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Gene detail [Fasta]

Species Pogonomyrmex barbatus
GenePB16762
Positionscf7180000350207:837653..854407[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/pbar_10/?name=PB16762
sequence mRNA:
>PB16762-RA
GTTAATAGCGGTTCTCCGGCAGAAGCTGCCGGTCTTAAAGCTGGCGATGCGGTTATCAAAGTCAACACCACCGACATGTA
TAATTTGAGGCACAAAGACGCGCAAGATGTCATAGTCAAGGCTGGAAATAATTTCGAAATAACTGTCCAAAGAGGCGGTA
GTACCTGGAAACCGCATGTGACGCCCGCAACCGCAAGCCTGCCATCTCCGATGCACACCGCATCCGCGGCTAACATCGCG
CCGGTCACAAAGACCTCTTTGGCAGCGAAAAAACAGGATGGACCCCTCATCGGCAGCGGACACAACTTCAGTCCCAAGCC
ATTCCTGAACGGCACCGGCGACGGTCCAATTAAGTCTATCGTGAACAAACAGTACAACAGCCCCGTGGGGATCTACAGTG
AGGAAACCATTGCGGAGACACTGTCCGCTCAAGCGGAGGTCCTTGCCGGTGGTGTCCTTGGAGTGAATTTCAAAAAGAAC
GAAAAGAACTACAATGCTGAGAACAGCGAGGTTTTCAAAATGGTACAAGAAGCGGACAAGGAACCAAAGACGCCAGAACC
TGCGGAGCCAAGTGCCGTGAGCGGCGTGATAACGCCGTCCTCGCCCGCCCTGGCAGGATTGAGGCCCGTCCAGGCGCCGG
AAACGAAGCCACAATCTCCATCGACGCCGCAAACAAGCCTACCACCAGGACAGAACATTTGCGCCGAGTGCGAAAGGCTC
ATCGTAGGTGTCTTCGTCAGAATCAAGGAGAAAAACCTTCATGTGGAATGTTTCAAGTGCTCGACCTGTGGCACGTCCCT
GAAGAATGTCGGTTATTACAATATCAACAATAAATTATACTGCGATATTCACGCGAAACTCGTCGCCAGGCAAAATGCTC
CGGCCGGTCTTACGCCCATCACTATACCACCAGGTGGCAAAGCACCAGCTAGCACCATCAGTGCGGCATTGGCGAATGCA
CCTTTATCGCCACCCCTCAGCAATCATGGATCGTCGCCTCAGCCATTCTCCATACCAACGAGCAATAATCTCATTGGTCC
TAAACCCTTTGGTGGATCGAGTGGCTTTTCATCAAATTTGTCTTCGGCTCCGACATTAAATTCCGGAAGCAGTACCTTGC
CACGTCCTCAAAGCCAAACTGTGACAGAAACTTCCAACAGCGAGACTTATGAAAGATCCTGTTATTACGAGACCGTGGAA
AGTACGAGAGATCAATCCTCCCGTTCTAATTCCGTAAAAGCACGTCGGAGTCTCGTTTGGCCACCTCCAAAACCTATCGA
GGATATCACATATCCCACTGCCAGTCCTTTATATATTAATCCAAATCCCGTTGATAAAAGGTGTTACCAGATTAAAGAGA
AGCGTGCCAGCATTGAGGCTTGCGAGCGTGCTTTGAGTCGTAGAACCGAGAGATATCGAAGTGAAAGCATAGATCGGGAA
GTAGAAAAAGTGTTGACAAATAGCGGTCTTCGACACGAAATTGACGCGATGGACCGGGTGAGTTGTCCTGGACAACCGGT
ATATCGACGTGTCGAGCTGGTGGACACCAGCAGTAGAACTTCCCGATCAGATATGACAACTTCGAGACCAAGTTCGACCG
ACAGTGTTCGAAGATCATTGACGCCTACCAGAATCGTTCAACCGATTCCAAAACCATGGACCGCGACTGTCAGCGGCGGA
GGCACGAATCTCTACGAACAGAGTTATGCGACACAGCAGCAACAGCCTGCAGGACAGATTTACAAGAAATTCATGCAGCG
GGAAGTTTGTCATCGAGAACGTACAGGCGGCAGGGAACATCGAGAGGAACGAGCTTACAGAGCGGAGATCTGTCGAAAGG
AGCAAACAATCTGCCCGAAACCGCCCTTACCTATACCTAAACAGGAACAACCCGCAGAGGTGGTCAAAGAAATCGACACT
GAAGTTACCAATCTGAGAAGTGACGAGACGGATGAAGCGGAAATTTCGAAAGGTATTCAAGGTGAACATGATCTCATCAC
CGAGACAACTGAAGAGACGATGGATGGTATGCACACGAAGCAATCAGCGACTTTCGAAAAGACTGTGGAACGAGTGTCAT
CACCGATGGAGAGATCTAGCACGCCGAAGATAGAGGAGGAGGAAGACAAAATAGAATCTGAATGTTTTGTAAGAAGAACC
GAGAAACATATCAACCGAGAAGTGGAGGACACGATGGAACGAACTGTGGAGAAGTCAGCCGAGACGGTTACGTCGGCCAT
CGACGCCCAGCAAATGTTGGAAAAGGCAAAACAAGAGGAAGAGGAAAGAAAGAAAGAAGAAGAAGAGGAAGAACGAAGAA
AGGAAGAAGAAGAGAGGAAGAAGCGTGAGGAAGAAGAACGTAAACATCAACAAGAAGAAGAAGAACGGAGGAAACGAGAA
GAGGAGGAGAAAGCGAAGAAACATGTGACTTTCAATGAAGAAGATGAAGAAGTCGAAGAAATACGAGAGCAACCATTAGG
AAGAACTGTTGTGCGAGAAGAACGTATCACGGAATCGGAAGGATCCACTCCTGGACGTTCCAAAATCACAAAAGAAACAT
ACGAAGAAATTACCGAAGAAGTGTTAGTCCATGAACGCGTAAAAAGAAAAGCGGCTATAGAAGACGAACGTAGAAAGAGC
TTGCGTGAGCAAGTAGAAGTTCACCAAAGTCTTCGGGACCAACAGGCGCCAGAGAAACGAAATGTTGTCGCGAGATATGG
ACAGCAGTCTCAGGAAACCATGGAGACATGTAAGAAGAAGGTACAGTTCTTGAAAGAAACGGAGACCGGCCCAAAACCTT
TATCGGACACACCTGTAAAAAATTCTACGCCCAAGGAGTGGAAGTCTGAAATGGTGAATGCCTTGACGACTGTATCCGAT
CGACCATACACGCCGTTGAACGCTACCTCCAGTGTAAAAGAACTTTATACCGAAGAGACCATTTATCTGGACCATAGATG
TCGGCCCAAGCCACCGCCGCCCAAAGAAGAAATCCGACCAATCTCACCTTTTCAGCAAGCATTAACGATAGCACCCGAAC
GACCTTACACTCCTTTAAGTCGTGAAATTGGGCCAGAGGATCAACAGATTGTCAGATCAGAGACTCCGAATCTTCAAGTT
CAAAACGGCGATTATTGTCCGCCGTTAAATATTTTATATGGCAAAGAAAGTACAATGAAAGAATCTTACGCGCGAGAGCA
AATGTATGTTAAGAAGGAAATCAAAGAATCGAGACCACGACCTTTGCCCACTCCGCCGCCTGATCATCGTCTGAGAGATT
CTTCCGCGTCACCTGCCGCAAAATCTCGAGCAAAAATATTCAAATCGTCCAAATCTTTCACGGCAGGTTTGAAAAAGCCG
GACGCTATACCTGCCTATCAAAGAAACTTGGTGGCAATGAAGAAGGGACCTGTAGAAGGTCAGCCGTTTGTTCCTAGCAG
AACACCTACTCCAACGCCTGGCAGATCAAAGTCACCTGCTCAAGGCCCGCCTGAACCACCGGCTTGTTACGTAAAGGCTC
AAGCTCCAAGAGTTCGAGAGAATCCACCACCATCCAAACGCGGATCGGTGCATTTTCCTTCACGCAAGACAATCTCCTAC
CACGTGGAGGAAGATACCGATAGCGGTCACAGAAAACAAGAATACTCTGCTTCGAGGATTGTCAATTATGATGAGAAAGA
AACTAGTCTCGATGTGGATCCGACGGACGCACTTTATGCCCAATTTCAAGAAACACGGAGTATGACAAGTGAGGAGACCA
GCGAGCAGCAGAATACGGCGACTCACGTGAAAAAAGCGCTTCAAGTATTCGAAGACTATGAGAAATGTGAGCGGAAAGAG
ATACCACCGCCAACACCACCACAAAGTCCGAAACCAAGTATCTGTGCTATTAATAAAGCAAGCAACACGAAGCCTACTTT
ATCATGTCCTATGACATCATCTGTGCCGGCCAGACAGCCAACTTACTGCAGTTCTACCGAAGTGCGTCACGTGCGATATG
AGACTCCTTCACCGCGACCTTGTCCGGAAACAGGGGTAACCGTTCTACCCTGCAAAGCGCATTCCGATCAGGGTGTCAAG
GCTGGCGTTGTCGTGGTGCCCTGCGATGGCCAGATTACGTGTCCTAAATCTGGAATCTGCGTAACAGCCACAAAAGATCG
ATCGGGTGTGTGCGTGTCACCTTCATTCGGGATGCGACCCGGCACCTGCGGTCAACCGTCAGGCACCTGCGGTCGCGAAT
TCGGCTGCGGCTTCAATATCTCGAACTGTCAAGATTCTGACATTTGTGTGGCCCCGTGCGTCGACGGTTCCGTCTGTGTG
GCACCTTGCAAAAAATCCGGTCCAAATCAGTCTAAAGCAAATCTTCCCTTTCCTCAAATCCCACTTCCTTACGACGAAAT
TCCCCCGCCAACTCCTCAACCTCCTAAGCCTCGCACTAATCTGAGCGGCCAGCTTGCGCGATTGACCGCCAAAAACGGCC
AATCAAATGTGCCTGTAATACAACTTTACAAGCCGATCCAAGTTCAGACCCAAGTTCAGACTCCTCAGACCCAGAGTTAC
ACCGAGAACACTTATTATCACACCCAGAGCTATCGCGAAACCCACTGCGATTCCGGCAATCATTGCCAAAGCATTCAGAA
TCACTGTCAGGACCAGATCCATTGTGATCCCCCTAGTAAGATCCAGAGTTTAGTAGACCCAAATTTGTCGTCCTACCCGG
ATTTAGGTAGCGGAATCGGTGGCCTCAGCAGCGCTGGTTCTAAGAGCGGATCGTTCGCTGGTAGCAGCGCACCTAAACGT
GGACGGGGTATCCTGAATCAAGCTGTCGGAGCAGGATCACGTATTCCTATGTGTGCTCATTGCAACTCATACGTCAGAGG
GCCTTTCATCACTGCTTTGGGTCAAATCTGGTGCCCCGATCACTTCGTCTGTGTTAATGCCCAATGTCGTCGTCCTCTTC
AAGATATCGGCTTTGTCGAGGAAAAAGGACAACTCTATTGCGAATACTGTTTCGAAAGATTCATTGCGCCTACGTGCAAC
AAATGCAACAGCAAAATCAAAGGGGATTGCTTAAATGCGATTGGAAAACACTTCCACCCTGAATGTTTCAACTGCGCTTA
TTGCGGCAAGCTCTTCGGTAACAGTCCGTTTTTCCTGGAGGAAGGATTGCCTTACTGCGAAGCTGACTGGAACGAGCTGT
TCACCACGAAATGCTTCGCATGTGGATTCCCAGTCGAGGCTGGTGATCGTTGGGTAGAGGCCCTAAACAACAACTATCAC
AGCCAGTGCTTCAATTGCACGATGTGTAAGAAGAATCTTGAAGGTCAAAGCTTCTATGCGAAAGGCGGTCGTCCTTTCTG
CAAAAATCATGCACGTTAAATTATCTGTTCTCGACCATCGCGTAATCGATGAGACGACAGGAAGGGAAAATAGGAAGAGT
GAAGAAATGGAGAGAAAAATCCAACTAAGAGAGAAGCGTACAGCGTTAATGCACCAATTACTCTATCGCGATTACTTTTT
TTTTCTGTATCTTCGACGAAGAACATTTCACTAACTCTTTTGTCAAATCCGCAAGCGATCCTTTGTATAGCTATGAAAAT
ATGGATCAATTAGGGTGATTTTGACAAAGAAACATCTCTTTGAGTCTTTGATAATAAATTATAATATTATGAAAAGAGAG
AGAGTGATAGTTAGATATATTATAAAATGATATAAAAAAATAAAAATAAAATTTTGAAGAGTGATGACTCTTAATGATAT
TAAATAACATGATATTATATGTTTTTCCAGCGTCACCAATCACCCTGATTAATTCTATGCAATATTTTCACAAGGTGTTA
TCGTGCATGTCCGACTATAAGAAAAAGAGAAAATTATTAAATAATATTTATTATCTAGCTTATTTGAGAAAACTATCAGC
CGCCTCAAAAGAGTTCAACGGAGACACAAATTTTCATTTCCAATTTATAAAACTTAATAATTTATTAATCTTTTATCTAT
AAGTACTAAACATCAAAAGAAGTTACATTGATATA
PEP:
>PB16762-PA
MYNLRHKDAQDVIVKAGNNFEITVQRGGSTWKPHVTPATASLPSPMHTASAANIAPVTKTSLAAKKQDGPLIGSGHNFSP
KPFLNGTGDGPIKSIVNKQYNSPVGIYSEETIAETLSAQAEVLAGGVLGVNFKKNEKNYNAENSEVFKMVQEADKEPKTP
EPAEPSAVSGVITPSSPALAGLRPVQAPETKPQSPSTPQTSLPPGQNICAECERLIVGVFVRIKEKNLHVECFKCSTCGT
SLKNVGYYNINNKLYCDIHAKLVARQNAPAGLTPITIPPGGKAPASTISAALANAPLSPPLSNHGSSPQPFSIPTSNNLI
GPKPFGGSSGFSSNLSSAPTLNSGSSTLPRPQSQTVTETSNSETYERSCYYETVESTRDQSSRSNSVKARRSLVWPPPKP
IEDITYPTASPLYINPNPVDKRCYQIKEKRASIEACERALSRRTERYRSESIDREVEKVLTNSGLRHEIDAMDRVSCPGQ
PVYRRVELVDTSSRTSRSDMTTSRPSSTDSVRRSLTPTRIVQPIPKPWTATVSGGGTNLYEQSYATQQQQPAGQIYKKFM
QREVCHRERTGGREHREERAYRAEICRKEQTICPKPPLPIPKQEQPAEVVKEIDTEVTNLRSDETDEAEISKGIQGEHDL
ITETTEETMDGMHTKQSATFEKTVERVSSPMERSSTPKIEEEEDKIESECFVRRTEKHINREVEDTMERTVEKSAETVTS
AIDAQQMLEKAKQEEEERKKEEEEEERRKEEEERKKREEEERKHQQEEEERRKREEEEKAKKHVTFNEEDEEVEEIREQP
LGRTVVREERITESEGSTPGRSKITKETYEEITEEVLVHERVKRKAAIEDERRKSLREQVEVHQSLRDQQAPEKRNVVAR
YGQQSQETMETCKKKVQFLKETETGPKPLSDTPVKNSTPKEWKSEMVNALTTVSDRPYTPLNATSSVKELYTEETIYLDH
RCRPKPPPPKEEIRPISPFQQALTIAPERPYTPLSREIGPEDQQIVRSETPNLQVQNGDYCPPLNILYGKESTMKESYAR
EQMYVKKEIKESRPRPLPTPPPDHRLRDSSASPAAKSRAKIFKSSKSFTAGLKKPDAIPAYQRNLVAMKKGPVEGQPFVP
SRTPTPTPGRSKSPAQGPPEPPACYVKAQAPRVRENPPPSKRGSVHFPSRKTISYHVEEDTDSGHRKQEYSASRIVNYDE
KETSLDVDPTDALYAQFQETRSMTSEETSEQQNTATHVKKALQVFEDYEKCERKEIPPPTPPQSPKPSICAINKASNTKP
TLSCPMTSSVPARQPTYCSSTEVRHVRYETPSPRPCPETGVTVLPCKAHSDQGVKAGVVVVPCDGQITCPKSGICVTATK
DRSGVCVSPSFGMRPGTCGQPSGTCGREFGCGFNISNCQDSDICVAPCVDGSVCVAPCKKSGPNQSKANLPFPQIPLPYD
EIPPPTPQPPKPRTNLSGQLARLTAKNGQSNVPVIQLYKPIQVQTQVQTPQTQSYTENTYYHTQSYRETHCDSGNHCQSI
QNHCQDQIHCDPPSKIQSLVDPNLSSYPDLGSGIGGLSSAGSKSGSFAGSSAPKRGRGILNQAVGAGSRIPMCAHCNSYV
RGPFITALGQIWCPDHFVCVNAQCRRPLQDIGFVEEKGQLYCEYCFERFIAPTCNKCNSKIKGDCLNAIGKHFHPECFNC
AYCGKLFGNSPFFLEEGLPYCEADWNELFTTKCFACGFPVEAGDRWVEALNNNYHSQCFNCTMCKKNLEGQSFYAKGGRP
FCKNHAR
Swiss-ProtUbiquitin carboxyl-terminal hydrolase 8
SUPERFAMILYSSF57716  Glucocorticoid receptor-like (DNA-binding domain) superfamily     
Gene3DG3DSA:2.10.110.10     
PfamPF00412  LIM; LIM domain     
SMARTSM00735     
ProSiteProfilesPS50023  LIM_DOMAIN_2; LIM domain profile.     
CoilsCoil
ProSitePatternsPS00478  LIM_DOMAIN_1; LIM zinc-binding domain signature.     

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