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Gene detail [Fasta]

Species Pediculus humanus
GenePHUM268230
PositionDS235250:65105..71700[GBrowse]
VectorBasehttp://www.vectorbase.org/search/site/PHUM268230
Gene Expressionhttps://www.vectorbase.org/expression-browser/gene/PHUM268230
sequence mRNA:
>PHUM268230-RA
ATGGCGACGTCCGATTCCAAAGCCCCTCTTCGTTCTGTGAAGAGGGTTCAATTTGGAATACTTTCTCCAGATGAAATACG
TCGCATGTCAGTTACTGATGGAGGGATCAAATATCCTGAAACATATGAAGGTGGTCGCCCAAAAATTGGGGGTCTTATGG
ATCCCCGTCAAGGAGTCGTTGACAGAATGTCTCGATGTCAGACTTGTGCGGGAAACATGACAGAGTGTCCAGGTCATTTT
GGGCACATAGATTTAGCAAAACCAGTCTTTCATGTTGGTTTTTTAACAAAAACTATTAAAATACTACGTTGTGTTTGTTT
TTTTTGCTCAAAACTATTAGTTAGTCCGAATAATGCAAAAATTAAAGAAATTGTGACGAAATCTAGAGGTCAACCTAGAA
AAAGATTAACTTTTGTATATGATCTTTGTAAAGGAAAAAATATATGTGAAGGTGGTGATGAAATGGACATTACCAAAGAT
AATGCTGATAATCCTGATAACAGCAAAGATAAAAAAGGTGGTCATGGGGGTTGTGGAAGATATCAGCCTAACATTAGAAG
AACTGGATTAGATCTCACTGCTGAATGGAAACACACAAATGAAGATAATCAAGAAAAAAAAATTGCATTAAGTGCTGAAA
GAGTATGGGAAATATTAAAACACATAACAGATGAAGAGTGTTTGATTTTGGGTATGGACCCTAAATTTGCTAGGCCGGAT
TGGATGCTAGTAACTGTTCTGCCAGTTCCTCCACTGAGTGTCAGACCTGCTGTTGTTATGTATGGTTCGGCTAGAAATCA
AGACGATTTAACACATAAGTTAGCAGATATTATCAAAGCAAATAATGAATTAATTCGTAATGAACAAGCCGGTGCTGCCG
CACATATAATATCTGAAAATATAAAAATGTTGCAATTTCATGTTGCCACACTTGTGGACAATGACATGCCAGGAATGCCA
AGAGCAATGCAAAAGTCAGGCAAACCTCTTAAAGCATTAAAAGCCAGATTAAAGGGTAAAGAAGGAAGAATTCGTGGCAA
TTTAATGGGAAAGCGTGTTGACTTTTCAGCTCGAACAGTAATTACACCTGATCCAAATTTGAGAATTGATCAGGTAGGAG
TACCAAGATCGATTGCTCAAAACCTTACATTTCCAGAAATTATAACTCCTTTTAATATTGATAAAATGCAAGAACTGGTC
AGAAGAGGAAATTCACAATATCCCGGAGCAAAATATATTATAAGGGATAATGGAGAAAGAATTGATTTGAGATTTCATCC
AAGACCTAGTGATTTGCATCTTCAATGTGGATATAAAGTTGAAAGGCATATTCGAGATGGAGATTTAGTAATTTTTAATC
GTCAACCCACACTTCACAAAATGAGTATGATGGGTCACAGAGTTAAAGTTTTACCTTGGTCAACATTTCGTATGAATTTA
AGTTGTACTTCTCCTTATAATGCTGATTTCGATGGTGATGAAATGAATCTTCACGTTCCTCAATCCATGGAAACAAGAGC
AGAAGTGGAAAATCTTCATGTCACGCCCAGGCAAATTATAACTCCTCAAGCAAATAAACCGGTTATGGGTATAGTGCAAG
ATACACTTACTGCAGTCAGAAAGATGACAAAAAGAGATGTTTTTTTGGAAAAAGAGCAAATGATGAATATTTTGATGTTC
TTGCCCATTTGGGATGGGAAAATGCCCCAACCTGCTATACTTAAACCGAAACCATTGTGGACCGGAAAGCAAGTATTTTC
ATTGATAATTCCGGGTAATGTAAATATGATACGAACGCATTCCACTCATCCTGATGAAGAAGATGATGGTCCGTACAATT
GTTGTGGAGCACGGAGAACTTATTATGGGAATTTTGTGCAAAAGACTTTGGGAACATCCGCCGGCTCTTTACTTCACATA
TGTATGCTGGAATTAGGACATGAAGTTTGTGGCCAGTTTTACGGAAATATCCAAACAGTTATTAATAATTGGCTTCTATT
GGAAGGACACTCAATCGGTATTGGTGATACAATCGCTGATCCTCAAACGTACTTGGAAATCCAGAAAGCTATAAAAAAAG
CTAAAGAAGACGTCATAGAAGTAATTCAAAAAGCTCACAATATGGAACTGGAACCTACTCCTGGTAATACTTTACGGCAA
ACTTTTGAAAATCAAGTGAACAGAATTTTGAACGATGCTCGAGACAAAACTGGAGGTTCTGCCAAAAAATCTTTAACTGA
GTACAACAATTTAAAAGCCATGGTGGTGTCAGGATCCAAAGGATCAAATATTAACATTTCGCAGGTTATTGCTTGTGTTG
GTCAGCAAAACGTAGAAGGGAAACGAATACCGTTCGGTTTCAGGAAGAGAACTCTACCACATTTTATAAAAGATGATTAT
GGTCCCGAATCTAGAGGTTTTGTAGAAAATTCGTATTTGGCTGGATTGACTCCTTCAGAGTTTTTTTTTCACGCCATGGG
AGGTCGTGAAGGTTTAATCGATACAGCTGTAAAAACTGCTGAAACTGGATATATTCAGCGTAGGTTAATAAAAGCTATGG
AATCTGTTATGGTTCATTATGATGGAACTGTTCGTAATTCTGTCGGTCAGCTGATTCAGTTACGATATGGAGAAGACGGT
TTATGTGGTGAAACTGTAGAATTTCAGACATTACCTACAATTAAATTGTCTAATAAAGCGTTTGAAAAACGTTTCCGCTT
TGATGCGACGAACGAAAGATATTTAAGAAGAATATTTAATGAAAATATACTTAAAGAGTTAATGGGTTCGGGAGAAGTGA
TATCATACCTTGAAAAAGAATGGGATCAGTTGCAGAAAGATCGTGAAGCTCTTAGGCAAATATTTCCGAGTGGTGAAAAT
AAAGTAGTATTGCCCTGTAACTTGCAAAGAATGATTTGGAATGTACAAAAGATTTTCCATATTAATAAGCGAGCTCCAAC
TGACTTAAGTCCTCTCAGAGTAATTGAAGGTGTTCGAGATTTGCTACAAAAGTGCGTTATAGTTGCCGGAGAAGATCATT
TAAGTAAGCAAGCCAATGAAAATGCCACTCTTTTATTTCAATGCCTAGTTCGGTCTACTTTGTGTACTAAATGTGTATCT
GAAGATATGAGATTATCTACCGAAGCCTTTGAATGGTTAATTGGAGAAATCGAAACTAGATTCCAGCAGGCACAATGCGC
TCCGGGAGAAATGGTAGGAGCTTTAGCTGCTCAATCACTTGGTGAACCAGCCACACAAATGACTTTAAATACTTTCCACT
TTGCTGGGGTTTCTTCGAAAAACGTAACCCTTGGTGTACCTAGGTTAAAAGAAATAATTAACATCAGTAAAAAGCCTAAA
GCTCCCTCTTTGACTGTTTTCCTTACTGGTGCAGCCGCTAGAGATGCTGAAAAAGCAAAAAACGTTTTGTGCCGTTTAGA
ACACACTACATTACGAAAAGTAACTGCAAACACGGCAATATACTACGATCCCGATCCACAAAACACTGTCATTGAAGAGG
ATCAAGAATTTGTTACAGTTTATTACGAGATGCCTGATTTTGATCCCACAAGAATATCGCCCTGGCTTCTAAGAATAGAA
CTTGATAGAAAAAGAATGACTGATAAAAAATTAACAATGGAACAAATTGCGGAAAAAATAAATGCTGGTTTTGGAGATGA
TTTAAATTGTATTTTCAATGATGATAATGCTGAAAAATTAGTGCTTAGATTAAGAATCATGAATAACGACGAGAAGGTCA
CAGATGAAGAAGAAAATCAAGATAAAATGGAAGATGATATGTTTTTAAGGTGCATAGAAGCCAATATGTTATCTGATATG
ACTTTGCAGGGAATCGAAGCAATTGGCAAAGTTTATATGCACTTGCCTCAAAATGATTCAAAAAAAAGAATTGTAATAAC
CGAAACAGGTGAATTCAAGGCAATCGCGGAATGGTTGCTTGAAACTGATGGAACAAGTTTAATGAAAGTCCTTAGCGAAA
GAGACGTGGATCCGGTTAGAACATATTCTAATGATATTTGTGAAATATTCTCCGTATTGGGTATAGAAGCAGTACGAAAA
TCTGTGGAAAAAGAAATGAATCAAGTTCTTCAGTTTTACGGGCTCTACGTAAATTATCGTCATCTTGCACTTTTATGTGA
CGTCATGACAGCAAAGGGTCACTTGATGGCAATTACTCGTCATGGAATTAATCGACAAGATACAGGAGCATTGATGAGGT
GTTCCTTTGAAGAAACTGTTGATGTTCTTATGGATGCAGCTTCCCACGCTGAATTAGATCCTATGAGAGGAGTTTCGGAA
AATATTATCATGGGACAACTACCTCGAATGGGAACTGACAAATGTAAAGCGGGTATTGAAATTCCCATGTCTATTGGTCA
CGGTATGATGTCAAGCGTAGGAATGATGTTTGGAAATGCTGTTACACCGTCTATGAGTCCTCAAATGACACCTTGGAATC
AAGGAGAAACCCCTGCATATGTAAGTGCTTGGTCCCCACATGCAGGTAGTGGAATGACGCCGGGAGGACCTAGTTTTTCG
CCGTCTGGTTCCAGTGATGCCAGCGGGCTTTCGCCTGGCTACAGTCCGTGGTCTCCTCAACCAGGAAGTCCAAGTTCACC
TGGTCCATCTAATAGTCCATACGTACCTAGTCCTGGCGGGGGCATGTCTCCAAGCTACTCTCCATCCAGCCCCGCTTTTG
CACCAACTTCTCCTAGTATGACTCCGACCAGTTCAAATTACTCTCCTACATCTCCATCATATTCTCCTTCGTCACCTAAT
TATTCGCCTAATTCACCGAGTTATTCCCCTACATCTCCAAGTTATTCTCCCACGTCTCCTAGCTACTCTCCCACATCTCC
CAGTTATTCTCCAACATCTCCAAGTTACTCTCCTACTTCACCTTCTTATTCGCCTACATCTCCCAGTTATTCTCCTACTT
CACCTTCTTATTCGCCTACTTCTCCCAGTTATTCTCCCACTTCGCCTTCTTATTCTCCAACATCTCCGAGTTATTCCCCT
ACGTCTCCATCGTATTCTCCAACATCCCCGAGTTATTCACCTACATCTCCATCTTATTCTCGAACGTCTCCCAGTTATTC
TCCAACTTCGCCTAGTTACTCACCAAGCTCGCCTAACTACACTCCTGCAAGTCCAAGCTTTTCACCTACTTCACCTAGTT
TATATAGCAGTCCTAGATATTCACCTGCCAGTCCCAGTTACTCTCCAGGATCGCCGAAATATTCTCCAACCAGTCCAAGT
TATTCTCCTACTTCCCCGAGTTATGCAAGTGTTTCGCCACAGTACACTCCTACTTCACCTCAATATTCCCCCACATCGCC
AACATACTCTCCTACAAGTCCTAGTTATTCACCATCTTCTCCGAGTCACACTCCGGGTGCTTCCACCAGATATTCGCCCA
CTTCACCTAAATATTCCCCTACTTCCCTTTCTTATTCTCCAGCAAGTCCCCAATATTCTCCTTCAAGTTCTAAGTACTCT
CCCACATCACCTACTTACACTCCAACTTCTCCAGATTATTCAGCCAGTTCTCCAACATACTCTCCCACAGGCCCTCCGAG
TTATTCACCTACTTCACCCACGTATTCTCCGACATCACCTGAATATGATGATCGCTAA
PEP:
>PHUM268230-PA
MATSDSKAPLRSVKRVQFGILSPDEIRRMSVTDGGIKYPETYEGGRPKIGGLMDPRQGVVDRMSRCQTCAGNMTECPGHF
GHIDLAKPVFHVGFLTKTIKILRCVCFFCSKLLVSPNNAKIKEIVTKSRGQPRKRLTFVYDLCKGKNICEGGDEMDITKD
NADNPDNSKDKKGGHGGCGRYQPNIRRTGLDLTAEWKHTNEDNQEKKIALSAERVWEILKHITDEECLILGMDPKFARPD
WMLVTVLPVPPLSVRPAVVMYGSARNQDDLTHKLADIIKANNELIRNEQAGAAAHIISENIKMLQFHVATLVDNDMPGMP
RAMQKSGKPLKALKARLKGKEGRIRGNLMGKRVDFSARTVITPDPNLRIDQVGVPRSIAQNLTFPEIITPFNIDKMQELV
RRGNSQYPGAKYIIRDNGERIDLRFHPRPSDLHLQCGYKVERHIRDGDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNL
SCTSPYNADFDGDEMNLHVPQSMETRAEVENLHVTPRQIITPQANKPVMGIVQDTLTAVRKMTKRDVFLEKEQMMNILMF
LPIWDGKMPQPAILKPKPLWTGKQVFSLIIPGNVNMIRTHSTHPDEEDDGPYNCCGARRTYYGNFVQKTLGTSAGSLLHI
CMLELGHEVCGQFYGNIQTVINNWLLLEGHSIGIGDTIADPQTYLEIQKAIKKAKEDVIEVIQKAHNMELEPTPGNTLRQ
TFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIACVGQQNVEGKRIPFGFRKRTLPHFIKDDY
GPESRGFVENSYLAGLTPSEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGEDG
LCGETVEFQTLPTIKLSNKAFEKRFRFDATNERYLRRIFNENILKELMGSGEVISYLEKEWDQLQKDREALRQIFPSGEN
KVVLPCNLQRMIWNVQKIFHINKRAPTDLSPLRVIEGVRDLLQKCVIVAGEDHLSKQANENATLLFQCLVRSTLCTKCVS
EDMRLSTEAFEWLIGEIETRFQQAQCAPGEMVGALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPK
APSLTVFLTGAAARDAEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQNTVIEEDQEFVTVYYEMPDFDPTRISPWLLRIE
LDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRLRIMNNDEKVTDEEENQDKMEDDMFLRCIEANMLSDM
TLQGIEAIGKVYMHLPQNDSKKRIVITETGEFKAIAEWLLETDGTSLMKVLSERDVDPVRTYSNDICEIFSVLGIEAVRK
SVEKEMNQVLQFYGLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLMDAASHAELDPMRGVSE
NIIMGQLPRMGTDKCKAGIEIPMSIGHGMMSSVGMMFGNAVTPSMSPQMTPWNQGETPAYVSAWSPHAGSGMTPGGPSFS
PSGSSDASGLSPGYSPWSPQPGSPSSPGPSNSPYVPSPGGGMSPSYSPSSPAFAPTSPSMTPTSSNYSPTSPSYSPSSPN
YSPNSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP
TSPSYSPTSPSYSPTSPSYSRTSPSYSPTSPSYSPSSPNYTPASPSFSPTSPSLYSSPRYSPASPSYSPGSPKYSPTSPS
YSPTSPSYASVSPQYTPTSPQYSPTSPTYSPTSPSYSPSSPSHTPGASTRYSPTSPKYSPTSLSYSPASPQYSPSSSKYS
PTSPTYTPTSPDYSASSPTYSPTGPPSYSPTSPTYSPTSPEYDDR
Swiss-ProtDNA-directed RNA polymerase II subunit RPB1
KEGG     K03006  RPB1, POLR2A; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]     
SUPERFAMILYSSF64484  beta and beta-prime subunits of DNA dependent RNA-polymerase superfamily     
Gene3DG3DSA:3.30.1490.180     
PfamPF05000  RNA_pol_Rpb1_4; RNA polymerase Rpb1, domain 4     
SMARTSM00663     
PRINTSPR01217     
CoilsCoil
ProSitePatternsPS00115  RNA_POL_II_REPEAT; Eukaryotic RNA polymerase II heptapeptide repeat.     
PANTHERPTHR19376:SF33
OrthologiGroup-00947    DNA-directed RNA polymerase II subunit RPB1      

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