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Gene detail [Fasta]

Species Pogonomyrmex barbatus
GenePB23832
Positionscf7180000350351:81905..94990[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/pbar_10/?name=PB23832
sequence mRNA:
>PB23832-RA
ATGTCTGTACACTACAAATTTAAATCTACTTTGGACTTTGATACCGTGTCGTTTGATGGACTGCATATTTCAGTGGCTGA
TTTGAAGAAGGCTATATTTCATCAGAAACATTATACGGATGATAATGCATTAATTGCAAAAAATACCAGTCTTATTGTTG
CCAGAGTTCCATTGACTGTCCAACAGAAACGTTCTTGGGATCGAACTGAAACTCCTCCATTCAGTAATGTAAAAGACGAA
GCTAATTTAGGCCGAGCTGTAGATCTCACAAGATTAGATGGCTCAGAAGAGGATAAAATTCGTGCAATGATGACACAATC
AACTCAAGATTATGATCCATCAAATTACATGAAAATTCGTGGAGCCAATCAAACTGGCGACGTACCTGCAAATTACCGTT
GTTATAAATGTCACCAGCCTGGACACTGGATAAAAAACTGTCCATTGGGAATAAATCAAGAACCAATTGAAATAAAGAAA
AGCACAGGTATTCCCAGAAGTTTTATGGTACCAGTTGAAGGACCTTTGGTACCTGGTGCCATGATGACACCTACAGGACA
CTATGCTGTTCCCGCTATCGATCATCAAGCTTACAAGGAAGGTAAAAAGGAACGACCACCATTTTCGCAAGATCCAGAAC
CTGTAGCAGAAAAGCCAGAGATACCAGAGGATTTATTATGCAACATCTGCAAAGATCTTTTGACAGATGCAGTAATGATC
CCATGTTGTGGAAATTCCTTTTGTGACGAATGTATTCGTACGTTTTTATTAGAATCTGAGGAACACGAATGCCCAGATTG
TAACGAGAAAGATGTGTCCCCGGAAACTCTTATACCAAATCGATTTTTACGTAATGCAGTAATGAATTTTAAAAATGAAA
CTGGTTATGCTAAAAGACAAACATATCGGCCTTCTGCTCAAAGTACTGGACAAACCACGGCGTCAACTGATCAACCAAAA
ATTGAAACGCAGCAAGCTGCGAGTCATGTATCTTCTCAGGCTAAAACTGTACAACCATCTGTGGTTTCTAATATTCCATC
GCAAGAACCTGTAGAACTGCAATCCACTAATGTCGAATCTACTTCGCAACACTTTCCAACCACTGTCTCTAGTTCGCAGC
CACAATCGTCAACCACTCTGCCTGAATCTACTTCAGAGTCACAGTTGCAAAGTGACTCGGTAACAAAACTAACAACTGAT
GAGGAAACTGAGGTGCCTCCTCCTCCAGGAACAGAGCCTTTACTCCCGATTCCTGCCATCGTGAGCTCACCAGAAAGAGA
ACGCGAGAGAAGTGATCCATCGAATCGCGATAAGAAGGAACGTGACAATGAATATTCGGGAGAACGTCAATCGAGGGAAC
GTCGACGAAGTTTCAGTAGGGATGGACATCGTGATAGAAGTGGAGAGCGTGGTCGCAGAATCGAGAATTTACGACCATTA
AACCGTAACCGAAATCGATCCCTTTCGCCCAGGCATTCCCAACACGGCGAATATCCAAGTTCAGTGCTACCTCATTTAAT
GAACCCACCTCCCTCCAAGGGATATCAAGGTCATTTAGCGGATGATGGACATTATCCGTCTGCTATGCATTATGACAGTG
GGATACGACGATCCAATGAAGATCGTGCAGGCACTCCAACGGTCGATGAACCACATTTACATGTCCCTTCATCTGGTAAT
CAACCACCGTTATTGCCGTTCCCACCAGGCGAAGAGCGCATACCGGCACCAAATTACAATCAGCCACCACCAAACGTACC
TCCGCATAATCCTCCACATAATCCATCACATAATGCTCCGCTTTTGCCAGATCCATATATGAGTCATCGAATACCGATAT
ATCCGCATCAGCAAGGACATTACGGCGGACCGCCGAGATATGACAGACCTCCTTATCAACAACAGGTATATCGACCATCT
CAACCACCTCGAAACTATAATGGGCCACCGAGACCAATGAGAGGATTACATCATATGGGATATAGAAATTCACAACCACC
TCCACCAGGCTTAGGTAGAAATGTACACAATGGTAATCCACCTGGAATCATCGATGATCCATTGGAAGCGTTCGAACGCA
TGCTCAGAGAAAAGGATGAAAGGGACCGGCGTTTGGGGAAGCATAGAAGAAGAAGCAGAACACGATCTCGTTCACGTAGC
TATAGTCGATCGAGATCACGTTCTTTTGGTCGTAGATCGCCTTTTACATCTCGTATCAGTCGATCTCGCAGTCCGCCATC
GAAACGAAGATCATCAAGATCACCGTTGCCTCTCAGACCTCGTAGTCGTACCCCAAAACGTAGATCCAGAAGCGGTAGCT
TCTCTATCAGCAGATCTAGGTCATATTCCCGCAGTCAGTCGCCAAGACTATCTCCATCGAGAGACAGAGAGAGAGACAGG
GAAAGAGATCGTGATCGTGAACGCGATCGCGACCGTGATCGTGATCGTGACAGAGATCGCGAGCGAGATCGCGACTTGTT
GCCCAGATATCGATCGCCAATCAGATCACCTCCAAGATTTCAAAGAGAGAGAGATCGTGAAAGAGACAGACCGCGATCAC
GCGAACCTCGAGATGGATATAATACTTACTATGGCGATTCGCCGGCTCATGATTATCAGTTTCGTGATCGTGAGCGCGAT
TTGCCGCCTAGAGAGAGACCATTGCCAAGATATCCTATAGGAAGAAATCAGCCGTCCCAACACAATATACCGCCGTTGAT
GTCGCATCTAGTCACTGGAAGTCACCCACCACCACCGCTTATGTCATTGGGACCTTCGCCTACGGACAGGAAAGACTATT
ATGATTCCTACAACAGGTATCCCGGACCTCCACCATCACAGCGTTTCGGCAGTCCCTTAAGGGATCTTTCATCACATAAG
CGATTTGATGATGTAGCTCCACCTGGTACTGAAGGTTATTACGATCTCTCACCACCGGGTGTCGAACATTCCGAAAGATC
ATCGAGAGACGATCGTGAAAGGCGTTCTCTAAGAGATCAAGAAGATCGGGAACACTCATCTAAGGATCGTGATAACGAAG
AACGCGATAGATTAAGGGATGATAGGGGTCGCGAACGTGAGGACCGTATGCGCGAGAGAGACGACAGAGATCGTAGAATC
GTAAACAGAGAGGATCGCGATAGGCAGATCCCGCCTAGAGAACACGAGGACAGAATACGAGAGAAGGATGAGCGCGACAG
AAGAGAAAAGGAGAAAGAACGGGATGATAGACACATTCGTGATCGTCGAGACGATGATAGGCATGTCGAGAAGAAAGATT
ATGATAAAGATCGTTACAGAGATGATCGAGATCGTCACAGACAAGACGACAAGAATCGATTACGAGAAAAAGACAGACGT
GAACGCGAATACGAGTTTGAGAAAGACAGAGATCGTCACGAGCGATACGAGAGGCGTTCGATGGAGCGAAAGAAGAATAG
AAAGAGCTTAAGTCCATACTCGCAGAAATCCAGAGGCGATCCTAAAGATTTGTCACCAGAACGAAGTACAAAGAAGAAAG
AAAAAGATCATGAGGAAAAGATAGAAGAAAAGAAGAAAGAGAAGAAAATAAAGGAAAAGAAGAAAAAGAAAGATAGTGAT
GACAAAGAGAAGAAGAAGAAGAAAAAGAAGGACAAAAAATCCAATCAGAAAGATGCAGCTAAAGACGATCCAACGATTAA
AACGATGGAGACAGACAATTTGTTGATCGAGAGTAAAACAAATAACGATACTTTATCTTCGCCGCTCAAAATTGATTCCA
TAAAGGCATGTAATGAGGAGGATAACATGCAAAATAGAATCGAATGCGTTTCCAATGAGGTAGCTATTGCACCGATTAAG
GAAGAATTCGAGGACAAGTCTCTGGCGATGAATCCAGAACCGCCGGAATTCAACGAATCCAGTCCCGGCAGTGGTCGCTT
AGATCGTACGGAATTTGGTACAAATCCGCCAAATCCAAACTTTAAACCGATTCCGGAACTCAAGTCAGACATGAAGCCGA
TCGATAGCCTCTATGGTGGATTAGATGATACAGAGATCAACACTGTAATCACGGAAAAGTATTCTTTACTTTCGGAACAC
TCACAAACCGAGACGAAAGAAGCCACTACCGTCTTATTAGCAACTGCGGAGAAATCGCCAAAGAAAGATGAGTTTCTGGC
GCCAATACCTGAATTGTCCAAATGGGAAAGAGACGATACAATTGAAAAACCCGATGACGATGACGACGATGCGAGCGGCT
CGCCGACAGAAAAAATACAGAGGGAGGACGAACCGAAATCTGTCAAGATGGTTACATCGGAAGTACTGAAACGTGCGGAG
AATGCGATATTCCAAAAGGCAATTAATGCGATTCGACCGATTGAGATCAAAAAGATCAGCGAAAGTAGGAAGATACTGTA
TCAGAATCCCGAGCCTAAAGTATTGGAGACGGTGGAGTCTGCTAATCGAGAACCACGAAAGAGCGTCAATGTGACGATTA
ATGTTGGTAGAAACGAGAGAAATGTCGAGATTACCGAACCAGCGAAAAAAGCCAAACTCGATCGTACCAAATTCAAACCT
GTTCCAGAAACAGCCTACTCGCCGACCAGACTGTCTGCCAAAGAGAGACTCGGCGAGAAGATTGAGGATAGCAAGGAGAG
AAAGATTAGTCCTATAAAGGGATTCCTAGAGAGACGCGACTCCAAGAACGAGAGTCAATCAAGGAGTCGATCGCCTAGGA
GGGAAAAGAGACTTTCCTCTCCGCTTTTAGAGCGACGCGTTGAATCCTCTTCGTTAAGTCTAACTACAACGAGTAGTGAA
AGAAAGGTCTTTTTGGAAGAGAGAAAACGAGATAACAAAGATAGAGGCGATCGATCAAAGGAGAGATCAGATTTCCGAGG
CGACAGGCATGGCAGTGAGTTGAAAGCAGAGAGAGAGAGTAGAATTGATTGTAGAACAGATTTTCGCTCGAGTAGGAATG
ACATCAAGGGAGAGCGCATGGATAAAGATCGTGATAAGGAACGAGATCGTGAGCATAGAGGCAGAACACCTCCTTCGGTT
TGTGCGTTTAAAAGAACAGAAATATCCAAGATTGGTTTATTGAAATCGAAAGACGACGAGGAAGAGAAAAGACGTGATAA
GAAGTCACGAGAGGAGAAGAAGAGAAAAAAGGAACACCGCAGCAGAAAAAAGAAGCAAAAGCACAAGGAGAGTACAGTCT
CAAGAGACAAATCGGATGGCAATGAGACCAAGGTTAGTTATGAGAACATCGAGCCGCCTCTGGTTGATTCGTTAAAGAAA
CAACGGAAAAATCCCAGACTGGTATCCGATCGTAAGCGTAGTATACTTGACGAAGCAAACTTCGAGCCTGATTACTCGGC
TTCAGACTCTGAATCGGATGGTGAGGAAGGTAAAGTTTTGCCACCCACGAAGAAATTGAAACTCGACGAAACAGAATTAG
ACAAGGAGATGGAAATGAAATCCCTAAAAAAACGATCCAAATCCAGTAGCAGCGAGGACACATCAAGCAGTTCTGATACG
ACAAGCTCCGACTCCGAAAGCAGTGATGAATCGCATAAGAAGAAAAGGAAAAAACATAAGAAACATAAGAAGAAGAAATC
TGTCAAAAAAGATAGCAGTTCGGACTCGGATACTTACTCTGATTCATCCGATAGCAGCAGTGACGAAGAGAAACATAAAA
AGAAATCGAAGAAATCAAAAAGCAAAAGCAAACAGTCAAAAAAGAAGAAAAAATCCAAGCATAAATGA
PEP:
>PB23832-PA
MSVHYKFKSTLDFDTVSFDGLHISVADLKKAIFHQKHYTDDNALIAKNTSLIVARVPLTVQQKRSWDRTETPPFSNVKDE
ANLGRAVDLTRLDGSEEDKIRAMMTQSTQDYDPSNYMKIRGANQTGDVPANYRCYKCHQPGHWIKNCPLGINQEPIEIKK
STGIPRSFMVPVEGPLVPGAMMTPTGHYAVPAIDHQAYKEGKKERPPFSQDPEPVAEKPEIPEDLLCNICKDLLTDAVMI
PCCGNSFCDECIRTFLLESEEHECPDCNEKDVSPETLIPNRFLRNAVMNFKNETGYAKRQTYRPSAQSTGQTTASTDQPK
IETQQAASHVSSQAKTVQPSVVSNIPSQEPVELQSTNVESTSQHFPTTVSSSQPQSSTTLPESTSESQLQSDSVTKLTTD
EETEVPPPPGTEPLLPIPAIVSSPERERERSDPSNRDKKERDNEYSGERQSRERRRSFSRDGHRDRSGERGRRIENLRPL
NRNRNRSLSPRHSQHGEYPSSVLPHLMNPPPSKGYQGHLADDGHYPSAMHYDSGIRRSNEDRAGTPTVDEPHLHVPSSGN
QPPLLPFPPGEERIPAPNYNQPPPNVPPHNPPHNPSHNAPLLPDPYMSHRIPIYPHQQGHYGGPPRYDRPPYQQQVYRPS
QPPRNYNGPPRPMRGLHHMGYRNSQPPPPGLGRNVHNGNPPGIIDDPLEAFERMLREKDERDRRLGKHRRRSRTRSRSRS
YSRSRSRSFGRRSPFTSRISRSRSPPSKRRSSRSPLPLRPRSRTPKRRSRSGSFSISRSRSYSRSQSPRLSPSRDRERDR
ERDRDRERDRDRDRDRDRDRERDRDLLPRYRSPIRSPPRFQRERDRERDRPRSREPRDGYNTYYGDSPAHDYQFRDRERD
LPPRERPLPRYPIGRNQPSQHNIPPLMSHLVTGSHPPPPLMSLGPSPTDRKDYYDSYNRYPGPPPSQRFGSPLRDLSSHK
RFDDVAPPGTEGYYDLSPPGVEHSERSSRDDRERRSLRDQEDREHSSKDRDNEERDRLRDDRGREREDRMRERDDRDRRI
VNREDRDRQIPPREHEDRIREKDERDRREKEKERDDRHIRDRRDDDRHVEKKDYDKDRYRDDRDRHRQDDKNRLREKDRR
EREYEFEKDRDRHERYERRSMERKKNRKSLSPYSQKSRGDPKDLSPERSTKKKEKDHEEKIEEKKKEKKIKEKKKKKDSD
DKEKKKKKKKDKKSNQKDAAKDDPTIKTMETDNLLIESKTNNDTLSSPLKIDSIKACNEEDNMQNRIECVSNEVAIAPIK
EEFEDKSLAMNPEPPEFNESSPGSGRLDRTEFGTNPPNPNFKPIPELKSDMKPIDSLYGGLDDTEINTVITEKYSLLSEH
SQTETKEATTVLLATAEKSPKKDEFLAPIPELSKWERDDTIEKPDDDDDDASGSPTEKIQREDEPKSVKMVTSEVLKRAE
NAIFQKAINAIRPIEIKKISESRKILYQNPEPKVLETVESANREPRKSVNVTINVGRNERNVEITEPAKKAKLDRTKFKP
VPETAYSPTRLSAKERLGEKIEDSKERKISPIKGFLERRDSKNESQSRSRSPRREKRLSSPLLERRVESSSLSLTTTSSE
RKVFLEERKRDNKDRGDRSKERSDFRGDRHGSELKAERESRIDCRTDFRSSRNDIKGERMDKDRDKERDREHRGRTPPSV
CAFKRTEISKIGLLKSKDDEEEKRRDKKSREEKKRKKEHRSRKKKQKHKESTVSRDKSDGNETKVSYENIEPPLVDSLKK
QRKNPRLVSDRKRSILDEANFEPDYSASDSESDGEEGKVLPPTKKLKLDETELDKEMEMKSLKKRSKSSSSEDTSSSSDT
TSSDSESSDESHKKKRKKHKKHKKKKSVKKDSSSDSDTYSDSSDSSSDEEKHKKKSKKSKSKSKQSKKKKKSKHK
Swiss-ProtTRAF3-interacting protein 1
KEGG     K10624     
SUPERFAMILYSSF57756  Retrovirus zinc finger-like domains superfamily     
Gene3DG3DSA:4.10.60.10     
PfamPF08783  DWNN; DWNN domain     
SMARTSM00184     
ProSiteProfilesPS50158  ZF_CCHC; Zinc finger CCHC-type profile.     
CoilsCoil

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