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Gene detail [Fasta]

Species Pogonomyrmex barbatus
GenePB16128
Positionscf7180000350190:310439..315518[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/pbar_10/?name=PB16128
sequence mRNA: 
>PB16128-RA
ATGGGTGATATAAAATCCTTCTTTCACCAGTGGTGTGCGAAAAACGGAAAGGAACCGCAATTCGATGTTAGACCGACAGG
ACCGAAACACAGGCAACGTTTCCTCTGCGAATTGCGTGTACCTGGCTTCGATTATGTTGGTGCGGGAAATTCTACCAACA
AGAAAGATGCCCAAGGAAACGCCGCGAAAGATTATGTCAACTATCTAGTACGTACAAATCGTGTGAATCCGAACGACGTG
CCGCAAGATTTGACGACACAGCCAGCGATTGCACCGGATAGCATCAAGACAGAAATCACAACACCGACAAGATCGGTATT
CCAAGGAGGCATGGGACCGAATGATATTGGTCAGGCCTATAGACCTTACAATGAACGTGGCCAAAGTAATTATACATACA
TGGATAGGCTGGCTGATCAAAAGAAAGTGGAAGATGCAGAAGACGTTGATGTAAATTCAGGGATACATGGGAACTGGACA
ATAGAAAACGCCAAGTCTAAACTCCATCAGTTCATGCAAACTAACAAAATTAATGCTGATTACAAATATACCTCGGTCGG
TCCGGATCATACGAGGAGTTTTATGGCAGAAATGACTCTTTATATTAAGCAACTTGGACGAAGCATAACTGGCCGCGAAA
CTGGATCGAACAAACAAACGGCTTCAAAAAGTTGTGCTTTATCTATCGTTCGCCAACTGTATCATTTAGGTGTTATTGAA
GCATTTAGTGAATTGGAAAATCAGATTCTCGATGTTTTAACGAGTTTGGAAATAAAACCAGTTGATATTAATCAGTTGCC
CTCTGTACCAAAAGGAGAAAATGACACTTCAACTACTGGTGTATCTTTATTGACGAATCAAGTTTTGGATGATTTTATAT
CTTCAGTGCCGCAACCCGCCGGTGTTGTAAGCTGGTCACCACCTCAACCAAATTGGAATCCATGGGCAGGATGCAAGCAT
GAAGGAAAGATCAACTTTGCCTGTTTTCACCAAAAAAATGAGATTATGAACGCGGTTAATGAAAATCCAATCATTATTAT
ACGTGGAAACACGGGATGCGGTAAGACTACACAAGTTTGTCAGTTTATTCTGGATGATTATATCGCGTCCGGCCAAGGTG
CGTATTGCAGCATAGTTGTGACTCAACCCAGAAGAATCTCAGCTGTATCTGTAGCTGACCGAGTCGCCATCGAAAGATGT
GAAACTCTAGGCCAATCAATCGGATATTCTGTGAGATTTGAATCCTGCTTACCAAGACCATATGCTAGTATAATGTTTTG
TACTGTGGGAGTACTCTTGAGGAAACTAGAGGGCGGTCTCAGAGGTGTGTCACACGTTATCGTCGATGAGATTCACGAGC
GAGACGTCAATTCGGATTTTATTATGGTGGTACTTCGAGACATGATCCATCTCTATCCTGATCTTAGAATTATTCTCATG
TCAGCTACAATTGATACAACGCTGTTCAGCGAGTACTTCAATAATTGCCCTGTAGTAGAAATTCCCGGCAGATCCTTTCC
CGTTCAGCAATATTTCTTAGAGGACTGTATAGAACTGACGAATTTTGTTCCACCCACAATATCTGGGAAACGTAAATCTA
AGGATTCAGATGAGTTGCCCATAACAGACGGCGAACCAGAAGAAAATCTGAATAAAGTCATCAGTAATAATTATTCTGTG
CAAACAAAGAACTCTATGGCACAATTGACAGAGAAAGAGATAAGTTTTGAGTTGATAGAGGCGCTACTCATGTATATTAA
ACAACAGGAGATCCCAGGTGCTGTATTGATTTTTCTCCCTGGCTGGAACTTGATATTTGCGTTGATGAAACATCTTCAGC
AACATTCTGTTTTTGGCAAATCGTCTTATCTTATTATTCCACTACATTCGCAATTACCAAGGGAAGATCAACGCAAAGTC
TTTGATCCCGTTCCACCTTATGTAACGAAGATTATCTTGTCTACGAATATCGCAGAAACTTCAATCACGATCAACGATGT
CGTCTACGTTATAGATTCTTGCAAGGCCAAGATGAAATTATTTACCTCGCATAATAATATGACCAATTACGCAACTGTTT
GGGCTAGTAAAACGAATTTGGAACAACGCAAGGGTAGAGCGGGTCGCGTTCGTCCCGGTTTTTGTTTTCATCTATGTTCA
AAAGCCCGATTTAACAAGATGGAAGAACATATGACACCGGAAATGTTTAGAACACCTTTACATGAATTGGCACTGAGCAT
CAAATTGTTAAGATTAGGTAATATTGGACAGTTCTTATCAAAGGCAATCGAACCACCTCCCATCGATGCTGTAATTGAAG
CAGAAGTTGTATTAAGAGAAATGAAATGTTTGGACAAAAACGATGAATTGACGCCTCTTGGCAAGATCCTTGCGCGTTTA
CCCATAGAACCACGGCTAGGAAAAATGATGATCCTGGGATGTATGTTTCGCGTGGGTGATGCGCTCTCGACAATGGCCGC
AAACAGTACCACCTTTCCCGAGGTGTATAACATGGGTCCAGACATGAGAAGACTGACGAATCAGCAAAAATGGTTTGCTG
GTGCGAGATACAGTGATCATGTTGCGATGTTCCACGCTTTTCAAATGTGGGAAGAAGCAAGAGCCAACGGCGAATGGGCG
GAACAGTCATTTTGTGAATCAAAAAGTCTAAGTTTGCCAACTTTACGAATAACCTCAGAAGCTAAGAATCAACTGCAAGC
ATTGCTGCAAAGTGCCGGTTTTCCTGAAGAGACTTTATGTCCAGTCCCATTGAATTATCAAGCTGGTGCTGATCCGCGTC
TTGATACTATCACCGCGTTATTATGCATGGGCCTGTATCCTAATGTTTGCTATCATAAGGAAAAACGAAAGGTTCTTACC
ACAGAATCAAAAGCTGCACTGATTCACAAGACGTCTGTGAACTGCAGCAACTTTGAGCAAAACTTTCCGTTTCCATTCTT
CGTCTTTGGTGAGAAGATTCGCACTAGAGCTGTATCTTGCAAGCAAATGACTATGGTGTCGCCTATACATTTATTGCTGT
TCGGCTCGCGGAAAGTGGAATATGTGGATAGTGTAATTCGATTGGATAACTGGATCAATTTGGATATGAATCCACAACAT
GCAGCGAATATAGTTGCTCTACGACCCGCTTTGGAGAGTCTCGTAATTCGAGCATCCAAAGATCCAGAAACAATCCTAGA
GTTGAGTTCAATCGAAGAAAAGGTATTGAGTGTAATCAAAGCGTTATGTAGTATGAATGCTTGTCGTCATGAACTGGAGC
AAGTATCCAATAGTGGTTTCCAATTGCGAACGAGAGGATATGCATCCAACTATCGTTTCAATTATACTCCTCCTCCAAAA
ATGATGCGTGGAAATGGTTATCGCGGTCCCTCTAACGAATCTTATGGAGGTAGTAGTTTTAGTGGTAATTACGGCGGTGG
ATACAGAGGAAATTACAACAACAGAGATTATGGAACGGGCAACTCGCGTGGTCGAAATGGAAATTGGAATAACGGTGGCG
GATTCCGTGGACGTTATTAA
PEP: 
>PB16128-PA
MGDIKSFFHQWCAKNGKEPQFDVRPTGPKHRQRFLCELRVPGFDYVGAGNSTNKKDAQGNAAKDYVNYLVRTNRVNPNDV
PQDLTTQPAIAPDSIKTEITTPTRSVFQGGMGPNDIGQAYRPYNERGQSNYTYMDRLADQKKVEDAEDVDVNSGIHGNWT
IENAKSKLHQFMQTNKINADYKYTSVGPDHTRSFMAEMTLYIKQLGRSITGRETGSNKQTASKSCALSIVRQLYHLGVIE
AFSELENQILDVLTSLEIKPVDINQLPSVPKGENDTSTTGVSLLTNQVLDDFISSVPQPAGVVSWSPPQPNWNPWAGCKH
EGKINFACFHQKNEIMNAVNENPIIIIRGNTGCGKTTQVCQFILDDYIASGQGAYCSIVVTQPRRISAVSVADRVAIERC
ETLGQSIGYSVRFESCLPRPYASIMFCTVGVLLRKLEGGLRGVSHVIVDEIHERDVNSDFIMVVLRDMIHLYPDLRIILM
SATIDTTLFSEYFNNCPVVEIPGRSFPVQQYFLEDCIELTNFVPPTISGKRKSKDSDELPITDGEPEENLNKVISNNYSV
QTKNSMAQLTEKEISFELIEALLMYIKQQEIPGAVLIFLPGWNLIFALMKHLQQHSVFGKSSYLIIPLHSQLPREDQRKV
FDPVPPYVTKIILSTNIAETSITINDVVYVIDSCKAKMKLFTSHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCS
KARFNKMEEHMTPEMFRTPLHELALSIKLLRLGNIGQFLSKAIEPPPIDAVIEAEVVLREMKCLDKNDELTPLGKILARL
PIEPRLGKMMILGCMFRVGDALSTMAANSTTFPEVYNMGPDMRRLTNQQKWFAGARYSDHVAMFHAFQMWEEARANGEWA
EQSFCESKSLSLPTLRITSEAKNQLQALLQSAGFPEETLCPVPLNYQAGADPRLDTITALLCMGLYPNVCYHKEKRKVLT
TESKAALIHKTSVNCSNFEQNFPFPFFVFGEKIRTRAVSCKQMTMVSPIHLLLFGSRKVEYVDSVIRLDNWINLDMNPQH
AANIVALRPALESLVIRASKDPETILELSSIEEKVLSVIKALCSMNACRHELEQVSNSGFQLRTRGYASNYRFNYTPPPK
MMRGNGYRGPSNESYGGSSFSGNYGGGYRGNYNNRDYGTGNSRGRNGNWNNGGGFRGRY
Swiss-ProtDouble-stranded RNA-binding protein Staufen homolog 1
KEGG     K13184     
SUPERFAMILYSSF52540  P-loop containing nucleoside triphosphate hydrolases superfamily     
Gene3DG3DSA:3.30.160.20     
PfamPF00270  DEAD; DEAD/DEAH box helicase     
SMARTSM00847     
ProSiteProfilesPS51192  HELICASE_ATP_BIND_1; Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.     
ProSitePatternsPS00690  DEAH_ATP_HELICASE; DEAH-box subfamily ATP-dependent helicases signature.     

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