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Gene detail [Fasta]

Species Pogonomyrmex barbatus
GenePB20308
Positionscf7180000350299:411..7262[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/pbar_10/?name=PB20308
sequence mRNA:
>PB20308-RA
ACACGTAAATTTCTTCAATTTTCGCATGTGTCATCATTTCGTGATCCGATCGGGCATAAAAGGAAAATTAATTTTACTTT
CTTACTTAGAAACGGATAAATTAATCAGAGGTTAGTCCTCAACGAGACGTCGAGTGCGACTGATGATCGTCGAGAATCGT
CGTAGATTGGCAAAATGTCGAAAATACGACGACTGTCGGTTCGTGGGATTCGTAATTTTGGCGATGACAGCGAGGATGCG
TTGATTCGCTTTTCCTGCCCGATGACGCTCATTCTCGGTCCGAACGGCACGGGGAAAACCACCATCATCGAGGCACTAAA
ATTCGTGACGACCGGCGAGTTCCCACCAAATTCCGACAAAGGAAAATCCTTTATACATGATCCTGCACTGGCGACAACTG
GCTCGGTTAGAGGTGTTGTCAAATGTGAAATAGTTGATTCAGCGGGTCAAATTTTTGTAAAAACAACAATAACTAATCGA
TGTGCCGATATATATGTAGAAGTTGGTGCAGCGTTGGGTGTTTCAAAATCAATTCTGAATTACGTCATATTCTGCCATCA
AGATGAGCTTAACTGGCCATTTGATCAAGGGAAAGCATTGAAAGAGAGATTTGATGAGATATTTGATAGTACGAGATTTA
ACAAAGCTTTGGAGACTATCTCGAAATTGCAAAAAGAACTACAAGCTGATATTCGAAGCTTAAACGCAGAGAAACAGAAA
TTCAAGGTGCTCGTGTCCGAAGTTGAGGATAAAGAAAATAAGCTTAAGGATCATAAAAAAAGATTGGACAGCGTAAAGGA
AAAAATAAATGATATCGATAAACAACTAGAACCTGTGAAACAGAAAATCGAAGAAATGCAACAGTTTAATTTAGAATACA
AAAATGTTCAGGCTGAGGAAGAAAAAAAGAAGATGGAATACAATATACATAAAGATCAATATGAAAAATTGAAAGATACC
TTAAAAAATATATTTGAAGGGACAACAGAGGAATTGAAAGCGCTCGTTGAATCGTACGACACAACATTGAGAGAAAAAAA
TATTGAAATAAAAGAGAATGAAACCGAGATAAAAGATATCTCCATGAAGGAAAGTAGGATCTCAAATATCTTAGCGACGC
GAAGAGAAACTGTAGGCACATTAAAACAGCAAGTGATAGATTTTGAATCTAAAAAAAGGCGCCGCAATCAGTTATTGAAC
GAAGCATTGCAAGTTTGGAATTTCGATACAGTGGAATCAGATGTATCTGAGATAGAGGTGAAGGCTCTTACAAAAAGATT
GGAACAGAAGATGCGGGAATTAGAGAAACGGGTAGAGGAAAATAGATTGGCCATGCAGAGTGAAGAGAAAAAATTACAAG
CAGAAGTTGATATATTGCGTAGCAATTATTCAAAGATAGAATCGAAGAAAGTTTTGAAAGAAAAAGAAATAACAGAGATA
AGGGAAGAAATAAATACAATTCGAAATCAAATAACACAGATTGGTGCAGCAGGAAACAAATTAAAGTCTATCGAACAAAA
ACTTCAAATGGCCAAACAAAAAATTGATGAACTTAACAACTCAATGAATATTGATTCTGTAAAAGCCGATATTGGAGAAA
AAATAAAATCCAGAGATAAGATTGAAGCAAGTTTAAGTGCGATTGACGACGAAATTTCTGCTTTGCATAAGTTGAGCTCG
TTGACGGCGGAATTTGAATTAAAAAAGTCGGCATTACAAACCAAGGAAGAAGAGCTAGAAAGTTTGAAGAAAAAACATGG
AGATAGCATCAAAGCATTGTTAAATATTCAAGAATTGGAACAAACGAAACTAAAGGATACTTTGGAACGTATTCATCAAA
AATTGGAAAAAGAAACAAATAACTTGACACGAGAGATTCAAGCACAAGAACGTAAAACTACAGCTTTTGAAACAACAGTA
CGGCATATAGAGTCCGACATTAAGAAAAAAACGATGGAATTATACAACGATAAAGAAAAGATATCTACAGTCTGCGATTA
CAAAGATTTTGATGAGACTTTGTTGATGCAATCAACGATAGTAAAAGATCTTCAGGACAAGAGAGGAATTTATGCTTATC
AGGCTACAGCTTATAAGGAATATATTAAAAAGTTATCTGTAAAAAATCCTTGTTGTCCCTTGTGTCATAGAAATTTTGAG
AAGCAAGATAAAGTTACAGATTTAATAAAAGAGATGGAAGGTGACATAATACGTAATCAACCTAATCGTTTAAAATCATG
CGAGAGGGAACTAGAGAAAGAACAGAAGAAATATGATGATATGCTGCAATTAAAACCCATTGTCGAAAAAGTTATTAAAT
GTGAAGAGAATGATTTGAAAATATTAGAGGAGAAACTGCAGAAAACGAAGAATAGTGTAACACAGTCAAAGATGATTATT
AAGAATTTAGAAGCTTCAAAGGAAAAACCCGAGAAAAAATTGTTATTGTATAAAAATATGATTGGCGATATCAAATTTTG
GGATCGGTGTATAGATGAGATACAGCAATTGAAGAAGACAGTTAAAAACATGGAAACTCAAATGGCCAACGCTGGAGTTA
AGACCGAAAGAACTATAGAGGAAGCGCAGGCACAACGAGATACTTTAAAAACATCTCTTAGAGAAATTCGTAATAATATC
GATGCGTTGCAACTCAAATTGGGCAAGCATAATGAGAGACTGCAAGATGCTAGAGCTATGTATAACGGGTTACATGAGGA
GCAATTGAAAATACATTCTGATATGCAGAAATTGAAACACTTGAAGGACAAGCAAGAGGACTTGTATACGCGAGAGATCA
CCGTGGGAGAGACAGTGGAGAAACTACGGAAGGATCTGACGGATGCTGAGACTCAATTGGATTCTGGAATTCAGCGATTG
GAAAAAATCAAGGCGGAAAACTGGACAAAGCAAGAATCCGAGAGAAAATCGATTACTGAAAATTCCAGACGCTTATCCGA
CTTGCATAAAATATTAAACGAGATCGAGTCTTTTATTAGTAGCAAGATACTGGAGAAACTCGAGAATTACAAGCAGGAAA
TAGAGACTTACGAGAATTCGCTAAAGGAACTTACGAATAAGAAAAACGATATAGAGCAAGTTCAAGAAGATACCATAGCC
AATCTAAAAGCTTATAACAAAATATTGGATACCGCAATGATTGAATATCACGAAGAACGTATGTCGACGGTTAATAGAAT
AATGAAAAAGCTGTGGAAGCACATTTACAAGGGTACGGATACAAGCAGCATAGAAATTTGTACGGAACCTACAGAGGGTG
TAGGCAGCAACAGAAGAAGTTACAATTACAAACTGGTTCAAACTAAACACGGCTGTAAAATGGATATGAGAGGACGTTGC
AGTGCTGGACAGAAAGTATTAGCGTCGATAATTATAAGACTCGCATTGGCAGAAACATTTTGCAAGGATTGTGGTATTCT
CGCTTTGGACGAACCAACGACAAATCTGGATGAAGAAAACGCGAACAGCTTAGCCGATACGCTAACTAATAATCTAACGT
GTATAATACATGGTGGTTACAGGGTGGTTGAGCTGCGATCGAGACATCAAAAAAATTTCCAGCTGATTATAATCAGCCAT
GATGAAAAATTCTTACAAAAGCTTGCTGATTTAAATAATCACAAACAATTCCATGAGCTTTATCGCAAACACACTGGAAT
GACGGCGGTGAAGATCTCAGATTTCAACGAACCCACAAGTTCCTTATTGCACGTTAAAAGTGAAGATGAATCTGATGAAG
AAGATCAACGTGCCAATCAATTTGGACAGTCAACCAGCGGCTTATCTAAACAGACATCAAGCAAGAAAAGGTTTAACTGG
AATGACTCCAATGAAGATGAGCCGCCACCTAGAAAGAAATATCATTTCGAATAA
PEP:
>PB20308-PA
MSKIRRLSVRGIRNFGDDSEDALIRFSCPMTLILGPNGTGKTTIIEALKFVTTGEFPPNSDKGKSFIHDPALATTGSVRG
VVKCEIVDSAGQIFVKTTITNRCADIYVEVGAALGVSKSILNYVIFCHQDELNWPFDQGKALKERFDEIFDSTRFNKALE
TISKLQKELQADIRSLNAEKQKFKVLVSEVEDKENKLKDHKKRLDSVKEKINDIDKQLEPVKQKIEEMQQFNLEYKNVQA
EEEKKKMEYNIHKDQYEKLKDTLKNIFEGTTEELKALVESYDTTLREKNIEIKENETEIKDISMKESRISNILATRRETV
GTLKQQVIDFESKKRRRNQLLNEALQVWNFDTVESDVSEIEVKALTKRLEQKMRELEKRVEENRLAMQSEEKKLQAEVDI
LRSNYSKIESKKVLKEKEITEIREEINTIRNQITQIGAAGNKLKSIEQKLQMAKQKIDELNNSMNIDSVKADIGEKIKSR
DKIEASLSAIDDEISALHKLSSLTAEFELKKSALQTKEEELESLKKKHGDSIKALLNIQELEQTKLKDTLERIHQKLEKE
TNNLTREIQAQERKTTAFETTVRHIESDIKKKTMELYNDKEKISTVCDYKDFDETLLMQSTIVKDLQDKRGIYAYQATAY
KEYIKKLSVKNPCCPLCHRNFEKQDKVTDLIKEMEGDIIRNQPNRLKSCERELEKEQKKYDDMLQLKPIVEKVIKCEEND
LKILEEKLQKTKNSVTQSKMIIKNLEASKEKPEKKLLLYKNMIGDIKFWDRCIDEIQQLKKTVKNMETQMANAGVKTERT
IEEAQAQRDTLKTSLREIRNNIDALQLKLGKHNERLQDARAMYNGLHEEQLKIHSDMQKLKHLKDKQEDLYTREITVGET
VEKLRKDLTDAETQLDSGIQRLEKIKAENWTKQESERKSITENSRRLSDLHKILNEIESFISSKILEKLENYKQEIETYE
NSLKELTNKKNDIEQVQEDTIANLKAYNKILDTAMIEYHEERMSTVNRIMKKLWKHIYKGTDTSSIEICTEPTEGVGSNR
RSYNYKLVQTKHGCKMDMRGRCSAGQKVLASIIIRLALAETFCKDCGILALDEPTTNLDEENANSLADTLTNNLTCIIHG
GYRVVELRSRHQKNFQLIIISHDEKFLQKLADLNNHKQFHELYRKHTGMTAVKISDFNEPTSSLLHVKSEDESDEEDQRA
NQFGQSTSGLSKQTSSKKRFNWNDSNEDEPPPRKKYHFE
Swiss-ProtCoiled-coil domain-containing protein 18
KEGG     K10866  RAD50; DNA repair protein RAD50 [EC:3.6.-.-]     
SUPERFAMILYSSF52540  P-loop containing nucleoside triphosphate hydrolases superfamily     
Gene3DG3DSA:3.40.50.300     
PfamPF13476  AAA_23; AAA domain     
ProSiteProfilesPS51131  ZN_HOOK; Rad50 zinc-hook domain profile.     
CoilsCoil

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