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Gene detail [Fasta]

Species Pogonomyrmex barbatus
GenePB15666
Positionscf7180000350172:399943..404355[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/pbar_10/?name=PB15666
sequence mRNA: 
>PB15666-RA
ATGATCGATTACGTTAAATGCCTTGAGTGTGGAACAGAGAAATCAAGAGAAGATACATTTCTTGATATCCCGTTACCAGT
TAGACCGTTTGGAAGCAATGTTGCATATAATAGCGTGGAGGAAGCGATCAGAGCGTTTGTCCAATACGAAACATTAGAAG
GAACTAATCAATATCATTGTGAAAAATGCGATAAAAAATGCGATGCACATAAAGGATTGAAGTTTACGAAGTTTCCGTAT
TTGTTAACTTTGCATCTCAAGCGGTTTGACTTCGATTACAAAACCTTCCATAGAATCAAGCTCAATGATAAAGTCACGTT
TCCAGATATATTAAATTTGAACTCCTTCATTTCGTCCACAACGAGTCAAGAATCTCCAGGTGGTGAAGAGGATATTGGCT
TAGGTATCAAATACGATGATAGTTCCACGACAGATAGTGGTACTTTAGACGACGATTGTGTACCATGTGACAATAGCCTT
TCAAATAGTAATCATTCGGTCAGTCATGATCAGGATGATGATGAAGGTATTGATATGAGCAATGGCCCGTCAACGTCGAA
TTGTATTACGCACAATCATGAAAATGAAAAAAATCGTAGTACTTACATGCTGGGAAAAGGCCCATACATGTATGAATTAT
TTTCAATCATGATTCACAGCGGTAGTGCGAGCGGAGGTCATTATTATGCTTATATAAAGGATTTCAGGACACAAGAATGG
TTGTGCTTTAATGATCAAAGCGTAACTCAGATTACTCATGATGATATTCAAAAAACGTATGGCGGTGGACCTTCAAGGGC
ATATTATAGCGGTGCATATAGCAGTAGTACGAATGCATATATGCTCATGTATAGGCAAATCGATCGTACCCGTAATACTC
TACCTATGCAAACTGAAGATTTTCCACGACATATTCAGGAGCTATTAAAAAAAATGAAGGAAAGTGAAGATAATGATAGA
AAAAATCGTGAGAAACAAATGTCTATACCCAGATTAAAGGTATACTGTCATCATCCCATAGAAGGAAAATTGATGAATGT
TAAATTATATGTTATGCCTGATATTACTTGGGCCGAAGCAACAGAGAAAGCATATAAGAAATTTGGTCTTGAAAATGTAG
TGAATCTGGATCAGTGTCGTTTAGTTAGTTATGAACATAATACCGATTTAATAGAGTGTAGTTATGATGATCGAGAGCAT
GAACCTGTTGGAAATATATGGCGATTTTCACGTCGATTTGATTGGTTGTTAGAAATTCGTCGTAAAGATCAAAAGTTTGA
GACATATTTACCAGGTGGAGTTGCAACTAAGGTATTTGTCATAGATGTAACTCGAGAGGAGGTAATTGATGGTCCCATCG
ATATTCGAGGTTTATTGTCGCAAAGTGTTAAAGAATATAAACAAACCGTAGGAAAAATTATTAATATGGATCCTAAGCAA
ATGAAAGTAATATTGCGAAAATATCCGGAAACTAGACCAGTCGAAAATGATGATAGTGATCTTCAAACTGAAGGATTTTA
TAATGCAAATAAAGTATTTATATCAACGATGTACGATATAGATAATAACAAATCTTTTCAAGAATCAACAGTACATAGAA
TCATTGAGAATTTTAGACATGTTATCTCTTTAAACGTCCAATTACCAGACACCAGTAAAGAAACATTGGAAGAATTAAAT
ATCCCATTGTTGGATGATAAATATGAAGAGAAGGAGAAATCTGTTGCCAGTGGTCCGTCTAAACTTGACATCGAAATTAT
TGGAAAGTTACATTGGGATGCCAATTTAAAATACAATGAAACCTCGAAAAGTTGTACACGAAGTAATGAAGATACCACTA
TACGAAATATAAGCCCTCAATTAGGAGAAGCTGAAGAATGGAATACTCCTGAACAAAGCAATAGTGAAGATAGTAGCCTT
AGCGATAGTGATAAAACGTTGGTCGGTGATGCACCAGAGGGTGTTGATATTGAACCACAATCGTGGCATAGGCGTAACTA
TAGGGACTATAAGATTTCAAAGCAATTTGAAATAGAAAATTGGGATATCGATGACGACTCCGATTATTATTTTAGAGCTA
CGCCATATGCAGATAGTGTACCTGTGGAATATTTTAAAGTTTTCCGTCTATCAAATTCTGGTGAAACGGAATGTAGCTGT
TTGACAGACCAACTTAATTCGTATGAGGATGGTGAGAGACTTAATGTGAAACTCGGAAGAGCTTTGCGTAATGGAGAATT
TAAAGTAAAATTATATCAATTATTGATTGATTCCACTGAGCCTTACAAATTTTTATGCGAATGGATTGTCTCGAAAGATA
TGACAGTCGGACATGCAAAGAAAGAAATATTGGCAGAGATAAAAAGAAAATATGATATAGATATACCATATGAAAAATGC
CGACTTAGGAAAAAGTATTATAAAACAGCCTCAAAAGTATTCCTAAATGAACAGAAGTTTGAAGATCTTCGATTTCATTC
GCAATTTGAAATGATTGTTCAAGAACTACCAGATAAAGAGACAGTCACAGATACTACTCAAATTGTCTTGTTTGTCAGAA
GGTGGTTGCCAGCAAAATTACAATTGGGGCAATTTCAAGAAATTATTATGGATAATAGAACTGTTGAAGAACTAAAAAAG
AAACTTTCCTCAATATCAGATATTCCGGAAGAACATATAGATATAGCAAAGGGAAAAGGTAGTTTTCCATGTGACAATTC
GGTGCTTCGAATCCAAAACGAGCATGATTGGAATGAACATCATGATAGGTATAATAGGGAAAAGCCAAAACAATTGAACG
CTGACGAGGTAATGGAGATCGCTGTTAAGGAAAATTCACGGTTAACGCCGCTTTCTACTACTTCGAGTTACAGTCCACGT
CGAGAGAGAGCACTTAAAATATATTTGGATACTGAATGA
PEP: 
>PB15666-PA
MIDYVKCLECGTEKSREDTFLDIPLPVRPFGSNVAYNSVEEAIRAFVQYETLEGTNQYHCEKCDKKCDAHKGLKFTKFPY
LLTLHLKRFDFDYKTFHRIKLNDKVTFPDILNLNSFISSTTSQESPGGEEDIGLGIKYDDSSTTDSGTLDDDCVPCDNSL
SNSNHSVSHDQDDDEGIDMSNGPSTSNCITHNHENEKNRSTYMLGKGPYMYELFSIMIHSGSASGGHYYAYIKDFRTQEW
LCFNDQSVTQITHDDIQKTYGGGPSRAYYSGAYSSSTNAYMLMYRQIDRTRNTLPMQTEDFPRHIQELLKKMKESEDNDR
KNREKQMSIPRLKVYCHHPIEGKLMNVKLYVMPDITWAEATEKAYKKFGLENVVNLDQCRLVSYEHNTDLIECSYDDREH
EPVGNIWRFSRRFDWLLEIRRKDQKFETYLPGGVATKVFVIDVTREEVIDGPIDIRGLLSQSVKEYKQTVGKIINMDPKQ
MKVILRKYPETRPVENDDSDLQTEGFYNANKVFISTMYDIDNNKSFQESTVHRIIENFRHVISLNVQLPDTSKETLEELN
IPLLDDKYEEKEKSVASGPSKLDIEIIGKLHWDANLKYNETSKSCTRSNEDTTIRNISPQLGEAEEWNTPEQSNSEDSSL
SDSDKTLVGDAPEGVDIEPQSWHRRNYRDYKISKQFEIENWDIDDDSDYYFRATPYADSVPVEYFKVFRLSNSGETECSC
LTDQLNSYEDGERLNVKLGRALRNGEFKVKLYQLLIDSTEPYKFLCEWIVSKDMTVGHAKKEILAEIKRKYDIDIPYEKC
RLRKKYYKTASKVFLNEQKFEDLRFHSQFEMIVQELPDKETVTDTTQIVLFVRRWLPAKLQLGQFQEIIMDNRTVEELKK
KLSSISDIPEEHIDIAKGKGSFPCDNSVLRIQNEHDWNEHHDRYNREKPKQLNADEVMEIAVKENSRLTPLSTTSSYSPR
RERALKIYLDTE
Swiss-ProtUbiquitin carboxyl-terminal hydrolase 13
KEGG     K11857     
SUPERFAMILYSSF54001  Cysteine proteinases superfamily     
Gene3DG3DSA:2.20.210.10     
PfamPF00443  UCH; Ubiquitin carboxyl-terminal hydrolase     
ProSiteProfilesPS50235  USP_3; Ubiquitin specific protease (USP) domain profile.     
CoilsCoil
ProSitePatternsPS00973  USP_2; Ubiquitin specific protease (USP) domain signature 2.     

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