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Gene detail [Fasta]

Species Pogonomyrmex barbatus
GenePB12202
Positionscf7180000349947:271997..276598[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/pbar_10/?name=PB12202
sequence mRNA: 
>PB12202-RA
GATCGTATGATCGTTTGTAATTTTGTGACTACTACGTTTTTGACGTTTCGTCGACTGTTCCGGAATATTGACGGCTGCGT
GGATTTATTCGACGTGATTGAAGACGTTTGAGGCCGGCAACGGCAATGGGAGATCCTGGTGGTTGGCCACCGGGCCAGGA
GAATGATTTTCCCAATTTCCAATCGAATGACAGCTTCAATTTGAATGAAGTCACTGGTATCGATGATCTTCTTACAAATT
GCGAAAGTGAGTTGCTAAAAAATGAACTGTTTAGTGACGAAGCTTTTCTTTCCGAATTGGAAGAACCTATGGCAGGTGGA
GATACATTTGATTTTTTAAATCTCAACAACAATGAGTTTAAAAATTTCAAAGATTTCAAGGATCCAATTATCCTTGAGCC
ATCAAATACGAATGTAATGGTAACACAACAAACGGATAGTAATCAATCTGTTACCTATGTACAACAGGATATTACATCAG
TAATGCAAAATAGATCACAAAAGATAGTGGCTTCAGCGAAACCTACAGTCTTCAGCTCTCAGTATGCAATACCACAAAAT
GTGAATTTTAATGTGCAATCGCCAAATGTTGTGACACTAGCTCCAGTTACTCAACAGCCACAGTTACTTTTACCAGCCAA
ATTAATCAAGTCAGAATCTCTCGTATATTCAAAGGGAATTCCTGTGGTACTGGACACTGATAAAGTACAAATTAATCGTC
TAAACACAGGTACACATGTGGGTGTACCAAGAGTAAGAGAAGTGAAACGCAGTGCTCACAATGCTATCGAGCGTCGTTAT
AGGACGTCGATCAACGATAAAATAATTGAACTGAAAAATATTATAGTTGGAGTCGATGCCAAATTGAACAAGTCTGCAAT
TTTGCGAAAAACCATCGATTATATTAGATTTTTGCAGAATGCCAATGCAAAATTAAAAACTGAGAATATGGCGCTGAAGT
TGGCTGCTCAACGACAAAATCTTCGTGATATGTTAGTGTGCGGAGACCTTACGCCTCCACGCTCCGATTCAAGCGAACCA
TCTTTGTCACCTGCACCCGCGCCGTTATCACCGCCATCACCATCTTCGGTAAAAGACGATCCGGACGCATTGCAAAATTT
ACACTCTATACCTACTTCATCCAATGGAGGCATGAGAGATCACACTCGACTGACACTATGTGGATTTATGCTATTATTTT
TAGCATTCAATCCTCTCGGTATTCTTGTAAATAATATTGGAAGATTCAATTATGATTACGTAAATACGAAACTGGATGGA
CGAACGATACTCAATTATCAAGATCAATCGGAATTGGATAAGCAGTTGTGGAGCAATGTTATTCTTTGGTTTACTAATCT
GATACTCTTAGCAGTTGGTCTTTGTAAACTATTATTGTACGGTGATCCTGTTTTGCCTACTGACAGCAAAGTTTTTCTCG
AAGTACGTCGTTGGCGAAGTCAAGCTGAATTTAATATATCTAAGCATGAATGTAATCAAGCATACCGAGATTTACATCAA
TGCCTGCAGTATTTTGGCCGATCTTTTCCGTTATCACGTACGGAGATTTTTCTTGCTACCACTTGGCAAATAGTGCGACA
AGTTCTTCATAAATTATGGCTAGGTAGATGGGTTATGCAAATCAGCAAATGGTTGTCGGAAAAATCAGATCGGCAGCAGG
CAGAGACATCCGCTGTGGAGATCGCTATCGTTTATCAACATATGCTTTGCCTTCGTATGTCTGAAGGAACGAAAGATTCG
ACATTGTATCTTGCCCTCTGTGCTCTCAATTATGCGGAAGCTGCTAGTGAAAGCATGCCGAAACCGCTTTTGGCAGAGAT
CTATGTGAATGTTGCGCTGTGTCTGAAACAATCTCTCTTTCCATACATACATAAATATTACTTGGGTAAAGCGCGTGTCT
TGTTATCCTCCTGCACCGTCCCTCCGAAATTGAAATGGATCATGACCGACGAAGGCGCAAAATTTTTAGCGTCACAAAAG
TGGCAATACAAGAAACAGCCCAATAGCGAATTTACGTCGCAAAGCAGTCGAGCAGATCCGTTATCGTACGCAGCTCGTGC
GTATAGAGATCACTTGATTGAACAATGTCTACGTTTGTTAACTGGTACAGTTGGAGAATGTCATGCATCTTCTGTACTCG
AGTTAGGACGCATCATCATGGCTTCTGCGGAACTTGTGAAGACGAGATTGGATTATGGTGGGGGGGCGGTAATCTGCGCT
GCTGCAAGTTGGAGATTGGGAGAAGAAGATTCCAAGGCGTGGAGTATCGTGGAGAGTAAATTTCCATACGAAAGGAACTT
CCAAATTAGCAATAATAGCAGCAGCAGCCCGTTACCTCATGCTGTACTTAATGTTCTTCATGCGGCGAAATATCCCACAA
AGTTAGTTTCTATGCGTTTCATCGATCAGGCGGGACTACTGCTCGAACAATCTATGGTATATTATCATTGCAAGGAGAAA
TCATCGCAGCAAATCTTGCTTACTCAGTTATGGATTTGTGATTGGCTTCTCGAGATACGTACAATTTTATGGCAAGAATT
GGACACGGAACCAGAAAGATCAATCGCAAGTATATCTCTTGCTGGATTCCAACGTGATTTGGCATGCTTAAGGCAATTAT
GTCAACACATTCCGTCTGTGTTGGCGCGAGTGTTCCTGTACGAGGCTACGGCGCGCATTATGGCAGGGGCGACACCAGTA
AAAACTCAGATCTTATTAGATCGAAGTTTGCATCATAGAAATTCACGTTCTTCGATTATATGCGGGAAAGATCGGTCACA
AGAGCAAAACAACGGCGAGAGAGAGCATGCGGTCGCGTTATGTCTCGCATGTAGACATCTGCCGATATTGCTATTAGCTT
CACCAGGAGAACGCGCCGGCATGCTTGCGGAGGCTGCCAAAACGCTCGAGCGAATAGGGGATAGAAAACGCCTTCAGGAA
TGTTACAAATTGATGCGACAGCTAGGTTCCGCAATCACTGTTAATTAA
PEP: 
>PB12202-PA
MGDPGGWPPGQENDFPNFQSNDSFNLNEVTGIDDLLTNCESELLKNELFSDEAFLSELEEPMAGGDTFDFLNLNNNEFKN
FKDFKDPIILEPSNTNVMVTQQTDSNQSVTYVQQDITSVMQNRSQKIVASAKPTVFSSQYAIPQNVNFNVQSPNVVTLAP
VTQQPQLLLPAKLIKSESLVYSKGIPVVLDTDKVQINRLNTGTHVGVPRVREVKRSAHNAIERRYRTSINDKIIELKNII
VGVDAKLNKSAILRKTIDYIRFLQNANAKLKTENMALKLAAQRQNLRDMLVCGDLTPPRSDSSEPSLSPAPAPLSPPSPS
SVKDDPDALQNLHSIPTSSNGGMRDHTRLTLCGFMLLFLAFNPLGILVNNIGRFNYDYVNTKLDGRTILNYQDQSELDKQ
LWSNVILWFTNLILLAVGLCKLLLYGDPVLPTDSKVFLEVRRWRSQAEFNISKHECNQAYRDLHQCLQYFGRSFPLSRTE
IFLATTWQIVRQVLHKLWLGRWVMQISKWLSEKSDRQQAETSAVEIAIVYQHMLCLRMSEGTKDSTLYLALCALNYAEAA
SESMPKPLLAEIYVNVALCLKQSLFPYIHKYYLGKARVLLSSCTVPPKLKWIMTDEGAKFLASQKWQYKKQPNSEFTSQS
SRADPLSYAARAYRDHLIEQCLRLLTGTVGECHASSVLELGRIIMASAELVKTRLDYGGGAVICAAASWRLGEEDSKAWS
IVESKFPYERNFQISNNSSSSPLPHAVLNVLHAAKYPTKLVSMRFIDQAGLLLEQSMVYYHCKEKSSQQILLTQLWICDW
LLEIRTILWQELDTEPERSIASISLAGFQRDLACLRQLCQHIPSVLARVFLYEATARIMAGATPVKTQILLDRSLHHRNS
RSSIICGKDRSQEQNNGEREHAVALCLACRHLPILLLASPGERAGMLAEAAKTLERIGDRKRLQECYKLMRQLGSAITVN
Swiss-ProtCentromere-binding protein 1
KEGG     K07197  SREBP1, SREBF1; sterol regulatory element-binding transcription factor 1     
SUPERFAMILYSSF47459  HLH, helix-loop-helix DNA-binding domain superfamily     
Gene3DG3DSA:4.10.280.10     
PfamPF00010  HLH; Helix-loop-helix DNA-binding domain     
SMARTSM00353     
ProSiteProfilesPS50888  BHLH; Myc-type, basic helix-loop-helix (bHLH) domain profile.     
CoilsCoil

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