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Gene detail [Fasta]

Species Pogonomyrmex barbatus
GenePB21126
Positionscf7180000350312:1986632..2001021[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/pbar_10/?name=PB21126
sequence mRNA:
>PB21126-RA
ATGTGTAACGCTCAGTTTGAGGTTAGGGTCCATGATGTCGCGATCTTCGTCAAATGGATCTCCGATCTTGGTTTCTATGC
ATTGCCTGCCAAAGAAGAACTGAGCCCAATGTTTCCACACAATTCTAGTTCACATGAGATTTCTACAGAAACAAATGCCT
TCGTACAAAATTCCATGGGGGATGTAGTAGTATTAGAGGAAAGCAGTCTGGATGGGGTGGAGGAAGGGGAAGGATCAGAG
CACATTAGGTACTGTGATATCGAATCGATAGCAAACAGCAGCATGATGGCAGCACCTATTAGCCATCCCGAAGCTACCGC
CGCCAATGACTTTTCAACCGTCCTGCTGAACCAAGCTGGTGAGTTCAACTCAACCGGCATAGGTAAGGCCTGCCAGTCAG
TGGCGCCAGCAACCACAAAATACCCAACAAATCACCCTCAAATCTGCGATAATAATAATAAAATAAATAATCACAAGAAT
GCAGAACATAATCATCACAAGTACAGAAAGCAAAACACACCGGGCTTGCTTGGTCTGCAGCTGGGCAGCTCCGCCAATAA
CTCTAAGTCTACTTGTAAGACATTAAGTGATAATAAGACTAGCTTTAGTACTGTATACATTAGGGTACATATAAGGGTAT
GTGTAAATTTGGAAAGGGACGAAGTGTGTTACACCGTTGGGGTACCTAGCCTAGTTAGGATACCCAAGTCTGATAGTCCC
CAATGGTTGTTACGCCTCCCTAACTCTGATGACAATTACTCCTTACTAGGGTCCTGCCTTGACCTAGGCGACAACAATAA
ATTTAAGGCTAATTTTAGTTATGTAAGTAATAACAACTCCAAGTCTGTGATATTGCTCAGCTCAACCAGTTACAGTAACC
ATTACCTCCTCTTTAGTGGTGGCTTTGACAAGATAGCTGCTGTTATCCCGGTACTTTGTATTAAAAGGGACGATTCTACC
ACCACATCGAATAGTATGAAACTACTAGGTGATAAGTACGCCCTAGTTACCAGTTTTGCTCAGATCTCTAGACTGCTTGC
AAACGATAGAATTCTGGATGATTCTAACTCTGATATCCGAGTTTCGCTGAGCCGCCGAATAGTACGACACCTCTTGGAAT
CGCATTTGAATATCAACGCTCTAATATCGGTGTCCGTTCACGCTCAGAATTTCGCGATGTATGCCGCAAGTTCTTCCATT
ACGCTTATCGTTTCCAGAAACGAAGTAATTGACCACACTTTGCGATCTTTCCTGAAAAATCTCACACAACTATATGTACA
ATCTTCTATTTCTCCATTATGTAATGTCACTGTGACCGAGCTGATGCAACACATATGTGTTCCACTATTAATAATATGTA
AAAATAATGATTACAACGTTGGTAATAATTATAATGAATATTATAATAACGAGTACAGTAACGTTGGTAGTATTGAAGAA
GAAATTAATATTAGTAATAATAATAATCCAGATGTTATCGGAGACATTGTTGACATCGCTGTGTGCTACAAGACTAGTGT
AATGACTACTAATGTTAGGATCTTAGGGTCTCAAAATGATGGTATTAGTTGTACCGAAGCAACAATATATACTGTTGGTG
CTCTTTTATTTCAGGATAACAATAAGCCTCTAAACACTTGTTTTAAGATTAGTAGATATAGGGGATTGGTCACTACCGAT
CGCGAATCTAACTCTACCATTAAGTCTGTATTTAGGTCTAAGTTAAGCGATAAGTGTAATGTTAAGTTTGAAACATCTCA
TGCCGCTCGACTTGACGAATCTGACAACAGTAAGCAAGTTAAGTTGACTGTCAACATTCCTATAATGACTACCTGCAAGC
CTACGATGACGCTTACATGCCAATCAGCCACCGTCGCATCCCAAACAATTGTTGTACCTGTATCTCGGGCGGAGAGTCGC
ACGAACGACAATGAAATGCGATTGGAATATTTCAATATACTTCAAAATGACCAAATATGTATCCAATATATGTTGCTAAG
TCATACAAATGATCTTAATAAGAATGACTTGCATCGTTATGATGCAACTAAATTTAAAGACGCGCAAATTTATGCTATTG
ACAAGCTCAAGGCTAATACAACATCGAAAGATGACGCTCAGTTGATCTGCAAATATCACCGAGATACTTTTAATTACGAC
CAAAGTCGTAAAAACGATGATGATAATGCCATCATATGCAACGCCAACGAAGATTTCTCTATATCGACTACGTTATGTCA
CCTCCTAAAGCATCATGTGCGTGCGTTAATTTCTGCCTGTCGAAGAACATACGAGACGAACAAGAAAGAATACGAAGTTA
AGCGGCGTCGATTACAATCTATCTTGGACGTCCTAATTAACAAATGTGTCTCGGAGTTGTATGAAAATTACAACGAGCCT
ATTGCAAGTTACAAACAACGTTGGGGTATACCGATGGGGCTGCGATTGATAGGAGGTGGAGAGAGTTCCTTAAACAGCGG
AGGAGCTGCCAATTGGGGAACAACGCAAGCTACTACGCCGAATAATAATAATACGAATCAGAGTGGATGGGGTGGTACAC
CCGGAAATCCACCTGGGAGTGCTAATGCGCCGAATAATTGGGGTGGAAATACTGTCAATCGATCTGTTACTGGAAATCCT
AATCAAAATCAAAATCAAGGACCACCTGGAAACCAAAATAATCCGGGTAATGTGAGTAAAGTTAATAATCCCAATCAACA
ATCTAATCAACAATCTGGTCCGCCAACATCTCAATCAAATAATCCTACTCAAGGGAATCAGAATAATAACCAATGGTCTC
AGGGAAAGTCTAATAACCCAGGTGGTCTTGGGCAAAATCCGTCAGTGCAAAATAACAACAATAGTGGCGTGCAACAGCAA
CAATCTTCAGGTTCAAGCGCAAACAATAATCAGTCCAGTAATCCTACCCAAGGAGCTGTAAGCATTGGCAACACATCAAC
GACTAACAATCCGTCTACAAAACAACAACTCGAACAACTCAATACAATGAGAGAAGCACTTTTCAGTCATGACGGTTGGG
GCTGTCAAAATGTGAATCAAGACACAAACTGGGACGTGCCGACATCCCCCGAGCCAAGCATGACCAAAGACGGTGTACCG
ATATGGAAACCACCAGTGAACAACGGTACCGATCTATGGGAGGCTAATCTGCGTAATGGAGGACAGCCGCCACCTCAACA
ACAAACGAAAACACCTTGGGGTCATACTCCTGCGACCAACATTGGTGGCACTTGGGGCGAAGATGATGAAACAGCAGATT
CATCAAATATGTGGACCGGCGCACCGACGCAATCACAGCCGAGTGCTGCCCAGTGGACTGGGGCTGCCGGTAACCAAGCC
GGGTCCAATTGGGGTGATCCCAGAATAGATCATAGAGATCCAAGAGATTTACGGTCCGTAGATCCTCGAGAGATGCGTGA
TCCTCGGGATCACCGTATGTCTTTGGATCCTCGAGATCATATGCGCGTAATGGATCCAATGGCGCGCGATCCGCGAATGG
CCGATATGCGTGGCGATCCGCGTGGCATATCGGGACGATTGCATGGTGCGAATGCAGACGCTATGTGGACTCAGCCACCT
GGACCACCACACCATCAGATGAGTCACCAGCATCCCTCCGGACCACCAGCAAAGATGCTTAATCCGTCGAATATGAATCA
ATGGGCCGCACAACCGCCAAAAGATATTATGCCCGGTAAACCGTCCGGTTGGGAGGAACCCTCTCCGCCGACACAACGAC
GCAACGTGCCCAATTATGATGACGGTACTAGCCTTTGGGGAAATCCTGCCGCTAATCAACGTGCTATGCCGGGTAGTAAG
GTTTCGCATTGGAAGGATATACCTGCACCGAACTTGGCTCGTGGAGGCATGCAATGTCCACCAGGCATGCCTCAGAATAG
AATGCCAGGACAACCTGGAATGAAACCAGATGTAAGTAATCCTATGTGGGGCCATCCCGGAGCTCCAGGCGGGCGCAATG
GGACGTGGACAGATGGACCGCACGATACTGCATCTTGGGATGATCCTAAGACACCAGCTACATGGAATGAACCTCCATTG
AATCCAGGTTGGGGTGGTCCAACTGCGCATAAGCCAAAGCCTATGGGACCTGCCGGTAGCTGGACAGATTCTGATATGGA
TCCAACTCCTAGCTGGGCACATCCCGCAAAACCTACCTTAACGAAGGAAGTTATTTGGAACAGTCGCGAGTTCCGTTATC
TTTGCGATTTAGGATTTAAGAAAGAGGATGTCGAGGTAGCATTAAGAAATCGAGAGATGAACCGAGAAGAGGCATTGGAA
CTTCTCAATCAGATACGTCCTGTCGATCAGTGGAGACGTCATGAGGCACACTCGGGTTACGATCCGACGCATCAAGCGAC
TACCACACCAGCCTATCCCCGATTCAATCATGTTGGACAACAGATGTCATTTCCTCCGGGTGGAGGAGTCCCCAGTGGGG
CAACCAGTGGGGGCGTAGGTGGTTCTGTCACCAGTGCTAGTCTTCTCAAGCTTCAACAACAGCAACAACAGCAGACAGCT
GTTCCGTTACAGCAGCAACAGCCAAGTACCAATACACCACAACCTCCTTTCAATCAGACATCTCGTGCATCACAAAATCA
ACCCAGTACACAGCAATTGCGGATGCTTGTACAGCAAATTCAACTGGCTGTACACGAAGGATATTTAAATCACCAGATCT
TGAATCAACCGTTAGCACCTCAAACTTTGATGTTATTGAATCAACTGCTGCAACAAATTAAAGTTTTACAGCAGTTACAT
CAACAACACTCTATCCAGAATACAATGAAGGGAAGCAATCAATCAGCCCTACAGATCAGTGTTCAAATTACGAAGACCAA
GCAGCAGATCACAAATTTACAAAATCAAATTGCCGTACAGCAAGCAACATATATGAAGCAACAACAACAACATCCAGCTC
CTCCGTCGCAGGCATCGGAGTATTATAAATCTTCCGTACACGATCCTATGACAGCTCTGCACAATTTTAGTTCAGATTTA
ACATTGAAAGAGCCTCCAGTGAGTCAACAACAGTCGAGATTAAATCAATGGAAATTACCATCGCTTGATAAGGATGGCGA
TTTGGTGTCGAACGAATTTTCTCGAGCTCCCGGAACTACGAGTAAACCTCCTGCAACTCCTGGTGGCTTGACTCAATCAC
ATAGTAGTCCGAATATGAATCCCTTGCTAGGTCAAGGAGATGGCACGTGGTCTTCTCGACTCGGTGATAGCGGTTGGCCT
GATCCGAGTAACAATGATTCAACTGACGGAAAAGATTGGCAACCAGGTGGAGCTGCATATACAGATCTTGTACCAGAGTT
TGAACCAGGAAAGCCATGGAAGGGTACCCAGATAAAAAGCATCGAGGATGATCCTAGCATCACTCCCGGCTCTGTTGTGC
GTTCTCCATTATCCCTGGCTACTATCAAGGATTCCGACACAATTTTTTCATCGAGCAGTAAAACTTCTCCACCACCGCAA
GCAGCTAATCCTGATACATCAATCCCGAGTTTGAGCAATTCTACATGGACATTCAATCCACCAGCTACTACACCTAGTAC
ATTTACTAGCACTTCCAAGAATACATGGGGAGAATCCGCTCCTCCACCCACTGCTGTTACTTCCGAACTTTGGGGTGCAC
CAATGAGCAAAGCGCGTGGTCCACCTCCTGGTTTGAGTAGTAAAGGAACTACAAATACAAGCAATGGCTGGGGTGCTGGT
TTAGGAAGTGTTAGTAGATCGTCTAGTTCATGGGGTCTCCAATCATCCACCGTCAGTAATTCGGGTTGGATGTCTACATG
GCTTCTGTTAAAGAATCTTACTCCACAAATTGATGGTTCAACTTTGAAAACTCTGTGTATGCAACACGGACCAGTTCAAG
ATTTCCGTCTTTACCAAAATCATGGAATTGCTCTGACTAAATATTCCTCTCGCGACGAAGCAATCAAGGCTCAAGGAGCC
CTAAACAATTGCGTCCTGGGTAACACAACGATATTTGCCGAATCGCCCGCGGAGAGCGAGGTGCACACGATTCTGCAGCA
ACTCGGTCATGGTGGACAGCAGCAGGCCGGCGGTTCTGGAGGAGCCGGTTGGGGCCTTAGACCAACTAATAAAGCTGGTC
CGCCACCCGATACATGGGGAGGCAGCTCTAGTCAACTCTGGGGCGCTCCGCCCACCAGCAATTCCCTATGGAGTAACGCG
GGAATTGACAACAGCGATCAGCAACGAGCAACTCCCAGTTCTCTCAACTCGTACTTACCGGGAGATCTTTTGGGAGAAGA
TCAACCTGGACCAATTACAACGGTCTCTTCATTAACATATTGGTGCATGTATCGCGTGCGATTTGCCACGACGCATAACG
ACGACGAAGTGGCGTTCTCGTCGTTCTAA
PEP:
>PB21126-PA
MCNAQFEVRVHDVAIFVKWISDLGFYALPAKEELSPMFPHNSSSHEISTETNAFVQNSMGDVVVLEESSLDGVEEGEGSE
HIRYCDIESIANSSMMAAPISHPEATAANDFSTVLLNQAGEFNSTGIGKACQSVAPATTKYPTNHPQICDNNNKINNHKN
AEHNHHKYRKQNTPGLLGLQLGSSANNSKSTCKTLSDNKTSFSTVYIRVHIRVCVNLERDEVCYTVGVPSLVRIPKSDSP
QWLLRLPNSDDNYSLLGSCLDLGDNNKFKANFSYVSNNNSKSVILLSSTSYSNHYLLFSGGFDKIAAVIPVLCIKRDDST
TTSNSMKLLGDKYALVTSFAQISRLLANDRILDDSNSDIRVSLSRRIVRHLLESHLNINALISVSVHAQNFAMYAASSSI
TLIVSRNEVIDHTLRSFLKNLTQLYVQSSISPLCNVTVTELMQHICVPLLIICKNNDYNVGNNYNEYYNNEYSNVGSIEE
EINISNNNNPDVIGDIVDIAVCYKTSVMTTNVRILGSQNDGISCTEATIYTVGALLFQDNNKPLNTCFKISRYRGLVTTD
RESNSTIKSVFRSKLSDKCNVKFETSHAARLDESDNSKQVKLTVNIPIMTTCKPTMTLTCQSATVASQTIVVPVSRAESR
TNDNEMRLEYFNILQNDQICIQYMLLSHTNDLNKNDLHRYDATKFKDAQIYAIDKLKANTTSKDDAQLICKYHRDTFNYD
QSRKNDDDNAIICNANEDFSISTTLCHLLKHHVRALISACRRTYETNKKEYEVKRRRLQSILDVLINKCVSELYENYNEP
IASYKQRWGIPMGLRLIGGGESSLNSGGAANWGTTQATTPNNNNTNQSGWGGTPGNPPGSANAPNNWGGNTVNRSVTGNP
NQNQNQGPPGNQNNPGNVSKVNNPNQQSNQQSGPPTSQSNNPTQGNQNNNQWSQGKSNNPGGLGQNPSVQNNNNSGVQQQ
QSSGSSANNNQSSNPTQGAVSIGNTSTTNNPSTKQQLEQLNTMREALFSHDGWGCQNVNQDTNWDVPTSPEPSMTKDGVP
IWKPPVNNGTDLWEANLRNGGQPPPQQQTKTPWGHTPATNIGGTWGEDDETADSSNMWTGAPTQSQPSAAQWTGAAGNQA
GSNWGDPRIDHRDPRDLRSVDPREMRDPRDHRMSLDPRDHMRVMDPMARDPRMADMRGDPRGISGRLHGANADAMWTQPP
GPPHHQMSHQHPSGPPAKMLNPSNMNQWAAQPPKDIMPGKPSGWEEPSPPTQRRNVPNYDDGTSLWGNPAANQRAMPGSK
VSHWKDIPAPNLARGGMQCPPGMPQNRMPGQPGMKPDVSNPMWGHPGAPGGRNGTWTDGPHDTASWDDPKTPATWNEPPL
NPGWGGPTAHKPKPMGPAGSWTDSDMDPTPSWAHPAKPTLTKEVIWNSREFRYLCDLGFKKEDVEVALRNREMNREEALE
LLNQIRPVDQWRRHEAHSGYDPTHQATTTPAYPRFNHVGQQMSFPPGGGVPSGATSGGVGGSVTSASLLKLQQQQQQQTA
VPLQQQQPSTNTPQPPFNQTSRASQNQPSTQQLRMLVQQIQLAVHEGYLNHQILNQPLAPQTLMLLNQLLQQIKVLQQLH
QQHSIQNTMKGSNQSALQISVQITKTKQQITNLQNQIAVQQATYMKQQQQHPAPPSQASEYYKSSVHDPMTALHNFSSDL
TLKEPPVSQQQSRLNQWKLPSLDKDGDLVSNEFSRAPGTTSKPPATPGGLTQSHSSPNMNPLLGQGDGTWSSRLGDSGWP
DPSNNDSTDGKDWQPGGAAYTDLVPEFEPGKPWKGTQIKSIEDDPSITPGSVVRSPLSLATIKDSDTIFSSSSKTSPPPQ
AANPDTSIPSLSNSTWTFNPPATTPSTFTSTSKNTWGESAPPPTAVTSELWGAPMSKARGPPPGLSSKGTTNTSNGWGAG
LGSVSRSSSSWGLQSSTVSNSGWMSTWLLLKNLTPQIDGSTLKTLCMQHGPVQDFRLYQNHGIALTKYSSRDEAIKAQGA
LNNCVLGNTTIFAESPAESEVHTILQQLGHGGQQQAGGSGGAGWGLRPTNKAGPPPDTWGGSSSQLWGAPPTSNSLWSNA
GIDNSDQQRATPSSLNSYLPGDLLGEDQPGPITTVSSLTYWCMYRVRFATTHNDDEVAFSSF
Swiss-ProtZinc finger CCCH domain-containing protein 4
KEGG     K18412     
SUPERFAMILYSSF54928  RNA-binding domain, RBD superfamily     
Gene3DG3DSA:3.30.70.330     
PfamPF00076  RRM_1; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)     
CoilsCoil

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