
GCAGCACGACCTGCTCAAGAGTTACTACAACGTGGAGCGGGTGATTGCGCAGGTTGAGAAGCCCGAGGGGGGATTGGATT
ATCTGTGCAAGTGGGAATCGCTGCCGTACGCGGATTCGACCTGGGAGGATGCCAGTTTGATTGTGAAGAAGTGGGAGCGC
AAGGTGGAGGAGTTCCGAGAGCGAGAGGATAGTCGGAGGACGCCGTCCAAGCATTGCAAGGCCATTCGGAGTCGACCCAA
GTTCCACCACTTGAAGGCTCAGCCGGACTATTTGGGTGTGGATCGAGGGCTTAAACTGCGCGACTACCAGATGGATGGAT
TGAACTGGTTGATTCTGACCTGGTGTAAGGAAAACTCCGTCATTTTGGCCGATGAAATGGGTTTGGGTAAAACCATTCAA
ACGATTTGCTTCCTGTACTATCTGTTCAAGGCGCAGCAACTGTACGGGCCATTCTTGTGCGTTGTTCCGCTGAGTACGAT
GACCGCGTGGCAGCGGGAGTTTGCCATCTGGGCACCGGAGATGAACGTGGTGACGTACCTGGGGGATGTGCCCTCGCGTG
AGATTATTCGGCAGTACGAGTGGTGCTTCTCGAACCAGAAGCTCAAGTTTAACGCCATCCTGACGACGTACGAGATTCTG
CTCAAGGACAAAACCTTCCTCGGCAGCATCAGCTGGGCGGCGCTGCTCGTCGACGAAGCGCATCGACTGAAGAACGACGA
CTCGTTGCTGTACAAAGCGCTGAAGGAGTTCGACACGAATTATCGGTTGCTGATTACGGGAACGCCGCTGCAAAACTCGC
TCAAAGAGCTGTGGGCGCTGCTGCACTTTATCATGCCGGATCGGTTCGAGTCGTGGGACGCGTTTGACCGGCTGTACGGC
AACACGACCAACGACAAGTCATACTGCAAGCTGCACAAAGAGCTGGAACCGTACATCTTGCGGCGCATCAAGAAGGACGT
CGAGAAGAGTCTTCCGGCCAAGGTGGAGCAGATTCTGCGCGTAGAAATGACCTCCATCCAGCGGCAGTACTACCGGTGGA
TCCTCACCAAGAATTTTGACGCGCTGCGCAAGGGCATGAAGGGTTCCATCAACACATTCCTCAACATTGTGATCGAGCTG
AAAAAGTGCTGCAACCATGCACTGTTGACTCGACCGACGGAGTTTGAAACACAAACCAACCAGGACGAAGTGGTCGTTCA
GCTGCTGAAAGGGTCCGGCAAGCTGGTATTGCTGGACAAGCTGCTCTGCCGGCTGAAGGAAACCGGCCACCGGGTGCTGA
TCTTCTCCCAGATGGTGCGCATGTTGGACATCCTGGCGGAGTACCTGCAAAAGCGGCACTTTTCGTTCCAACGGTTGGAC
GGAAGCATCAAGGGTGAGCTGAGAAAGCAAGCACTTGATCACTTTAACGCGGAAGGTTCGACCGACTTCTGCTTCCTGCT
GTCGACGCGAGCTGGCGGTTTGGGCATCAATTTGGCCACCGCCGACACGGTCATTATCTTCGACTCGGACTGGAACCCGC
AGAACGATCTGCAGGCCCAGGCACGAGCGCATCGAATCGGTCAGAAGAACCAGGTCAACATTTACCGACTCGTGACGGCC
AAGTCCGTCGAGGAGGACATTGTGGAGCGAGCGAAGAAGAAGATGGTGCTCGACCATTTGGTCATCCAGCGGATGGATAC
GACGGGACGAACCGTGCTGGACAAGAACGGCGCCAACAACACGGCGAATCCATTCAACAAGGACGAACTGTCGGCGATTC
TCAAGTTTGGCGCTGAGGAGTTGTTCAAGGAGGACGAAGACGGGGATGACGAGTTGGTTTGTGATATCGATGAGATTTTG
AAGCGGGCGGAGACGCGGGACGAAGCGCCGGAAATGCCCGGCGATGCGCTGCTGTCGGCGTTCAACGTCACGACGTTCGA
CTTTGACGAGGAGAAGGAAACGCAGGCGATTCGGAAACCAACCGCGGCGAAAGCGCCAGTGAATGCCGCTGACCAGGAGG
ACACGAAAGACTGGGACGACATCATCCCGACAAACTTCCGGGAGTTGGTTGAGGCTGAGGAGAGGAATAAGGAGTTGAGT
GATTTGTATTTGCCGCCGCGGCGGAAGACACTCCAACAGCTGAACCAAGCGAACGAAGAGGGAGCGGCGGGTGGTGCTGC
CAAGAAGCGGAAGAAGCGCCAGGCTGAAGAGGACAGTGACGAGGAGGAGTCGGACGGGAGTGACGACGTGAAGGCCAGTA
AGAAATCGTCGAGTAGGGGTCGACCTTCGAACAAAGAGAAGATTGGTGGGTTTAACGACACAGAACTGCGGCGGTTCATC
AAGAGTTACAAAAAGTTCCCGGTGCCGTTGAAGCGACTGGAGGCGATCGCGATGGACGCGGAACTGCAGGAGAAGCCACT
GTCGGATTTGAAACGGGTCGCGGAGCTGCTGCAGGAGCGTTGCGTTCAGTTCATGGAACACTCGAAGGAAAACGAGGAAA
AGGAGAAGAACGCCACGGCGGAAGAAAAGGGCAGCAAGCGAGGTCCTCGGGCAGCGTTTTCGATCCGCTTCGGTGGGGTG
TCGTTCAACGTGAAAACGCTGCTGCAGTGCGTGGAGGAGTTGGCCCCGTTGGACGAGTTTCTGCCGGCGGACGCGGACGA
ACGTGCCCGGTGGGTGCTGAACATCAAGACGCGGCCGGCGAACTTTGACTGCGAGTGGAACAATGAGGACGATTCAAGGT
TGTTGCGAGGAATCTACCAGTTTGGCATTGGTTCGTGGGAGGCCATGAAGATGGAGGATTCGCTTGCGCTCGGCGATAAG
ATCTTGCTGAACGACGTCGAGAAGAAGCCGCAAGCGAAACATCTGCAGTCCCGGGCCGAGTACTTGTTGAAGATTATCCG
GAAGAATCTCGAGTTGAAGAAGGGCAACGGGAAGAAGCAGCGTAAGCCGAGGAAGCCCCGGGAGGGAAAGACTGCGATAT
CGGCGGCAATTGTCCACTCGCCGGTGCACTCGGCCAAGGATGAAGGGGAGGAGGGTTCGTCCAACGAGACGGCGGCCGTG
GAGAGTTCGAAGGCCAAGCTGAAGAAGGTCTCCGAGTCGGATGCGCACCATCACGAGCACGATGCTAGTTCGAACGGACC
GAAGGAAGAACACCATCACCCGCACAAGGAGAAGAAGGAGAGAAAAAAGAAGGAAAAGACGAAAGAGGGCAAAAAGAGCA
AGAAGAAGAACACCGGGCCGATGCACTTTACCGCGAATAACGAACCTGCGCAGCTGAACATCATCGGTGACCTGGATCCG
AGCGTGTTCAACGAGTGCAAGGAGAAGATGCGGCCGGTGAAGAAGGCGCTCAAGACCCTAGACAATCCGGATCAGACGCT
GCCACCGCAGGAACAGGTCAACCAAACGAGAGCCTGTCTGCTCGCGATCGGCAACCAAATCAACCAGTGCTTGACGGCGT
TCAAAGATCCGGAGAAGATCAAAGAGTGGCGCAGCAATCTGTGGTACTTTGTGTCCAAGTTTACCGAGTTCGACGCCAAG
AAGCTGTTCAAGCTGTACAAACATGCGCTGAAGCGAAGCGAGGGCGAAGAATCGGGCGCGGCTGCCGGCGGAAGTTCGGA
GAAGAAGAAGGACCATCACCACCACCACCATCATCACCACTCGAAGGAGGGCGGCGGAAGTGCGCAAAACTCCCCCGTCA
AGGACAAGTCGGCGAAGAACGTGCCGGGAACGCCACAGGCGTTGCAAACGCTCGGTAAAATCAAGAAGATCTCCAAGAAG
GACAACGGAAGCCAGAAGGTCAGCATGGAGGTTTCGACGCCGTTGGCCGACCGCGAGAAGGAGAAGGTTCCGATCGAGAG
GCGCGAGCGCAAGGAGAAGAAGCGACATCACCAGGGCGCAACGGGAACGCCGGATCGAGGGGCGGCTTCCGGGGACGATC
ACCGGAAGGAACAGCGAGATCGATATCTTGGGCAGGACGGTGGTGGTGCGGGTAGTGAGGAGGACGGTTCTCATGGCGCC
AAGCGCAAGCTCGAAGACGGAGAGTTGGCTGATGAGAACAGCAAGGAGTACAAGCGATTGCACGGCAGCGGTGATGGGCG
CAACAATCGCGATCGGGACAACAAATGGGACGAGTACGGTGATCGGGGCAGAGGCGGCATGGGACGCAACAGTGGTGGAA
TGCCACGTGGTGCAGGAATGTTCCCCGAAGGACGTGGACCGTACCCGGATGACCGGTGGAGTGGTCGTGATAGGTTCAGT
GACCACAAACGGGACCGATACGACGGCTACCATCGGAATGCACCCCCCGGAGGTTACCACCGTGATCACCGAGATCGGGA
CCGGGGTGACCGTTCCTTTAAGGACAAGCGAAGATATCCGCCTGGTGGAGGTTCCAGCTATTACGGAATGCAACCCGGAG
GAGGAGGAGGTGCCCCCGGTGGATACTACCCGCCTGGCGACAGCGGTTCCTACCGTTACGGAGCTTCTGGCGGTGGTGGT
CCCGGCGGAGCGGACTTTATGGACTATCGAGACGGAGGAGGACGCGGACCAGGCCGAGGAGGAGGCGGCGGCGACTACGA
AGGACGAAGGCAACCGCCTCCGCCGCCGGCCAACCCGTAA
PEP:
>CPIJ001937-PA
MCQVVFSDLFDCSSWNELHPRDPALFILAPRVLGSTSVRIEGSIHVQSKEDKSDSENESSNDSKSESGSSDSESESGSGS
SSSSSSDNEGDTTGGTAADSSGVNTSAANDNAQDGTKPEENGNDHQGGSDAEQEEDQSESVSRTQINNSEETNDKSRSSA
QTGGSGTDDSDDDDADRSQENNHNNNNNSGTNNNSDSEDSGKPSNASQSQEDDDDDDDGSASHQSEDEEHSSKSSYDDED
YAANKRRNNARKKAAAAQARRKGGSSSAAPAKKKKKSSSNRWKSDSSEESEDASDQDSSDEDASYGAARKAAPKKRAAPA
PKAKPKPTKKKRAAAYSSDSGSDGEQSRQGRSRRATAVSYKEASGDEATDSDDLLEVDPEAEEAAAAAAAEEEKSETIER
ILEQRVGRKSATGAGTTCYSVEESGDPNEGFSERADSENAEQQYLIKWTGWSYLHCTWESEETLKEQRVKGMKKLENYIK
REHDIAFWRKHQAGPEDIDYYECQQELQHDLLKSYYNVERVIAQVEKPEGGLDYLCKWESLPYADSTWEDASLIVKKWER
KVEEFREREDSRRTPSKHCKAIRSRPKFHHLKAQPDYLGVDRGLKLRDYQMDGLNWLILTWCKENSVILADEMGLGKTIQ
TICFLYYLFKAQQLYGPFLCVVPLSTMTAWQREFAIWAPEMNVVTYLGDVPSREIIRQYEWCFSNQKLKFNAILTTYEIL
LKDKTFLGSISWAALLVDEAHRLKNDDSLLYKALKEFDTNYRLLITGTPLQNSLKELWALLHFIMPDRFESWDAFDRLYG
NTTNDKSYCKLHKELEPYILRRIKKDVEKSLPAKVEQILRVEMTSIQRQYYRWILTKNFDALRKGMKGSINTFLNIVIEL
KKCCNHALLTRPTEFETQTNQDEVVVQLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDILAEYLQKRHFSFQRLD
GSIKGELRKQALDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTA
KSVEEDIVERAKKKMVLDHLVIQRMDTTGRTVLDKNGANNTANPFNKDELSAILKFGAEELFKEDEDGDDELVCDIDEIL
KRAETRDEAPEMPGDALLSAFNVTTFDFDEEKETQAIRKPTAAKAPVNAADQEDTKDWDDIIPTNFRELVEAEERNKELS
DLYLPPRRKTLQQLNQANEEGAAGGAAKKRKKRQAEEDSDEEESDGSDDVKASKKSSSRGRPSNKEKIGGFNDTELRRFI
KSYKKFPVPLKRLEAIAMDAELQEKPLSDLKRVAELLQERCVQFMEHSKENEEKEKNATAEEKGSKRGPRAAFSIRFGGV
SFNVKTLLQCVEELAPLDEFLPADADERARWVLNIKTRPANFDCEWNNEDDSRLLRGIYQFGIGSWEAMKMEDSLALGDK
ILLNDVEKKPQAKHLQSRAEYLLKIIRKNLELKKGNGKKQRKPRKPREGKTAISAAIVHSPVHSAKDEGEEGSSNETAAV
ESSKAKLKKVSESDAHHHEHDASSNGPKEEHHHPHKEKKERKKKEKTKEGKKSKKKNTGPMHFTANNEPAQLNIIGDLDP
SVFNECKEKMRPVKKALKTLDNPDQTLPPQEQVNQTRACLLAIGNQINQCLTAFKDPEKIKEWRSNLWYFVSKFTEFDAK
KLFKLYKHALKRSEGEESGAAAGGSSEKKKDHHHHHHHHHSKEGGGSAQNSPVKDKSAKNVPGTPQALQTLGKIKKISKK
DNGSQKVSMEVSTPLADREKEKVPIERRERKEKKRHHQGATGTPDRGAASGDDHRKEQRDRYLGQDGGGAGSEEDGSHGA
KRKLEDGELADENSKEYKRLHGSGDGRNNRDRDNKWDEYGDRGRGGMGRNSGGMPRGAGMFPEGRGPYPDDRWSGRDRFS
DHKRDRYDGYHRNAPPGGYHRDHRDRDRGDRSFKDKRRYPPGGGSSYYGMQPGGGGGAPGGYYPPGDSGSYRYGASGGGG
PGGADFMDYRDGGGRGPGRGGGGGDYEGRRQPPPPPANP
Swiss-ProtChromodomain-helicase-DNA-binding protein 1
KEGG     K11367     
SUPERFAMILYSSF54160  Chromo domain-like superfamily     
Gene3DG3DSA:2.40.50.40     
PfamPF13907  DUF4208; Domain of unknown function (DUF4208)     
SMARTSM00298     
ProSiteProfilesPS51192  HELICASE_ATP_BIND_1; Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.     
CoilsCoil
ProSitePatternsPS00598  CHROMO_1; Chromo domain signature.     
PANTHERPTHR10799:SF538

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