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Gene detail [Fasta]

Species Pogonomyrmex barbatus
GenePB18843
Positionscf7180000350266:385512..390232[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/pbar_10/?name=PB18843
sequence mRNA: 
>PB18843-RA
ATGAATCTACGGCGATTGAAGATGCCGGTTAACCTCTAATCGTTCTACTGCGCACAAAGTGAAAAAAAGCTACAGATTCG
ATTTGCACGTTACATCGTAAAATATAATATAGCAGGATGAATGAAGTCAAGTTGCCACCATCACCAAACTGGTACTTGAA
TAATATTCTTGCATGTTCAAAACGTGGAACTGTAGCCTGGGGCACGAAGAATTGCATTGTCATTGCCAGACAGAAAGAAG
GCAATAATGCTATGCAATATTCCATAATCAAAGACCAATTTAGAGACAAAGTAACTGCAGTTGCATTTTGTCCTAAGTTC
GAAAGCCTGGATAGTCCAGAATTACTAATCTTTTGTGGTGATGATGTCAAAGTTAAAGTTTGGAATGTGGATACATTAGA
ACCAGTAGATGAATTCTCTTTTGCTGATGGAGTCAAATTGGTTGTAGGAGTTGACTGGTCAGTGAAAGATAGTAATATTG
CATGTGCAGTAAGTTCGGAGGGTATTCTAATGTACTGTAATATACAGTATAATACTTCAAAATTAGTGCCTCTAGGCAAG
CTAACTGCTACATGCTTAGCTTGTTGTCCTCATGATTCTAATCTTGTAGCAATAGGTACTAAAACTGGACTAATTTTTAT
CGTCCAAAAAGAAGTAATATTATATAAAATGAGGGGACATAATGAGGAAATAGTTAGTTTATCTTGGTGTCCTTCAGATA
TGAATGTATTAGCTAAAGAAAACACAAGAGACCTACTTTTAGCTTCTGGTGCAAAAGATAGATCTATATTCATTTGGAGA
GCTGGTAGAGATGGCAGATATGAAATTCAATTAAATTTACCACATTTGCCACTCACAGGCTCTTATCAAAATAAAAGCAA
GCTTAGTGCTGCAACTGGAGCCTGGATCGCAGTATGTTGGGCAGAACCCAAAGTGCTTTTAACTAGCTCTCTTTGGGGTG
AACTTCTTTCTTGGGATCTTTCAACAAACAAAGAAAAGCCTTTGTACAAACTGTTACATACATTTCATAATAGAGGATTG
TTTTGTATAGCTTCAGTACCTAACAATGATGAAGATGAAGATGATCTGACAAAAGAATCAGAAAATTGGAGGACAGATTC
CGAGCTTAGAGTTTGGACTTTAGCACAAGATCGCTGGATCATATGTTGCAAACGAGACAGCGATCCTACCAAATCAGTGA
TACTGGAACATAAAATTCCTACACAAGGAGGATTTGTCTACTGTATGAGCGCTTGTCCTATCGATACTTCGCGTATCGCA
TTTGGTGCAGGAGACACAATGTTGCGTCTCTGGAATTTATCGGAACCTCACACAACGACTTTTGATATTATTACTCATTG
GCAGAAAATAAAAGGAAAAATAAGAGCGATATCATGGTTTCCGTATGATGAAACTACAATTGCTTTTGGTACTGGAGAAG
GTCGTGTTGGTGTATTTGAAGCAATTGGAACCAACAAACCACCTATATTATATAGACAATATCACAGACATACCATTTAC
AAGATTGAATGGGCTAAATTTGAATCAGAAAATTATTTGTTCTCCTGTGCAGAAGGAGAATTAATAGCATACAAGAAATC
TGCACCGAATGATGAACCCATGTCTATAATAAAAAAAGGATGTATGGAATTTTCTTGGAAATCCAATTTATGCTTAGCAG
TTGCATTCGAAAATGGATCGCTTGCATTTTTCGATCAAAAGTTAAGAAAACGCGGCAACTCAATACACATTTTAAGAACT
ACGGTGAACTGTCTAGTGTGGCATCCCGAAAGTACAACGGCAGAAAGATGGACGTCGCCATATGCCAATTACTTGGCAGT
TGCCTCTGATTCGTGCGATATAATAATTTTTGATCTATCAAAGTTAATAATAGAATTGGAGAAAACAGGTACAAAAGATC
TTATAGAAAATGAAGATAAAGAACAAGAAAAAGATCGCACGAGCCACAAAATAGTAGCAACATTAACTGGACATTCCGAT
AGAGTAGTGTGCTTAGCTTGGAATCCGCATTTCAGTGGACTCTTGGTATCTGGTAGTTACGACAATACTGCACAGATATG
GAATGTTGAAAAACAAGAATTAATAGCCACATACATGGGTCATGATGGACCTGTATTATGTTGTATGTGGAGTCCTATCA
AACCGCAATTTATAATGACGGGATCAATGGACTTTATGCTTCACATATGGGATTATACATCGTCTGAGCAATCACCAAAG
CAACCTTCCGAAGTTAAAGTCATAAAGAAAAAACATAAACAGAAAAGATTGCTGAAAAATAAAACAGATGATTGTGAAAA
CGATTTGACTACATTGACAGATTCCACTAATCAGTCTGCTGACATACCTATCTCAAAGTTAACTCAAGACAATGCAGAGA
CTAATATTGAGATAGATATGTGGTGTAACAATTTGGAGGAGAACTTGATCTCCGCGGTCAAAAATCATCAATTAAATGAT
TTTTTAATATCGCTTGCACCTCACGTTTCTATCAAAACATGGAGGGAAATGTGCGAGGCTTACGCGCACCAGTTAGTGGA
ACAAAATAATCCAGGAAAAGCAGTGGCATATTTACTAAGTATACACAAAATTTATGATGCTATAGAAGTATTTTTAAATG
CCAAGTTGTTTAAGGAAGCTTACGCAGTTGCACGATGTAAATTGGATACTGATGACCCATTCCTAAAAAAGATATTAGAA
CAATGGGCAGAGTGGACTGTTTCGAAAGGTCACTTGGAGCAAGCAGCTCATTGGTG
PEP: 
>PB18843-PA
MNEVKLPPSPNWYLNNILACSKRGTVAWGTKNCIVIARQKEGNNAMQYSIIKDQFRDKVTAVAFCPKFESLDSPELLIFC
GDDVKVKVWNVDTLEPVDEFSFADGVKLVVGVDWSVKDSNIACAVSSEGILMYCNIQYNTSKLVPLGKLTATCLACCPHD
SNLVAIGTKTGLIFIVQKEVILYKMRGHNEEIVSLSWCPSDMNVLAKENTRDLLLASGAKDRSIFIWRAGRDGRYEIQLN
LPHLPLTGSYQNKSKLSAATGAWIAVCWAEPKVLLTSSLWGELLSWDLSTNKEKPLYKLLHTFHNRGLFCIASVPNNDED
EDDLTKESENWRTDSELRVWTLAQDRWIICCKRDSDPTKSVILEHKIPTQGGFVYCMSACPIDTSRIAFGAGDTMLRLWN
LSEPHTTTFDIITHWQKIKGKIRAISWFPYDETTIAFGTGEGRVGVFEAIGTNKPPILYRQYHRHTIYKIEWAKFESENY
LFSCAEGELIAYKKSAPNDEPMSIIKKGCMEFSWKSNLCLAVAFENGSLAFFDQKLRKRGNSIHILRTTVNCLVWHPEST
TAERWTSPYANYLAVASDSCDIIIFDLSKLIIELEKTGTKDLIENEDKEQEKDRTSHKIVATLTGHSDRVVCLAWNPHFS
GLLVSGSYDNTAQIWNVEKQELIATYMGHDGPVLCCMWSPIKPQFIMTGSMDFMLHIWDYTSSEQSPKQPSEVKVIKKKH
KQKRLLKNKTDDCENDLTTLTDSTNQSADIPISKLTQDNAETNIEIDMWCNNLEENLISAVKNHQLNDFLISLAPHVSIK
TWREMCEAYAHQLVEQNNPGKAVAYLLSIHKIYDAIEVFLNAKLFKEAYAVARCKLDTDDPFLKKILEQWAEWTVSKGHL
EQAAHW
Swiss-ProtWD repeat-containing protein 48 homolog
KEGG     K13133  GEMIN5; gem associated protein 5     
SUPERFAMILYSSF50978  WD40 repeat-like superfamily     
Gene3DG3DSA:2.130.10.10     
PfamPF00400  WD40; WD domain, G-beta repeat     
SMARTSM00320     
ProSiteProfilesPS50294  WD_REPEATS_REGION; Trp-Asp (WD) repeats circular profile.     
ProSitePatternsPS00678  WD_REPEATS_1; Trp-Asp (WD) repeats signature.     

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