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Gene detail [Fasta]

Species Pogonomyrmex barbatus
GenePB21670
Positionscf7180000350319:845889..853865[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/pbar_10/?name=PB21670
sequence mRNA:
>PB21670-RA
ATGCGATCAATTGCCACACAGTCGAGCAGCCAGTCACGAGACCGCCGAAAGTGTGTCAGTACGATCAGGCTACCTGCAGC
AACGGCGACTGTATTCCCAAATCGTACATCTGCGACGGTAAATTCGACTGCACCGATGGATCCGACGAGATGCGGTGCAG
TAAGTAGAACGGCCAGCCGAAGCCAGCCGAGACCGGCAGACAAATCCCGGCAATTCATACTTCATGATCGAGTGTTTCAC
GCGAGCGTTTTCGCGCGTTTTCGTTTCCGTTTTCGACAGGTCCTCACGGATGCGAGCCCAACCAGTTCCGTTGCAATAAT
AAGCAGTGTGTCAGCAAGTTGTGGCGCTGCGACGGCGACAAGGACTGCGCGGACAACAGCGACGAGGAGAACTGCGCGCC
GGCTCCCCCAGGATCCCCGTGCCGTTACAACGAGTTTGCCTGCAGCAGCAACAAGCAGTGCATCCCGAAGACCTACCACT
GCGACATGGAGCGCGACTGCTTGGACGGCAGCGACGAAGTTGGATGTTGTCACTCCCGTTTATATCGTGAAACCTCCGCC
GCCGATGGTCGTCCTAATGCCGGGCGACATGTTGGTCCTCACCTGCACGGCGATCGGTGTCCCAATACCAGAAATCAATT
GGCGTCTCAATTGGGGCCATGTTCCCGCGAAATGCACAATTGTATCTACGAACGGAACGGGCACGTTGACATGTCCGGAC
ATACAATCGCAGGATCAGGGCGCGTACTCGTGCGAGGCGTTGAACGCCGGAGGCTTCGTCTTCGCCGTGCCGGACGCCAT
CGTTGTCGTGAAGGAGAACGGCAACATCTGTCCGAGAGGCAAGTTCAATTCCGAGGCGAAGAGCCCCGACGAGTGTATCT
CGTGCTTCTGCTTCGGCGTCGCCACCGAGTGCCGCAGCGCCGATCTCTTCACTTACCAGATCCCGCCGCCGTTTGATCGT
TACAAGATCGTGTCAGTCGAAACCGTTCCGACGATTAGGATCCACGGCGACGTTAGCAATCAGATATCCCAGATCCGCCC
ACTCGGCCGGGACGGCGTTCAATTGCTGGAGTCCTTCAGCAATGACCTGAATGTCTACAATGTTCCCTACTTCGCGCTGC
CGGAGAACTATCACGGCAGTCAATTGAAGTCCTACGGCGGCTTCCTGAGATACTCGATCCGCTACAGTGGCAACGGCACA
CCGAACAACGCACCTTCCGTCATTTTAAGCGGCAACAATTATATCCTGATGCACAAGGGTGAACAGCCAACGCCGGACTA
CGAGAACGAGAGATCGGTCAGATTCTTCTATGGCGATTGGTACAAGCAGCAAGGGAGAAGCGAGGTCTTGGCTTCTAGGG
AGGAAATTATGATGACGCTGGCGAACGTAGACAACATCCTTATAAAAGTGAAATACGACGACTCGCCACAGCTGGACGTT
CGTCTCACTAACATAGTTATGGACACTGCCGACGTTCGAAATACCGGTCTAGGATCTGCGTCCTTCGTCGAGGAATGTCA
GTGCCCTACTGGATATACTGGTCTATCTTGCGAGCACTGCGCACCTGGTTATCTGAGACGTGAGAGCGGACCGTGGCTTG
GTCAATGTTACAGAGATGAACCGCCATGTCCCCCGGGATATTACGGCGATCCCTCAAGGAACATCCCTTGCCAGATCTGC
CCTTGCCCGCTTACTAATCCATCGAACCAATTTGCCCGTACTTGTCATCTCGGCTCTGACGGGCAACCCACTTGCGATTG
TCCTCCTGGCTATGTTGGACGCAGGTGCGAACAATGTGCCACTGGTTACCAAGGGAACCCTCTTATTCCCGGAGATATGT
GCGTTCCACTTCAACAATGTGACCCCAACGGCAGCCTCAGTTCTAACGCCGATCCACATACTGGAAAATGTCATTGCAAG
CAATACGCAACGGGCCTCACTTGTAACCAATGTAAGGCAAATACCTTTAATCTGGCTTCGACGAATCAATTTGGATGTAT
ATCTTGCTTCTGCATGGGTATTACCAATAGATGCGTCTCCTCTAATTGGTACAGGAACGAGAAAACGTATTATCAAATTA
AAGCGAGTTTTAATCAGTCACTTATTCGTGTATCGTTTACCAACTCGATCCGAGACTTCTCCTTGATCGAATCTAAGAGC
ACTGATGCACCGGACATCGTGGAGGGAATTCATCTAAACACCATCAATCGGGAAATAGTCTATAGCGATTTTCCGAATCG
TGGTAACAACGATGTCTACTACTGGCAGTTGCCCAGCATTTTCCTAGGGGATCAAGTAACATCCTACGGCGGTAATCTCA
AGTACACCGTCAGATACGTGCCTTCTCCGGGCGGTCAAAGTTCAAGGAACAACGCCGCGGACGTCGAGCTCATCAGCGCT
AACGACATCAACTTGCTCTACTACTCCCGCGAGTCTCCCGAACCTAACTCCCAACAATCGTTCACCGTACCATTGCTCGA
GCAATATTGGCAACGTAATGACGGAACTCAAGCGGACAGAGAGCATCTTCTAATGGCCTTGGCGGATGTACGAGCCATCA
GAATCAAAGCCACTTACACGACGCATACAGACGAAGCTGCACTTTCCTTTGTGTCTTTGGATACCGCTGAAAAATACAAC
ACGGGTAAGGCGCGTGCGGTCGAAGTTGAAGAATGTACCTGTCCCGTCGGCTACAGAGGACTTTCATGCGAAGATTGCGA
TGTTGGTTATACCCGAGCCATCGAAGGTCTTTATTTAGGCATCTGCGAACCTTGCAACTGCAATAATCATTCGAATCACT
GCGATCCTGAGACTGGCACTTGTGAGAATTGCGCCCATCACACCACCGGCGAATTCTGCGAGCTGTGCGAACCGGGATAC
GAAGGAGATGCCACCCGAGGCACTCCGAATGATTGCGCGTACAGAAGGCCCAAACCCGAGCCATGCAGATGTAACGAGGC
TGGTTCGCGCGGTATTTCTTGCGTCGACGGCCGATGCGAGTGCAAAAGGAATGTCGAGGGTCCAGAATGTAATCGATGCC
GCCCGTCGACATACGGATTACGCGCCGAGAACATTGATGGATGCATCGAGTGTTATTGCAGCGGGGTAACTGATCAATGT
CACGAGAGCACATTGTACGTACAGCAAATACCGATGTGGGTATACGACTCACATCACGGCTTCACTCTCACGGATTCGAC
TAGACGTGACATAATCGACGATGGTTTTGAACTGAACGTGGCGATGAACGAAATTGGCTACCGTTATACGGACAACAGGA
ATCGCAGGCTGTTCTGGTCGCTGCCGAGCGTCTTCACCGGTAACAAAGTGAAGAGTTATGGTGGAAACTTGACACTGACG
CAGCATATCACCGCGTATCCTGGCGCTCAGAGTTATAAGGATCAAGACATTTTGCTGATTGGCAACGGCATCACATTGTT
CTGGACGAATCCAGTGGAGCTTCAGCCTGAAATTCCACTGACCTACTCCGTCCCGTTAAAAGAACACGAATGGAGACGAC
TGACCACCGAAGGGCCGCGCAGCGCTTCCAGAACGGATCTCATGATTGTGCTTTCTAATTTGGAAGCTATCTTGGTCCGC
GCATCCCACAGCGAACGAATGACCGCAACATACATCAGCGACATCAGTATGGACACAGCTGTGGAGAATGTGATCGGAAA
TCGACGAGCGACTCAGGTCGAGGCTTGTCGTTGCCCGACTGGTTACACGGGCACTTCCTGCGAAACCTGCGCCCGCGGTT
ATTACAGGGACACCAGCGATCGATCTGTCAGTTATCTGGGCAAATGCAATATCTGTCCATGCAACAAGAATGAGGAAAGC
TGTGAGATCGACAGATCCGGTTATATCAAATGCCATTGCCTACCAGGTTACATCGGGCAGTATTGCCAAGACAATGATGT
TGGAGAACGGCCAGAAACAACTACGCCAAGGGACGGCGGTCCAATAACTCCACCAAGGATCATAGTTTACATACAAGAAC
CGGAATTCCAGATCGTTCACACCGGAAATACTGTTCGATATCATTGTTCAGGCAGATCCAGAGATAGCGACTCAGTGACC
ATTAGATGGGAGAAGGAAGGTGGCCAATTACCGCCTGACAGAAGCGTGGACGACGCGAGAGGATTGTTGGTCATTACGGA
TATAAAGGTGTCTGATAGCGGCATATACGTCTGCCAAGTGAGCGATGGAATAAACATCGGGTATAAGAAAGTTACGCTGA
CTGTTGGA
PEP:
>PB21670-PA
MRSIATQSSSQSRDRRKCVSTIRLPAATATVFPNRTSATVNSTAPMDPTRCGAVSRTASRSQPRPADKSRQFILHDRVFH
ASVFARFRFRFRQVLTDASPTSSVAIISSVSASCGAATATRTARTTATRRTARRLPQDPRAVTTSLPAAATSSASRRPTT
ATWSATAWTAATKLDVVTPVYIVKPPPPMVVLMPGDMLVLTCTAIGVPIPEINWRLNWGHVPAKCTIVSTNGTGTLTCPD
IQSQDQGAYSCEALNAGGFVFAVPDAIVVVKENGNICPRGKFNSEAKSPDECISCFCFGVATECRSADLFTYQIPPPFDR
YKIVSVETVPTIRIHGDVSNQISQIRPLGRDGVQLLESFSNDLNVYNVPYFALPENYHGSQLKSYGGFLRYSIRYSGNGT
PNNAPSVILSGNNYILMHKGEQPTPDYENERSVRFFYGDWYKQQGRSEVLASREEIMMTLANVDNILIKVKYDDSPQLDV
RLTNIVMDTADVRNTGLGSASFVEECQCPTGYTGLSCEHCAPGYLRRESGPWLGQCYRDEPPCPPGYYGDPSRNIPCQIC
PCPLTNPSNQFARTCHLGSDGQPTCDCPPGYVGRRCEQCATGYQGNPLIPGDMCVPLQQCDPNGSLSSNADPHTGKCHCK
QYATGLTCNQCKANTFNLASTNQFGCISCFCMGITNRCVSSNWYRNEKTYYQIKASFNQSLIRVSFTNSIRDFSLIESKS
TDAPDIVEGIHLNTINREIVYSDFPNRGNNDVYYWQLPSIFLGDQVTSYGGNLKYTVRYVPSPGGQSSRNNAADVELISA
NDINLLYYSRESPEPNSQQSFTVPLLEQYWQRNDGTQADREHLLMALADVRAIRIKATYTTHTDEAALSFVSLDTAEKYN
TGKARAVEVEECTCPVGYRGLSCEDCDVGYTRAIEGLYLGICEPCNCNNHSNHCDPETGTCENCAHHTTGEFCELCEPGY
EGDATRGTPNDCAYRRPKPEPCRCNEAGSRGISCVDGRCECKRNVEGPECNRCRPSTYGLRAENIDGCIECYCSGVTDQC
HESTLYVQQIPMWVYDSHHGFTLTDSTRRDIIDDGFELNVAMNEIGYRYTDNRNRRLFWSLPSVFTGNKVKSYGGNLTLT
QHITAYPGAQSYKDQDILLIGNGITLFWTNPVELQPEIPLTYSVPLKEHEWRRLTTEGPRSASRTDLMIVLSNLEAILVR
ASHSERMTATYISDISMDTAVENVIGNRRATQVEACRCPTGYTGTSCETCARGYYRDTSDRSVSYLGKCNICPCNKNEES
CEIDRSGYIKCHCLPGYIGQYCQDNDVGERPETTTPRDGGPITPPRIIVYIQEPEFQIVHTGNTVRYHCSGRSRDSDSVT
IRWEKEGGQLPPDRSVDDARGLLVITDIKVSDSGIYVCQVSDGINIGYKKVTLTVG
Swiss-ProtLeucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
SUPERFAMILYSSF48726  Immunoglobulin superfamily     
Gene3DG3DSA:2.60.40.10     
PfamPF00053  Laminin_EGF; Laminin EGF domain     
SMARTSM00408     
ProSiteProfilesPS50835  IG_LIKE; Ig-like domain profile.     
ProSitePatternsPS01248  EGF_LAM_1; Laminin-type EGF-like (LE) domain signature.     

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