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Gene detail [Fasta]

Species Pediculus humanus
GenePHUM420000
PositionDS235751:202800..207600[GBrowse]
VectorBasehttp://www.vectorbase.org/search/site/PHUM420000
Gene Expressionhttps://www.vectorbase.org/expression-browser/gene/PHUM420000
sequence mRNA: 
>PHUM420000-RA
ATGGATTTAGTAGTTGATTTACCTTTTGGAGTTCCTCCAATATTACCCGATGTTGGAAAACAGTTACAAGAATATATTTT
ATGTCCTGATAAATTACCCATTCACAATTTTGAAACATCTCAGCAACATTGGGATGAAGAACCTGATACCTCTGCTCTGT
ACTTAAGTGATTTATCTGAAAATAGCACTATTTTAAAACTTGACCGAGATTTAAGAAGCGGTGAATTAAGATCTTTTACA
GAAGTTCTCTGTAATGGAGATTCTTTACCTACGATAAATAAAGAAGAACAATCCAAAACTATAGATGATATTATAGAAGT
TTTAGAAAATGTTGGTGACGTTATAGAAACTGAAGAAAATGAAAAGTCAGTTAAACAAAATGAAACAAGTGATTCTAACT
TCATTAATTTAGTCGACTTATTAAAGGGTGGTCAACATTTATTAGAAGTAACCAATAGTTCTTTTGAACTTGAAAACGAA
GAAGATAAACATGAAAATAAAAATGATACGGAAGAAATATCAGTTGAAGAATCAGATGTGATAAGCAGTATTCCAAATGA
AGTAGCATTCAAAGCTCCAGTTATAAGATTGTCAGATGTTACCCCATTAAAAGGGGTAACTTCTACAGAATGGGCAGAGG
TAATTGATGTTAGCCTACCTGTCACAGATTTTTATGAAAAAATCCCAGATATGGCCTTTAAATACAATTTCGAACTTGAT
ACATTTCAGAAACAGGCTATCTTAAAATTAGAAGAGCATTGTAGTGTTTTGGTAGCTGCTCATACTTCAGCTGGTAAAAC
AGTCATTGCAGAATATGCCATTGCATTATCTCAGCGTCATATGACCCGTACCATTTACACTTCCCCAATTAAGGCTTTAT
CAAATCAAAAATATAGAGATTTTAGAAATACTTTTAAAGATGTAGGACTCATTACAGGAGATTTTCAAGTAAATCAGACA
GGAACATGTCTTATAATGACTACAGAAATTTTAAAATCCATGTTATTAGCACAAAATGATATCATTAGAGATTTGGAATA
TGTAATTTTTGATGAAGTACATTACATAAATGATTTTAAAAGAGGACATGTGTGGGAGGAAGTTGTCATTTTACTTCCGT
CGCATGTGAGCATTGTAATGCTTAGTGCAACAGTTCCAAACACTTTGCAATTTGCCGATTGGGTAGGAAGAACTAAACAA
CAAAAAATGTATGTTATTAGTACTACTCAAAGGCCTGTTCCTTTAGAACATTTTCTATACACTGGATCTGGAGGAAATAG
TAAAGATGAAAGATTTTTAATTTTATCAGCTACAAATGAATTTCAAAAAAAAGGATATTTAGAAGCTGTTGAAGCCAAAA
AAAAAAGAGAAAGTAAACAAAAAAATGTTGTAAAAGAAAGACCACAAACAGGAAGAAAACAAGACACAACTATGTGGGTA
GCATTAATAGAACACTTACAAAAACATGATAAGTTGCCTATAGTGGCATTTATTCTTTCTCAAAAGAGATGTGATGAAAA
TGCTAGTAGCTTAATGTCAGTGGATTTAACTACAGCCAAAGAAAAATCACATGTACGACATTTTTTTCAACAGAGTATTC
AAAAATTGAAGGAGCCTGATCAAACTTTGCCTCAAATACTCAAAATGCAAAAACTACTTGAAAATGGAATTGGAATTCAC
CACAAAGGCATATTACCTATTCTAAAAGAAATAGTTGAAATGCTTTTTCAAGAACGATGCGTAAAAATTCTGTTTGCTAC
TGAAACATTTGCAATGGGAGTAAATATGCCAGCTAAAACGGTTGTTTTCGATTCGATACATAAATACGACGGATCTGAAA
AAAGAATGCTTTTGCCATCCGAATATATTCAAATGGCTGGAAGAGCAGGCAGAAGAGGGCTCGATAAAACAGGAACCGTT
ATTATAATTTGTAGAGAGGACATGCCAACTGAAAATAATTTAATACAATTAATGAAAGGTATACCAAAAAAAATTGAATC
ACAATTTCGTTTAACCTATTCTGTAATTTTAAAACTTGAGAGGAAAAAAATCGTGGCAGAAGGAAGAGTAACCGTGGAAG
AAATGATGGCAAACAGTTTTAAAGAAGCCGATCATATAATAAAAAAGAAAACGTACACGCAATCTTTGGAACAAGTAGAA
AATAATTTATCAAGTTTAGAAAAAACAATTGAAAAGAATAATGTATGGGAAGAAGTCCGAGACAGTTGTTCCATACTCTT
AGACTATATAAAAAATTGGGCAGTTTTGAGTTCAAAAATTTTTACCGATAAGAAAGGATTAAAACTTGTAACTCCCGGTC
GTGTTGTTTTACTTACTCATAAATCTCACATAAATAAATTAGGAATTATATTGTCTTGCGAATATAAAAAAAATGTTAAA
TTTAAAGTTTTAGTACTGGATAATAAAATTGACAAATCAAAAGACAACTCAGAGACTGATAAAGACTTTAAATCAATTGA
GAATGAATGGTATAAACTAATTGGCTTATTAAATTTAAATAAAATATTTGTACCCGACGATTTGGGCGTTCATACTGTCA
TAACTATTGACGCTTCGGATATTTTCGAAGTAACAACTATTCTATTGAAAATAGACTCTAAAATAATTTTATCAGATTGG
GATAATAGGCAAATCCCTAGATTTCGAGATAATCCACCTGGGCAAACATTTCAAAGAGTTTTGGAAGAATTAACGGAAAT
AACTCACACTTATGCTAATTCGGAAGAGAAAATTGAATATTTAAATTTATTAAAAGATTTTAAAATAAGTAGCAAAGAAG
ATTTTAAAAATTTCCACGAGTTGGTCAAATTAAAAACAAAAGTTTGCGAAAGTAATACTTTAACTGATCATGAGCAATTG
AAAAAATTTTTCAAACTTTTATGTTTGGAAAAAAAGAAAGAAAATTTAAAATTTTTGCTGTCGTATCAAAGTATGTCTTT
GTATTCCGATTACAAAAGCAGATTAGCCGTTTTAAAAATGTTGAATTATCTTGACAGTAAAAATTCAGTTCAAATGAAAG
GGAATGTTGCTTGCGAAATGAGCAGTCAAGAACTTCTCATTACAGAATTAGTATTTAGAAATGCTTTGAACGATTTGCAA
CCACCGGAAATAGCGGCATTATTATCTTGTTTCGTTTATCAAGGGAAAAAAAAAAATGAACCACTTCAACTAACGGCTAC
CCTAGAAGCAGGAATTGCAAGAATAAAAAAAATAGCCAAAGATGTTTTTGAAGCAGAAGAGATATGTGGTGTAAATCAGG
CAGAAGCAACGGGAAATGAAGAAAACATGAATTTCGATTTAGTTCCAGTAGTTTATGAATGGGCTAGAGAAAAGCCTTTT
GCACAAATTATGACATTAACTGATGTCCAAGAAGGTATTATAGTTCGTTGTATACAACAGTTAAATGAAACAATCAAAGA
AGTGAAAAATGCAGCGAAAATTATTGGAGAACCCACATTACAACAAAAAATGGAAGATGCATCCAATGCAATAAAAAGAG
ACATTGTTTTTGCAGCTAGCCTTTACATGCAGTAA
PEP: 
>PHUM420000-PA
MDLVVDLPFGVPPILPDVGKQLQEYILCPDKLPIHNFETSQQHWDEEPDTSALYLSDLSENSTILKLDRDLRSGELRSFT
EVLCNGDSLPTINKEEQSKTIDDIIEVLENVGDVIETEENEKSVKQNETSDSNFINLVDLLKGGQHLLEVTNSSFELENE
EDKHENKNDTEEISVEESDVISSIPNEVAFKAPVIRLSDVTPLKGVTSTEWAEVIDVSLPVTDFYEKIPDMAFKYNFELD
TFQKQAILKLEEHCSVLVAAHTSAGKTVIAEYAIALSQRHMTRTIYTSPIKALSNQKYRDFRNTFKDVGLITGDFQVNQT
GTCLIMTTEILKSMLLAQNDIIRDLEYVIFDEVHYINDFKRGHVWEEVVILLPSHVSIVMLSATVPNTLQFADWVGRTKQ
QKMYVISTTQRPVPLEHFLYTGSGGNSKDERFLILSATNEFQKKGYLEAVEAKKKRESKQKNVVKERPQTGRKQDTTMWV
ALIEHLQKHDKLPIVAFILSQKRCDENASSLMSVDLTTAKEKSHVRHFFQQSIQKLKEPDQTLPQILKMQKLLENGIGIH
HKGILPILKEIVEMLFQERCVKILFATETFAMGVNMPAKTVVFDSIHKYDGSEKRMLLPSEYIQMAGRAGRRGLDKTGTV
IIICREDMPTENNLIQLMKGIPKKIESQFRLTYSVILKLERKKIVAEGRVTVEEMMANSFKEADHIIKKKTYTQSLEQVE
NNLSSLEKTIEKNNVWEEVRDSCSILLDYIKNWAVLSSKIFTDKKGLKLVTPGRVVLLTHKSHINKLGIILSCEYKKNVK
FKVLVLDNKIDKSKDNSETDKDFKSIENEWYKLIGLLNLNKIFVPDDLGVHTVITIDASDIFEVTTILLKIDSKIILSDW
DNRQIPRFRDNPPGQTFQRVLEELTEITHTYANSEEKIEYLNLLKDFKISSKEDFKNFHELVKLKTKVCESNTLTDHEQL
KKFFKLLCLEKKKENLKFLLSYQSMSLYSDYKSRLAVLKMLNYLDSKNSVQMKGNVACEMSSQELLITELVFRNALNDLQ
PPEIAALLSCFVYQGKKKNEPLQLTATLEAGIARIKKIAKDVFEAEEICGVNQAEATGNEENMNFDLVPVVYEWAREKPF
AQIMTLTDVQEGIIVRCIQQLNETIKEVKNAAKIIGEPTLQQKMEDASNAIKRDIVFAASLYMQ
Swiss-ProtHelicase SKI2W
KEGG     K12599  SKI2, SKIV2L; antiviral helicase SKI2 [EC:3.6.4.-]     
SUPERFAMILYSSF52540  P-loop containing nucleoside triphosphate hydrolases superfamily     
Gene3DG3DSA:3.40.50.300     
PfamPF00270  DEAD; DEAD/DEAH box helicase     
SMARTSM00487     
ProSiteProfilesPS51194  HELICASE_CTER; Superfamilies 1 and 2 helicase C-terminal domain profile.     
CoilsCoil
PIRSFPIRSF005198     
PANTHERPTHR11752:SF62
OrthologiGroup-00882    Helicase SKI2W      

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