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Gene detail [Fasta]

Species Pediculus humanus
GenePHUM289860
PositionDS235274:77845..84289[GBrowse]
VectorBasehttp://www.vectorbase.org/search/site/PHUM289860
Gene Expressionhttps://www.vectorbase.org/expression-browser/gene/PHUM289860
sequence mRNA:
>PHUM289860-RA
ATGGATTGGGTAAAAGATAGCACGTTGTTACTTTTTGTTTTCTTCGTGATTTTGCATTCTGGAGTGTCTCAAATTTTTCC
TTCTAATATTCCGGAGGATTCAATACGTCAAGGAGATCAAAATTATCAATTTTTTTCGCAAGGGAATTCCTTAGGGCAAA
ACAGTAATTATCAAAACCCATATTGGAACGGGCAAAATTCTAATCAAAATGCAAATTCTTACTATCAGAATCCAAACTCC
AATTGGCCTGGTCAATCTCCAAGAACATATTGGGAGCAAGATTCGTTATTTAATAATAGCGTCATCATACGAGAAGCAAC
GTATTTTATCGTAGCCGGAAAAATAGTGAGGCCAGGCACTATTTACAGAATAGCAGTTACTGTACTGCAGGCGCCAGTGC
CTTTAATTGTCAGAGCTAACATTCAAAGAAACGGAGTCCAACTGACCGCTGATAGTAAAGATGTAAAAGAAGGAATCCCT
GAAACTTTATTACTGAGAATGCCTCGAACCATTGTTCCCGGTCATTATAAGCTTCGAGTCGAAGGAACGTACGACAGCTT
ACAAGGCGGCACCGCATTTATAAATGAAACGACTCTAACATTTTCTCAAAGATCGATGACAATATTTATTCAAACCGACA
AACCAGTTTACATGCAAGGGCAAACAGTGAGATTTCGTTCGATACCCATTACGACAGAGTTGCGTCCTTTTGATGATTCC
GTTGATGTTTTCATGTTGAACCCCAACCGACACATAATGCGGCGATGGCTGTCGAGGCAATCTAATTTAGGAACCGTAAG
TTTATCTTACCAGCTTTCAGATCAACCGGTTTTCGGAGAATGGACAATTCAAATAGTAGCTCAGGGACAAATCGAAGAAG
GGAAATTTTTAGTAGAAGAATATTATCAAACTAGATTTGAAGTCAATGTGACCATGCCTGCGTTTTTCTTCGAATCCGAT
AAATATATATACGGAACCGTTATGGCAAATTATACGAGTGGGGCTCCCGTAAGGGGTAATCTCACTTTGAAAGCAAGCAT
TCGTCCGATAAAAACTTATGGACACGGTCAAAGAGCTAAACCAATCGTTAAATATTTTACATTTGATGAATCTTATCCAT
TTTGGTTTCCCAGACCCCAAAGTAATTATTATTACTATCAAGAAAATAATAATTACAACAGTTACTACGGAGGAAACTTG
CCTTATTTGACATTTTTTAACGGAGTATACCATTTTAAATATCCCATGTCTGAATTGGTCAATAGTGGAATTTCACTCGA
TGGAGTTGAAATAATGGTTACAGCTACAGTGGGAGAAAGATTTTTAGAAGAAGTTATTGAAGGATTTTCAACTGCGAGAA
TATATAATTCCTCGATTAAAGTCACTGTTCTGGGGGGTTCACCTCAAGTTTTCAAACCGACGATGCCTTTTGCATTATTC
ATAGCCGTCTCCTTTCAAGATAATTCACCGCTACCTTTAGAAAGGTTGCAAGCAGGTCGGTTAGAAGTTCAAGCCGCGGT
TGGAATGAAATCGGGTAGACAAAGAATTATCAATTTTGATACTCCTGAAGATTTAAGAATGTCGAGTGAATACAGCGGAG
TTTGGGAGCTTGATGTTGATTTAAAATCTGAATTATCGCTGGGAGAAAACAGAATAAGCAGAGATATTTTAAATAGCATT
TATTCAATAAATCTGAAAGTTTTCTATCGGGATTCTCTTGGACAGGACGCCGGGACTGATGCATATCTTACGACTCATTA
TTCACCTCATAACAGACATATTAAAGTCACCAGTTCAACGCAACATGCTCGGGTGGGAGAGTATTTTGTTTTGCACGTGC
AATCTAATTATTACATGGATACTTTTAATTATATGTTAATGTCTAAGGGAATGATATTGTTAACCGGACAAGAAAATATG
AAAGCAACCGTTAGAACTTTTGCGATACCCTTAAGTGCCGAAATGGCACCAGAAGCCACAGTTGTCGTGTATAACGTGGG
ACTCAATGGAGATGTTTCTGCTGACAGTTTGACATTTCCGGTTAACGGAATTTCTAGAAATAATTTTACAATTTTCATTA
ATAATCGTAAAGCAAGAACTGGTAAAAAGGTTGAGATTGCCATTTACGGTGAACCAGGAGCTTACGTCGCTCTCTCTGGT
ATAGATAAATCATTTTACGCCATGCAAGCAGGAAATGAATTGACTTATTCGAAAGTTATCGATTCCATGTCGCGCTTTGA
TGAAGATACAAATGGAACTTTTAAGTTTTCATGGCGCAATCACGAAGGCAATCCTGATGACAACGTTTATTTTCCCTCAA
ATACTTTTGGCATCGATGTTAATCGGACTTTTGAATATGCTGGGTTAATTGTATTCAGCGATGCAACTTTATCCAGAATT
TCTAATTTCTGTGACTCTTCTCTTGGTTATTTGGAATGTTTAAGCGGAGGTTGTTATCATATATCAACTAAGTGTAATAG
TCATAAAGATTGTCAAGATGGCTCCGATGAAAGTGGATGTCCATCATTTAATGTTACGGACTTAATGCTGTTCAGAAAAC
ATAGATTTAGTAGAATACAAAGACAATATGAAAATGTCTGGTTATGGGAAGATATTAATATCGGACCTCACGGAAGGTAC
ATTTTTGATTTGCCTGTACCCAGGCGACCTGCACACTGGATCGTTTCTGCTTTTAGTATGAGTCATTTGGTTGGTTTTGG
CATGCTTCAAAAACCGATAGAATATGTTGGTGTACTACCCTTTTTTATTGAAGTTGAAATGCCTACCACTTGTTCTCAAG
GGGAACAAATTGGTATTCGAGTCGCCGTTTTTAATTACCTTACAACTGACATGGAAGCAACGGTTATTCTAGCCGGTTCG
GATGATTATAAATTTGTTCACGTAGAACAAGATGGTATCGTCAGATCTTACAATCCGAGAACTTCGTTTGGAGAGCATCA
ATTCTTTGTTTACATACCAAAACAGGATGCGGTTACTGTATACATCCCTATTGTTCCAACAAGATTGGGGGACATAGACG
TAACAGTGTTCGCTGCCACTTTAATCGGTAGAGATACCATTACAAAAAGACTGCATGTGAAAGCCGACGGACTTCCACAA
TATCGTCATCAATCTATTTTACTAGATCTCAGTAATCGTGCTTACGTTTTCCAATATCTTCACGTGAATGTCACTGATAC
ACCGATAATTCCTTATTCGGAAGATAGATATTATGTTTTCGGCTCCAATAAAGCATATGTTTCAATCGTTGGAGATGTTG
TCGGACCGATATTTCCCACCATGCCAGTCAACGCATCTTCTCTCCTGTACCTTCCCATGGATTGCGCGGAACAAAATATT
TTTAGTTTTGCCGCCAATCTTTACACTACGTTGTACATGAGATACGTTAATCAAAGAAACAAAACCCAAGAAAAAGAATC
TTTTTTCCATATGAACGTTGGTTATCAAAAACAGTTGTCATATATGAATCCTGACGGTTCATTCAGCTTTTTCAGAACAG
ATTGGAATCAGTCATCGCCAAGTGTTTGGTTGACTGCATTTTGTGCTCGAATATTTCAAGAAGCGAGTTTTTACGAATGG
GAAAATTTTATTTATATTGATCCTCAAGTTATTTCCAAAGCCGTGTCCTGGGTATTAGATCATCAAACTTACGAAGGTTC
ATTTTACGAAGTGACTTGGTTACCAGACAGAAAAGCAAACACGTCTTCATTTTGGCCCAATGACTACCTGGGTTCCCGGA
ATATCACATTAACCGCTCACGTACTAATTATGTTGGATACCGTGAAAGATTTATCGGGGGGTTTAGGATCCAGAGTTTCC
CTGGCTCAAACAAAAGCAATGAAATGGCTCGAGAAAAATTTAAAATTAATTAACGAAAGCGGAGATCCTTATGAAGTAGC
TCTCGTTGCTTATTCGTTATTGCTAAGTAAATCTGCTTCTGCAGAATCAGCTTTTGGTATTCTTGCTCGTCACGCCAGAT
CAGAAGGTGGCTTCACTTACTGGGGAAAAGAAGCTTTGCCGCCACCGCCGACAAAAATAGAAAATCAAAAAGTTTTCTCT
TTGCCAAGGCTTCCTTACAAGTATGATTCTAGTAATATAGAAGCTACCAGTTACGCTTTGCTAGTTTACACGGCAAGACA
AGAATGGATGATGGATGAAATCGTCAATTGGTTGAATGCCCAAAGGTTAACCGATGGCGGTTGGGCTTCCACTCAGGACA
CTGCCGTCGCAATGAAAGCTCTGATCGAATACACTAATAGAAAAAGAATTAGGGAGGTATCTTCTTTAACCGTGACCATA
GAAGCGACGGCTCTTCCCGGTAAAGTGGTAACTCTTCAAGTGAACGATCAAAATCGTGCTCGGTTACAAAAGTTGGAAAT
CCCTCGCGCATGGGGTACTGTTAAAGTGCAAGCCAAAGGAGCTGGTTACGCCATTTTGCAAATGACGGTTCAATATAATG
TTGATATACCAAAATTTCAAACCGAACCCCCCGTACGAGCCTTCGATTTAAGAACAAGAGCCAACTTTCACGGAAGGAAT
CAATCTCACATTACTTACAGGTGTTGTCAAAGATGGACGTATCTCGAAGAATCAGCTCGATCGGGAATGGCGGTGCTCGA
TGTGACAATTCCGACAGGGTATATAATTCAACAACAGGATTTGGATGCTTATATTTTATCTCGACGCGTGAGAAATTTAC
AAAGGGCACGATTTTTGGAAAGAAAAGTTTTGTTTTACTTTGATTACCTCGATAATTACGATACGTGCGTTGATTTCACA
ATTGAAAGATGGTACCCGGTAGCAAACATGTCACGATACCTTCCCATCAGAGTTTACGATTATTACGCTCCCGAAAGATT
TAACGAAACCATTTTCGATTCTTTGCCGACGTACATTTTAAATATATGCGAAGTGTGTGGGAGCAGTCAATGTCCATATT
GTCCGATTTATAATTTTGCTTCCTTTCTACGAGCTTCATCTTTCGTCGTGATTTTGTCAGCCCTCGTGGTTTTATATCGA
ACCTTTTTTCAAACTAATGTGAAAATCACGTGA
PEP:
>PHUM289860-PA
MDWVKDSTLLLFVFFVILHSGVSQIFPSNIPEDSIRQGDQNYQFFSQGNSLGQNSNYQNPYWNGQNSNQNANSYYQNPNS
NWPGQSPRTYWEQDSLFNNSVIIREATYFIVAGKIVRPGTIYRIAVTVLQAPVPLIVRANIQRNGVQLTADSKDVKEGIP
ETLLLRMPRTIVPGHYKLRVEGTYDSLQGGTAFINETTLTFSQRSMTIFIQTDKPVYMQGQTVRFRSIPITTELRPFDDS
VDVFMLNPNRHIMRRWLSRQSNLGTVSLSYQLSDQPVFGEWTIQIVAQGQIEEGKFLVEEYYQTRFEVNVTMPAFFFESD
KYIYGTVMANYTSGAPVRGNLTLKASIRPIKTYGHGQRAKPIVKYFTFDESYPFWFPRPQSNYYYYQENNNYNSYYGGNL
PYLTFFNGVYHFKYPMSELVNSGISLDGVEIMVTATVGERFLEEVIEGFSTARIYNSSIKVTVLGGSPQVFKPTMPFALF
IAVSFQDNSPLPLERLQAGRLEVQAAVGMKSGRQRIINFDTPEDLRMSSEYSGVWELDVDLKSELSLGENRISRDILNSI
YSINLKVFYRDSLGQDAGTDAYLTTHYSPHNRHIKVTSSTQHARVGEYFVLHVQSNYYMDTFNYMLMSKGMILLTGQENM
KATVRTFAIPLSAEMAPEATVVVYNVGLNGDVSADSLTFPVNGISRNNFTIFINNRKARTGKKVEIAIYGEPGAYVALSG
IDKSFYAMQAGNELTYSKVIDSMSRFDEDTNGTFKFSWRNHEGNPDDNVYFPSNTFGIDVNRTFEYAGLIVFSDATLSRI
SNFCDSSLGYLECLSGGCYHISTKCNSHKDCQDGSDESGCPSFNVTDLMLFRKHRFSRIQRQYENVWLWEDINIGPHGRY
IFDLPVPRRPAHWIVSAFSMSHLVGFGMLQKPIEYVGVLPFFIEVEMPTTCSQGEQIGIRVAVFNYLTTDMEATVILAGS
DDYKFVHVEQDGIVRSYNPRTSFGEHQFFVYIPKQDAVTVYIPIVPTRLGDIDVTVFAATLIGRDTITKRLHVKADGLPQ
YRHQSILLDLSNRAYVFQYLHVNVTDTPIIPYSEDRYYVFGSNKAYVSIVGDVVGPIFPTMPVNASSLLYLPMDCAEQNI
FSFAANLYTTLYMRYVNQRNKTQEKESFFHMNVGYQKQLSYMNPDGSFSFFRTDWNQSSPSVWLTAFCARIFQEASFYEW
ENFIYIDPQVISKAVSWVLDHQTYEGSFYEVTWLPDRKANTSSFWPNDYLGSRNITLTAHVLIMLDTVKDLSGGLGSRVS
LAQTKAMKWLEKNLKLINESGDPYEVALVAYSLLLSKSASAESAFGILARHARSEGGFTYWGKEALPPPPTKIENQKVFS
LPRLPYKYDSSNIEATSYALLVYTARQEWMMDEIVNWLNAQRLTDGGWASTQDTAVAMKALIEYTNRKRIREVSSLTVTI
EATALPGKVVTLQVNDQNRARLQKLEIPRAWGTVKVQAKGAGYAILQMTVQYNVDIPKFQTEPPVRAFDLRTRANFHGRN
QSHITYRCCQRWTYLEESARSGMAVLDVTIPTGYIIQQQDLDAYILSRRVRNLQRARFLERKVLFYFDYLDNYDTCVDFT
IERWYPVANMSRYLPIRVYDYYAPERFNETIFDSLPTYILNICEVCGSSQCPYCPIYNFASFLRASSFVVILSALVVLYR
TFFQTNVKIT
Swiss-ProtCD109 antigen
SUPERFAMILYSSF57424  LDL receptor-like module superfamily     
Gene3DG3DSA:4.10.400.10     
PfamPF01835  A2M_N; MG2 domain     
SMARTSM00192     
ProSiteProfilesPS50068  LDLRA_2; LDL-receptor class A (LDLRA) domain profile.     
PANTHERPTHR11412
OrthologiGroup-00802    CD109 antigen      

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