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Gene detail [Fasta]

Species Pediculus humanus
GenePHUM474660
PositionDS235817:402494..405480[GBrowse]
VectorBasehttp://www.vectorbase.org/search/site/PHUM474660
Gene Expressionhttps://www.vectorbase.org/expression-browser/gene/PHUM474660
sequence mRNA: 
>PHUM474660-RA
ATGAGGAAGAATAAAATAAAACGTAAAGTTAAAAGAGAAAGAAGTAAAAATGAAAATTCTAGAAAATCTTACGAAGATAT
TGTTAGAGAAAATAAAGATTTTGAAAGTTACTATAAGTTACAAAAAATATGTCCTGAAGAAGAATGGGATAATTTTATAA
AAGCTCTCAAAGAGGATTTGCCAACTGCTTTTAGAATAACAGGTTCTAAAACAGAAGCAAAAACCCTTTTGCAAATCGTT
CAAGGACAATATTTTAAAGATTTTCTCAATGCTAAACAAGATGAAAGCATTAAAGAACCTTTTGCTTTGCCATGGTATCC
TGATAATCTTGCATGGCAATTACAACTTTCTCGTAAAGATATCAGAAGATGTGAAGCATTTTTTAAACTTCATAATTTTT
TAATATCTGAAACAGACAGTGGCAATATTAATAGACAAGAAGTTGTTAGTATGATTCCACCGATAGCTCTAGATGTTAAG
TCTCATCATAAGATTTTAGATATGTGTGCATCTCCTGGTTCGAAAACAGCTCAGTTAATTGAATATTTACATAAAAATGA
TGAAAGGCTTCCTAAGGGTTTTGTTATAGCCAATGATATTGATAATAATAGGTGTTACATGTTAGTTCATCAAGCCAAAA
GACTTAGTAGTCCAAATATAATTATTACCAATCATGATGCTTCTATCATGCCTAATTTTATTATTAAAAATAATGACGGG
GGAGAAAACATTTTAAAATTTGACAGAATTTTATGTGATGTGCCTTGTACCGGAGATGGAACTTTAAGAAAAAATGCAGA
TATTTGGACAAAATGGAACACTGCTAATGGAAATAATTTACATGGAGTTCAATTTAGAATTATTAAAAGAGGTGTTGAAA
TGCTTACAATTGGTGGAAGATTAGTATATTCTACATGTTCATTAAATCCTGTTGAAAATGAAGCTGTTATTGCTAGGTTA
TTGACAGAAGCACAAGGATCACTTAAACTTGTTAATTTGGCACCCCTTCTTCCTGGTTTAAAGTATTTAAAAGGTTTAAA
ATCATGGTTGGTAACGTCTAAAGATGTTAAAGGGTATAAAACATTTGATGAAGTGCCTAAGCAATGGCACACAGTTGTGA
GACCACAAATGTTTCCACCACCTCAAGACATTGTCGATCAATTAAATTTAGATCTTTGCGTGAGAATTCTTCCTCATCAT
CAAGATACGGGAGGTTTTTTCGTCGCAGCGTTGGAAAAAGTCAAAACATTACCTTGGGAAAGTTCTAAAATGAATGATGG
TAACGAAGAAAAGAACAATTCAAATCAAAAAGTTAAAGAACCTAGTAGAAAAAAGAGAAAAATTTTCGGTTATCGTGAAG
ATCCTTTTATTTTCTTTGATGAGAACGAACCTGTTTGGCACGACATTAAAGAGTTTTACGACATAACGAACGAGCTCCCA
GCTCAATGTTTGTTAACGAGATGTAAAGAAGGTAAAAAAAAAAACATATATTTAACGTCACCGGAAGTAAGAGATATAGT
TATTAACAACGCAGAAAGATTTAAAATAATAAATACGGGAGTGAAAACATTTGCAAGATGCGACACAAAAGGAATGAAAT
GTTCTTTCAGATTAGCTCAAGAGGGACTTTGGAGCATATTTCAATTTATCGGTCCTAAAAGAAAAATTTCGTTGACGAAA
AATGATTTACTTTTGTTGCTTGAAAATAACGATCCGAAAAATCCACCGGAAACGGCTAAATTAAATCCTACAACGCAAAA
ATCATTAAATCAAATAGGTGCGGGTAGTTGCGTGTTTGTGTACGATGAAGAACCCGTAACGGATAAATCCTTGCACGTGG
AATTAGCCGGATGGGTTGGCGCCGTGACGACAAGAGTTTATATTCCATTAAGCGATTGCATTCACTATCTCAGGTTATTG
GGAGGAGACACGTCGAAATTTGAAATAAATAAATTTAAAAAATCTGAAGAGGATACAGAGGGCGGTGTAATAATAATAGA
TGATGACAATATGGGTGTGACAACACAAAATGAAAATAAAGAAATTTAA
PEP: 
>PHUM474660-PA
MRKNKIKRKVKRERSKNENSRKSYEDIVRENKDFESYYKLQKICPEEEWDNFIKALKEDLPTAFRITGSKTEAKTLLQIV
QGQYFKDFLNAKQDESIKEPFALPWYPDNLAWQLQLSRKDIRRCEAFFKLHNFLISETDSGNINRQEVVSMIPPIALDVK
SHHKILDMCASPGSKTAQLIEYLHKNDERLPKGFVIANDIDNNRCYMLVHQAKRLSSPNIIITNHDASIMPNFIIKNNDG
GENILKFDRILCDVPCTGDGTLRKNADIWTKWNTANGNNLHGVQFRIIKRGVEMLTIGGRLVYSTCSLNPVENEAVIARL
LTEAQGSLKLVNLAPLLPGLKYLKGLKSWLVTSKDVKGYKTFDEVPKQWHTVVRPQMFPPPQDIVDQLNLDLCVRILPHH
QDTGGFFVAALEKVKTLPWESSKMNDGNEEKNNSNQKVKEPSRKKRKIFGYREDPFIFFDENEPVWHDIKEFYDITNELP
AQCLLTRCKEGKKKNIYLTSPEVRDIVINNAERFKIINTGVKTFARCDTKGMKCSFRLAQEGLWSIFQFIGPKRKISLTK
NDLLLLLENNDPKNPPETAKLNPTTQKSLNQIGAGSCVFVYDEEPVTDKSLHVELAGWVGAVTTRVYIPLSDCIHYLRLL
GGDTSKFEINKFKKSEEDTEGGVIIIDDDNMGVTTQNENKEI
Swiss-ProttRNA (cytosine(34)-C(5))-methyltransferase
KEGG     K15335     
SUPERFAMILYSSF53335  S-adenosyl-L-methionine-dependent methyltransferases superfamily     
Gene3DG3DSA:3.40.50.150     
PfamPF01189  Nol1_Nop2_Fmu; 16S rRNA methyltransferase RsmF     
ProSiteProfilesPS51686  SAM_MT_RSMB_NOP; SAM-dependent MTase RsmB/NOP-type domain profile.     
PRINTSPR02008     
ProSitePatternsPS01153  NOL1_NOP2_SUN; NOL1/NOP2/sun family signature.     
PANTHERPTHR22808:SF1
OrthologiGroup-00893    tRNA (cytosine(34)-C(5))-methyltransferase      

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