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Gene detail [Fasta]

Species Pediculus humanus
GenePHUM130740
PositionDS235090:37045..41196[GBrowse]
VectorBasehttp://www.vectorbase.org/search/site/PHUM130740
Gene Expressionhttps://www.vectorbase.org/expression-browser/gene/PHUM130740
sequence mRNA: 
>PHUM130740-RA
ATGTCGACGAATCCTCAGTGGAGTAAATTCCAGCCGCCAATTATGAATTCGGATCCATCGATTCTCGATTTTAAAACATT
ATCAAATATAAATGACGATCAATCAAATTATCGGGGACTCAATAATTCGTTTCAGGCCTCGATGGGGAACAAGGACGCAT
CGAATTTACTATTTGGAAAACCCTCGTCGATGCCTTTTAATTTCAATACGTACAATGGAAGTTCAACAATGACATTCCCG
ATCGGGACATTTTCCCTGTCTGAACAACAACGATCGACCGGGAATTCATCCGTGTATGCCGTGAACGGGGATTTGTTCGG
TTCGAACAACGTGACGTCATCGAACATGTCTTCTTCTTCTTCTTCGTCTGTTGTTGTTGCTCCTGCTGCTGCTGCTAACA
ATTCACAATTCGATTCGGGTACGACGGGTACGAACTCAAACACAAATTCAAATTCTAACAATGACGTATCAGATTCAAAT
GCTGCCAATCAGGGAATAAGGGAGACTGGAATTATTGAAAAATTATTGCACTCTTATGGTTTTATTCAATGTTGCGAAAG
GCAAGCTCGTCTATTTTTTCATTTTAGTCAATTTAGCGGAAATATCGAACATCTTAAAATAGGGGATCCCGTCGAATTTG
AAATGTCTTACGATCGTAGAACTGGAAAACCCATTGCGAGCGCCGTTTCGAAAATAGCTCCAGAAGTGGTCATGAGTGAA
GAGAGAGTGACGGGAACCGTGACGACGGAAATAAAAACGGAAGGCACCGGTCAAGAGTTACAAGGTAGAATAAGTTACGA
AAATCGAGGTGAATGTTTTTTTTTGCCTTACAACAAAGATGACGTCGAGGGTCACGTGACGTTAAAATCTGGAGATAAAG
TTAGTTTTCAAATAGCAGCTAATCAAAGAGGAAATTTGGGAGCCTGTCACATACGTTTAGAAAATCCTGCTCATCCAATT
AAATATCAGGGAGTAGTTTGTTCGATGAAAGAAAGTTTTGGATTCATCGAAAGAGCGGATGTCGTCAAAGAAATTTTCTT
TCACTTTTCCGAGGCCAAAGTAGGAGCTGGAGATGAATTACGTTTAGGAGATGATGTACAATTTTTTATTCAAACGAGAA
ACGGAAAAGAAGTCGCTTGCAGTATTTCCCGCCTCGAACCCGGATCCGTTGTCTTTGAAGATGTTTGTACCGAAATAGTC
AAGGGTCAGGTATTGAAGCCGTTGGAAAGAGGGCCTCATGCCAGGTTGCAAGAAGATGCGTTGCCCGGTCGGATACGTTA
TCGAGCTCCCGATCATTCGGAAGTTGAAATACCATTCGGAGAAAAAGATCAATGCGGGGATTTTACTCTAAGGCACGGTG
ATTGGGTGCAATTTAGAATCGCTACGGATCGGAGGGACCAACTTCAGAGAGCCGTTAATATTTCGTTAATGGAAGAATCG
TTTTTGGTGTCGGGAGAGCGTCGGGAACAAGGGATAATTTGTTCTTTGAAAGACGGTTTCGGATTTATAAAATGCGCGGA
TCGCGACATGAAAGTTTTTTTTAACACAAACGAAATTTTAGACGTGGAAAAAGAAGCTCAGGTCGATGACGAAGTCGAAT
TTACCATAGTTCAAGACACTCTTTCGAGTTACAGTAATCCGAACAACAAACAATCAGCCATTAGAATAAAACTATTAGAT
TCAGGTACGGTGAAATTTGAAACTTTGGTAGAAGAAAATTTAACCGGTGTCATCGCCAAAGAAGCGAAAATGTGGAATTG
TAAAAGTCCAACCAAAACGTCCCCCGGTAGAGAAGATAGATCTCCCGAACCTGGAATAATTAATTACGAACAAGGTGATA
CAAAAAAATCAATTTCGTACTGTCACAATGACGGCGACGACACGAAAATGTCGCCACGTTTGGGAGATAAAGTCGAATTT
AACGTTGTTCAGGTCAAGAGAAACAAAAAGTTCCTAGCCGTAGACATCAAAGTAGTTTCGAGCAAAAATCAATTAAAAGT
CGTTAACGGAACGAATAATAATAATAATAATAATAATAATAATAGTAGTAATAGTAATAAAAAGGGTAAAGGTACGCCTT
GTCAAGGTTTCATAGCTGCTTTAAAAGATGGTTTCGGATTCATCGAAACCATAAGTCACGACCAAGAAGTTTTTTTTCAT
TTCAGTAATTTTGACGGTGATCCTGAAAAGTTGGAATTGTGTCAGGAAGTCATGTATAATTTAGGGAGTCGAAGCACTTC
GGGGAGTTGCATGTCGGCGGAAAATGTTAAATTACTACCCAAGGGAACGATTCCGGCTCCCGTTTGTTCAGGTCCGACTC
TCGACGGCGTCGTCGTACGTCCTCTGAGATGTTTCAATCCGGATCAATCACATTATGCAGGTTTGATACAGTGCGTGTCC
AACGTGCAACCTTCGTCAAATAGCGGAACTCAAACAACTCCTCCTCCTCCACCACCCACAAAATCCACATCCGGCGACGA
AGAAAAATTATCAGAGTACGAATTTGGAATTCTCGGATTGATGAACAAGCGGGAATTGCTTCAGTCGGGTGATCCGGTTC
AGTTTCAAGTTGATTCGGAAGGTCGTGCAGGAAACATTGTTGCCTTGCGTAAGAAAATAAAAACGACCGTGGATGCGGTC
AAAGGTCATTTCGGTTTCTTATCATACGCGGTCGAAGATGGGAAAAATCTTTTCTTTCGTATGACGGAAGTTAAAGATGG
AGCCATGTTGCAACCGGGAGACACGGTCGAATTTAATTTAGTGACCAATCACCGAAACGGAAAGACTTCAGCATGTAACG
TCACCAAAGTCAGTAAAAATCAGGCAAGACCGGAAAGATTGATAAGCCGGCTAAGAACAATATCTCTCGACGAAGGAGGT
CGTAAGTTGACGGTAGTGAGACAACCCAAAGGACCGGATGGCACAAAAGGTTTTAGCAGCACGGCAAGAAGTCCAAGATC
TCCAGGAACTCCGGTTACAGACTAA
PEP: 
>PHUM130740-PA
MSTNPQWSKFQPPIMNSDPSILDFKTLSNINDDQSNYRGLNNSFQASMGNKDASNLLFGKPSSMPFNFNTYNGSSTMTFP
IGTFSLSEQQRSTGNSSVYAVNGDLFGSNNVTSSNMSSSSSSSVVVAPAAAANNSQFDSGTTGTNSNTNSNSNNDVSDSN
AANQGIRETGIIEKLLHSYGFIQCCERQARLFFHFSQFSGNIEHLKIGDPVEFEMSYDRRTGKPIASAVSKIAPEVVMSE
ERVTGTVTTEIKTEGTGQELQGRISYENRGECFFLPYNKDDVEGHVTLKSGDKVSFQIAANQRGNLGACHIRLENPAHPI
KYQGVVCSMKESFGFIERADVVKEIFFHFSEAKVGAGDELRLGDDVQFFIQTRNGKEVACSISRLEPGSVVFEDVCTEIV
KGQVLKPLERGPHARLQEDALPGRIRYRAPDHSEVEIPFGEKDQCGDFTLRHGDWVQFRIATDRRDQLQRAVNISLMEES
FLVSGERREQGIICSLKDGFGFIKCADRDMKVFFNTNEILDVEKEAQVDDEVEFTIVQDTLSSYSNPNNKQSAIRIKLLD
SGTVKFETLVEENLTGVIAKEAKMWNCKSPTKTSPGREDRSPEPGIINYEQGDTKKSISYCHNDGDDTKMSPRLGDKVEF
NVVQVKRNKKFLAVDIKVVSSKNQLKVVNGTNNNNNNNNNNSSNSNKKGKGTPCQGFIAALKDGFGFIETISHDQEVFFH
FSNFDGDPEKLELCQEVMYNLGSRSTSGSCMSAENVKLLPKGTIPAPVCSGPTLDGVVVRPLRCFNPDQSHYAGLIQCVS
NVQPSSNSGTQTTPPPPPPTKSTSGDEEKLSEYEFGILGLMNKRELLQSGDPVQFQVDSEGRAGNIVALRKKIKTTVDAV
KGHFGFLSYAVEDGKNLFFRMTEVKDGAMLQPGDTVEFNLVTNHRNGKTSACNVTKVSKNQARPERLISRLRTISLDEGG
RKLTVVRQPKGPDGTKGFSSTARSPRSPGTPVTD
Swiss-ProtCold shock domain-containing protein E1
SUPERFAMILYSSF50249  Nucleic acid-binding proteins superfamily     
Gene3DG3DSA:2.40.50.140     
PfamPF00313  CSD; 'Cold-shock' DNA-binding domain     
SMARTSM00357     
ProSitePatternsPS00352  COLD_SHOCK; 'Cold-shock' domain signature.     
PANTHERPTHR12913:SF1
OrthologiGroup-00655    Cold shock domain-containing protein E1      

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