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Gene detail [Fasta]

Species Pogonomyrmex barbatus
GenePB21301
Positionscf7180000350314:611798..620674[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/pbar_10/?name=PB21301
sequence mRNA: 
>PB21301-RA
ATGGAAACTCCAGAAGGAAAATATATAATTTCGTACCTCGCACAGGTGGAGGCCACGGACAATGACGAGGGTGAGAACGC
CGAGATAACGTACAGTATCTATCACGTGTCGAACAACGGCTTGCACAAGTTCAAAATAGATTCGAAGACCGGAGTTATCG
AGTCCGTGAGGAAACTGAACGCTGGCGAGCAATATAGCATCACCGTACAGGCCAACGACAAGGGTGGCAGGTTCTCGCAG
ACAATCGTCGAGGTGAACGTCATTCCCGGGCCCAACACCAGAAGCCCCGTGTTCCAGCAACCGGTGTACGAGGTGCAAGT
CAGCGAGGGGGCCTCCATCAATTCCACAGTCGCGACTATCACCGTGAGTATCCTCGATATGATGTTTGTCTCGGCCATCG
ACCCAGAAAACGATCCCGTGTCGTACTCGATAGTATCAGGGAATGATTTGCGCCAGTTCGCGATCGGCGACAAATCAGGC
GTTATTACCGTTATAAGGAAGTTGGATAGGGAGGACTTGACCCGATATCAGTTGTTGATAAAGGCCGAGGATACTGGTGG
TCTATATAGCACCGCGACGGTTAACATCATGGTCACCGATATCAACGACAAGAACCCCGAATTTGTGGGTCTCCCTTACG
AATTTTCCGTGAAGGAGGGTGAAGAGCGCAAAGTAATCGGCCGCGTGCATGCTGAGGATGCCGACGAAGGCATAAACGCC
GAAATTACTTATTTCGCACCCGATGACATTCCCTTTACCGTGGATCCTGAAACTGGTGAGGTTCTAACGAAGATAGTGTT
GGACTACGAGCAGAACGACGAATACAAATTTGTGGTAACTGCGAGGGATGGAGCTCCCGATTATCGTTTAGCAACCGCGA
CAGTCACAGTGAAAGTTATAGATGTCGAGGACGAGGTTCCGGTCTTTCACCAAAGCAATTACGAGGCACGTGTCAAGGAA
AACGTGCCTGACTATAATGTAATTCAAGTCACGGCCGATGATCCGGACACAAAGAAGCAAATTACATACATGATCAAGCA
AGGGGATACCGAACTCTTCGCCATAGACCCGAAGACCGGAGTCATAAAAACTATCCGCGGTCTCAATTACGAAAGCCAGA
GCCAGCATGTACTTATCATAGGCACCGAGGAGAACACCAGCGATCTACCTGGTTCCACTACCCGCGTTGTTATTAACGTT
CAGGACGTGAACGACAATCCGCCGGTATTTACGATGGTACCGCGTCCCATTACGTTGGACGACGACGTCCCTATAGGAAC
GACTGTGATCAATCTCACAGCTGTCCAAGTGCGTGCGTACGACATGGGAGAGCCACAATTGTCAATCGTGACGACCGTAC
CGGTCTACGTTCGTCATGTGGCGACGGTACCACCGGAGATCGGTTTGGGTTTCGCGGAGAACTCGTATAACGTCGAGGTA
CCTGAGGACGCGGGCGACAACACGCTAATAAAGATAATTACCATCATCAACAGTCACGCATACGACACGCCGCTCAAGTG
CGAGATTTACAGCGGCAATGAGGAAGGCCTATTCGACGCGAATGTCACGGAAGAGCGAAATTGCGCACTGAGACTGAAGA
AAGGAGCGTTAGATTACGAGACAACGGAATCTTACCAGATTAAAATCAAGCTGGAATCGCTCTCGGGTCTTTTAAACTCA
GGCAGAAACACGACGATGGTGAAGATTCAGGTATTGGACGTAAATGATAACAAGCCCGAATTTATCTTCCCGGAGACAAG
TCAGAAGCTTACAAGAGGACGTTACTTTGCGGCGATTCCCTATACCGCACAATTCGCATCTACCGTCGTACAGGTGAAAG
CTCACGATAAAGACAACGGGAAGTACGGCAAGCTCGAGTACAAGATCCTGGAAGGACGTGGCTCTGATTACTTTGCTGTC
GATAGCTCCACCGGCATAATTAGGACAACGGTGACATTCGATCACGTGGATGCATCCGAACTTCCTTTCAAGTTTGACGT
TCGCGTACGCGATAACCCTAACTCGACCGACAACTATAACTCGATCGTTGCCCCGGTGATCGTTAATCTTATCGGGGAAG
AAAACTTGATGATCTTGGTGGTGCAAGATGCGGCGCCGGAAGCGCTGCAAAAGGAAGCCGGAAAAATAGCAAATGTAATC
GAGCAGAGGAGTGGCCTGCTGATCGGCATCGACAGAGTCGCAGTAAGAAAGATCCTCACGAAGAATGGTACTATCGAGAC
GTTCCCACAGGACTCTGACGTGTGGTTTTACGCGGTCGATCCGGATACCGAGGTTATACTGAGTAGAAACAGCACCAGAG
TGCAGAGAAGTCTGAATTCTCTTACTGAGAGCCGTATGGTCGACAGGTCCATCATGGATAAATCGGCCATGTCAAACATT
ACCTTTGACGTGTCTACATTAGTGCGGGCAAATGCCATCGACATTCACGCACCCGTGATGCCACCGGAGCCAATTCGAAC
ACAAACAGCGGTAGCATTCAGCGGCGAGGTATTCCCGTACGCGCTGATTACCATTGCCTGCGTGATTCTGATCCTCGGCA
TCGTCGCGTACAAGGAACGTATGCAGCGCATGTACGTGGTGCCACGATACGATCCCGTCTACGTGGAACCCAATTTGAAG
GAATACGAGACGCAGGTACTCCAGATGAGCGTGCCGGTTGACGACAACGATAGCTGCAATGACTTGCAGTTGGACTTCAG
CAACAAAAATCACGCGTTCAGTCTGGACAACGTCAGTTACATCACCAAAGATCACGGAGATAGTACTGGCCAACAAAGTC
CCGTTAGCTCCGAAGCGGCGACCACGGCACGAGCGTCCAGCATCGTCGGTAATCACGGCGACACCAATATCCATTCCCTA
CGACGGTCCACGTTGGGCCGAAAGAATCATAGCGCGAGCAACACGAACACCCTGAACAATCGCGATGCCACACCGGTACT
TAATCCCCTGTACAATCACGGCAATGATCTGCTGAGCCCTAGTCCGTCCAATGACAATGTCACCTTCAGGGAGAGGAAGG
ATTATTCGCATCTCGGCTTCACGTATCTGGGCGAGCAAAGCCCGGTGGAAACCACGACAGAATTGTAA
PEP: 
>PB21301-PA
METPEGKYIISYLAQVEATDNDEGENAEITYSIYHVSNNGLHKFKIDSKTGVIESVRKLNAGEQYSITVQANDKGGRFSQ
TIVEVNVIPGPNTRSPVFQQPVYEVQVSEGASINSTVATITVSILDMMFVSAIDPENDPVSYSIVSGNDLRQFAIGDKSG
VITVIRKLDREDLTRYQLLIKAEDTGGLYSTATVNIMVTDINDKNPEFVGLPYEFSVKEGEERKVIGRVHAEDADEGINA
EITYFAPDDIPFTVDPETGEVLTKIVLDYEQNDEYKFVVTARDGAPDYRLATATVTVKVIDVEDEVPVFHQSNYEARVKE
NVPDYNVIQVTADDPDTKKQITYMIKQGDTELFAIDPKTGVIKTIRGLNYESQSQHVLIIGTEENTSDLPGSTTRVVINV
QDVNDNPPVFTMVPRPITLDDDVPIGTTVINLTAVQVRAYDMGEPQLSIVTTVPVYVRHVATVPPEIGLGFAENSYNVEV
PEDAGDNTLIKIITIINSHAYDTPLKCEIYSGNEEGLFDANVTEERNCALRLKKGALDYETTESYQIKIKLESLSGLLNS
GRNTTMVKIQVLDVNDNKPEFIFPETSQKLTRGRYFAAIPYTAQFASTVVQVKAHDKDNGKYGKLEYKILEGRGSDYFAV
DSSTGIIRTTVTFDHVDASELPFKFDVRVRDNPNSTDNYNSIVAPVIVNLIGEENLMILVVQDAAPEALQKEAGKIANVI
EQRSGLLIGIDRVAVRKILTKNGTIETFPQDSDVWFYAVDPDTEVILSRNSTRVQRSLNSLTESRMVDRSIMDKSAMSNI
TFDVSTLVRANAIDIHAPVMPPEPIRTQTAVAFSGEVFPYALITIACVILILGIVAYKERMQRMYVVPRYDPVYVEPNLK
EYETQVLQMSVPVDDNDSCNDLQLDFSNKNHAFSLDNVSYITKDHGDSTGQQSPVSSEAATTARASSIVGNHGDTNIHSL
RRSTLGRKNHSASNTNTLNNRDATPVLNPLYNHGNDLLSPSPSNDNVTFRERKDYSHLGFTYLGEQSPVETTTEL
Swiss-ProtUbiquitin carboxyl-terminal hydrolase 17-like protein 10
KEGG     K16500     
SUPERFAMILYSSF49313  Cadherin-like superfamily     
Gene3DG3DSA:2.60.40.60     
PfamPF00028  Cadherin; Cadherin domain     
SMARTSM00112     
ProSiteProfilesPS50268  CADHERIN_2; Cadherins domain profile.     
PRINTSPR00205     
ProSitePatternsPS00232  CADHERIN_1; Cadherin domain signature.     

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