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Gene detail [Fasta]

Species Pogonomyrmex barbatus
GenePB18616
Positionscf7180000350255:359793..362983[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/pbar_10/?name=PB18616
sequence mRNA: 
>PB18616-RA
ATGGATACCGAGCACGTACTGAAGAACGACATCGGACAATGCTTGAAATTGATAGTGTCCGGGAACGACGCGACTGTCAG
CGACGGCTGGCTGATGCTGCAAAATCTTCAGGATCGCGAATTCAACCAGCTGACCGACTGCGAGGAGACGCTGAGGGATA
TTCTCCGAGGCGAGATAGCAAATATGTCAGAAGTGCCGAAGATTATGGCTTGGATGTCGGGTTACATCACGGAGAAACGT
TTCAACATCAATCCCATTTCCAACGACGTCGCCGTGCTACTGCGAAAAACGGATATCGACGACATGTCGCACCTGACTGA
ACTTCTGAGCACCCTGGCGGATCACAGGGTGTATCTGCCTAGATCGGCGAATCATACGAAACTCTGCGAGGCCATAGTCA
CAAGCCTGTCTTCCTTTCAGATGCCCTTGGAGCCGAAGAAAATAACTGAGTTTTATGACAACACCGCCAAGATTCAACAT
TTTCTAAAAGCCCTTTGTTCGAATACAAAAAATGGAGAGCGTGACATTCTCATGTTTACCTGTCTTCAAACTTTATATAA
CATCATATCCGATACAAATAGAAGACAGGAACCAGGTCCGGGACTCGCTGCCATATTGCAGCTGGTAGAAGCTTCCGTTA
TTCCACAGGCGGTAGACTGGATTCTATCCCAGTCTCATACCGACCATCAACTAATACAAGCCTTGAAAGTTTTATGCAAC
TGGCTCCCGAAATGGCTTGAAGATCGACTTAGCGTTTGGATAATGGAATTCATACGTGGTTTGGAAAAGCAACATAAATA
TTCCACCCTTCTTGAATTAACGGAATTTTCAATAGACATAGGAATGTTAATGTGTAGAGTGTTATTGATACCAGTGATCC
GCCAGAATGCTTCTAACATTATATTTTATATCTTGAAGAGGCAAAGTTCATTATCATTTGTTCAGAATGTAGTTAAGAAG
ATACCGGCATTAATAAAAGGCTTGATGAAGGAAAATTCAGATTCCAGTAAAGACTGCATACAGAATTTAGTTGATATCAT
GAAAGTATACAGCAAGAGATTTTCTACCTGTATGCCATGTGGAAATGCAGAAAATTATCCTTTTCCTGTACCACCACGCA
TGCAAGTTGTTAAAGAACTTTGCAGGGAGCCAGTATGGATAGATGAAACAAAAGAATTTGAACCAATTGTAGAACCAGAA
AGGCCATTATCTGGAAAAGTTGGACTATCCAATCTTGGAAATACTTGTTACATGAATAGTGTATTGCAAGCGTTATTAAT
GACCAGACAATTCTGTCAAGAAGTATTGAATTATCGTCCCTTAAATGAATCAAGTAAAACACCCTTGTTAGAAAAACTTC
AAAATTTATTTGCATTATTATTATATTCTAAGAGAATATGTTTGGCACCAACTGAAGTATTACGAGCATCAAGACCAACA
TATTTTTTACCTGGACAACAACAAGACAGTTCAGAATTTTTATGTCATCTTTTGGATGTTCTGCATGAACAAGAAAAATC
TGCCAATACAAACTGTGGAGGGAGTGATAATACGGCGACTCTTAAATGTAAAATTGAGAAACAGGAAGACTATGTAACGT
TGCCAATGGAATCAACAAAAAGTATTATTAAGCGTTGGACAACTGAAGAAGATCTAACAGAAGGTTTAGCTTTACAACGA
AAAACTCAATCATTAGCGGATTTTACACGAGGTGAGGAGCTTGGACAACGACTTAGTGATTCTCATTCGGATTCAACTGA
CAGCGGTATACAATCCGTAGGTGGTGAAGAAACAGGCACATACACATCTCTTATACACAGGGTACTAGGCGGAGAGTGTC
AAATCACCTACCAATGCGCACAATGTGACACTAGTTCCCGCAATACGGACAAATTTCGTGATCTACAGTTGTGCTTTCCC
GAAGAGATACAGGAAAACCAGGAAGTATCCGTTCAGGATCTTATCAATTATTATCTTACACCAGAGAAGCTTACGGGGGA
AAACAAATATCGATGCGACAAGTGCATGAAGTTGTGCGACGCGCAGAGGATCATTACAATTCTACAAGCACCCGCGCATT
TAATTCTGACACTGAAACACTTCCGATATGATTTCGATACTCGACTAAGGACCAAACTTCGGCACAAAGTAGTATATAAC
GATACCATACAATTACCGGTATCGACGATACCATATACCGTAGCCGAAACGTATCATTTGTACGCCGCTGTCGTGCATTC
CGGATATAGCATGGATTATGGGCACTATTTCACATATGCTTGCGATTCCAAGCAGAATTGGTACAAATTTAACGACAGTT
TCGTAACGCAAACTACATTCGAGGACTTTAAAAGCTTGAAACCTCCCGATACGCCCTACATATTGTTCTATGAAAAATCG
GGAGCTCATGACGGGATGTACGAAGATGACAAGCCTGAATTGTCGACTCTAAATAAACGTATACAAGAATTGATAGCAAA
TGATACTACAGATTATATAGAAGAGTTGAGACGTCGAGCGATAGCGTCGCAACGTAGTCAATTTCTGACAAAGCCTTTGA
GACAGCATAACAATTCCGACGATGATAATCCGCCACCCAGTAGCTGTCGTGGTGCAATCGACGTCCCGGCGAGTCGTTTT
CTTTATTAA
PEP: 
>PB18616-PA
MDTEHVLKNDIGQCLKLIVSGNDATVSDGWLMLQNLQDREFNQLTDCEETLRDILRGEIANMSEVPKIMAWMSGYITEKR
FNINPISNDVAVLLRKTDIDDMSHLTELLSTLADHRVYLPRSANHTKLCEAIVTSLSSFQMPLEPKKITEFYDNTAKIQH
FLKALCSNTKNGERDILMFTCLQTLYNIISDTNRRQEPGPGLAAILQLVEASVIPQAVDWILSQSHTDHQLIQALKVLCN
WLPKWLEDRLSVWIMEFIRGLEKQHKYSTLLELTEFSIDIGMLMCRVLLIPVIRQNASNIIFYILKRQSSLSFVQNVVKK
IPALIKGLMKENSDSSKDCIQNLVDIMKVYSKRFSTCMPCGNAENYPFPVPPRMQVVKELCREPVWIDETKEFEPIVEPE
RPLSGKVGLSNLGNTCYMNSVLQALLMTRQFCQEVLNYRPLNESSKTPLLEKLQNLFALLLYSKRICLAPTEVLRASRPT
YFLPGQQQDSSEFLCHLLDVLHEQEKSANTNCGGSDNTATLKCKIEKQEDYVTLPMESTKSIIKRWTTEEDLTEGLALQR
KTQSLADFTRGEELGQRLSDSHSDSTDSGIQSVGGEETGTYTSLIHRVLGGECQITYQCAQCDTSSRNTDKFRDLQLCFP
EEIQENQEVSVQDLINYYLTPEKLTGENKYRCDKCMKLCDAQRIITILQAPAHLILTLKHFRYDFDTRLRTKLRHKVVYN
DTIQLPVSTIPYTVAETYHLYAAVVHSGYSMDYGHYFTYACDSKQNWYKFNDSFVTQTTFEDFKSLKPPDTPYILFYEKS
GAHDGMYEDDKPELSTLNKRIQELIANDTTDYIEELRRRAIASQRSQFLTKPLRQHNNSDDDNPPPSSCRGAIDVPASRF
LY
Swiss-ProtUbiquitin carboxyl-terminal hydrolase 16
KEGG     K11854     
SUPERFAMILYSSF54001  Cysteine proteinases superfamily     
Gene3DG3DSA:2.20.210.10     
PfamPF00443  UCH; Ubiquitin carboxyl-terminal hydrolase     
ProSiteProfilesPS50235  USP_3; Ubiquitin specific protease (USP) domain profile.     
ProSitePatternsPS00972  USP_1; Ubiquitin specific protease (USP) domain signature 1.     

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