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Gene detail [Fasta]

Species Pogonomyrmex barbatus
GenePB16279
Positionscf7180000350193:127814..130803[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/pbar_10/?name=PB16279
sequence mRNA: 
>PB16279-RA
TTGGTGTCGAGTCGGCCAGACGCTTCCGTGGCTCTCTTAGCGTGGGAATCGGTCCGCTTTAGCCAATGTTATAACAAACG
AGGCCGTTCGCGCGTTCCATGACTTCCCCACTCGATCACACGTTAACAGAAGATGACAGTATTAGAAACAGAGGAAGACG
CAGATAAACGCTCGGTTCCTCCTAGAAAGAAGTTCTGCCTGTCCCTGTCGGGTCGTGGACGTGCAATTCCCATCGTCGTC
CCACAGCCCCCTCCTACATCTACAAGAGGGGGCCTTTTGGATAGACCAGATTTCACACTTGGTACAAGCAAAATGTTGAA
TGGTTATCGAAATCAGCTGAGCAATCACCAGGATGGAAGTTACGACATGCCTAGTGGCAGTACGGAAGGATTGAAGATAG
CTACCTTATGCAATTTAGGAAATACCTGCTTCCTCAATAGTGTATTATATACTTTAAGATTTGCGCCTTCTTTTCTGCAT
AATTTACATCATTTAGCTACTGATTTGTCTAATTTAAATGACAAGCAACTTCAAACAAAAGCCAAATCTTCCTCGTTAGG
TAGAACCGGTGTATCGCTAACATCAAGCAATAGTCGTAGTTGGAGCAGTAAGGATCTATTGGCACTAGCTGGATCAACAG
CAGAAGCTAATAAACCACGTATTCAAATAGCCACTGAGAGATTACATGAGCTCTTCATGGCATTGCGAGCATCAGAGATG
AGGGAAAACAGTGAACCATACCAACCAGATGCCTTTTTACAAGCTCTTAGAGAAGTAAATCCGATATTTGAGGGAAATCA
GCAGCAGGATGCTCACGAGCTTTTGGTCTGCTTGCTTGACAACATTAGGGAGACTTTCCAACTCTTGGTCAGACATAGAG
AAAGCCAATTTGGCCAAAGCAATGGTGGTTTTCCTGAATTTATTGCAAACCACTCGACAACAGAGACACAGTCAGAGAGC
AGTAGCTCTGGAAAAAGGAGCATTCGTAAATCTAGGAAGAAAAAGAAGATCACAAGCAGGGGAAATTCGGTATCTCTCGC
GCAGCCGAATGCGAATGGCGTTGCGGGGTCTGCAAGATTATACGAGAATGGTCACGCGGAATTCGCCGAGAGTAACGGTG
AGATAGGTACACGCAAGCCAGAAAGTAAGAAATGTTTTATTTCTGAGGACTTTGAGGGAGTCAGTTTATTGCGTACAACG
TGTCTCGAGTGTGAACACGTAACCGAACGAAAGGAGACGTTCTGCGACATATGTGTACCCATTGACATTGATCGTTCGAA
CGAGAAAGATGATAATGAATTGGACAGCAGTGAGGTATACAAGCGCGCTGTAGTAACTAGTGAATTGCTTTGGGGTAGGG
ATAAGTACTGGTGTGCACGGTGCCTACGGTATAATGAGGCTCGCAGAGCCGTTTGTTTTCCCTCTTTACCTAGACTTCTT
ATCTTGCAGTTGAAGAGATTTTCTACTGCCGCTGGTTCAATGGAAAAAATCAATAATCACATGCCAACACCATTTACCTT
GCAATGCTTCTGCGAGGAATGTAGTAATGATGAAACTCATGGGATGACAGCTGATGGTAATACAGAAACGCGACACGTGT
ACAAATTATATTCGGTCATAATGCATCAAGGTGCGACAATGACTGCAGGGCATTACGTCGCTTATACTCGTTTACCAGAC
GAGCCTGCGTATGCGGAGTATTCTCAATGCGATCGCGATAATAAACGGCAAAATCCGAGCCAGACTAGTGCCGCGAGCGC
AAACTCTTCATCGTCGTCCTCTTCTTCTTCCGATAAACCATCGGGCATACTCAAGTATTTTAGAAGTAGCAAACCCAACG
CGAGCGAGAATAAGGAGCAATTAGTGAATAGAGTCGGTTGTCGTAGCATGGACTGTTGCGGCATCAGGCGCAACAAACAG
GGCGTCACCTGGTTGGAGTGCGACGACGAAGCGGTTCATGTGATCCCACTACGAGAACTTGAAGACAAACTGGCACCCAA
CGCGCGGAACTCAGCTACTCCCTATCTTCTGTTTTACGTGAGGTCGACGATGTAA
PEP: 
>PB16279-PA
MTVLETEEDADKRSVPPRKKFCLSLSGRGRAIPIVVPQPPPTSTRGGLLDRPDFTLGTSKMLNGYRNQLSNHQDGSYDMP
SGSTEGLKIATLCNLGNTCFLNSVLYTLRFAPSFLHNLHHLATDLSNLNDKQLQTKAKSSSLGRTGVSLTSSNSRSWSSK
DLLALAGSTAEANKPRIQIATERLHELFMALRASEMRENSEPYQPDAFLQALREVNPIFEGNQQQDAHELLVCLLDNIRE
TFQLLVRHRESQFGQSNGGFPEFIANHSTTETQSESSSSGKRSIRKSRKKKKITSRGNSVSLAQPNANGVAGSARLYENG
HAEFAESNGEIGTRKPESKKCFISEDFEGVSLLRTTCLECEHVTERKETFCDICVPIDIDRSNEKDDNELDSSEVYKRAV
VTSELLWGRDKYWCARCLRYNEARRAVCFPSLPRLLILQLKRFSTAAGSMEKINNHMPTPFTLQCFCEECSNDETHGMTA
DGNTETRHVYKLYSVIMHQGATMTAGHYVAYTRLPDEPAYAEYSQCDRDNKRQNPSQTSAASANSSSSSSSSSDKPSGIL
KYFRSSKPNASENKEQLVNRVGCRSMDCCGIRRNKQGVTWLECDDEAVHVIPLRELEDKLAPNARNSATPYLLFYVRSTM
Swiss-ProtUbiquitin carboxyl-terminal hydrolase 38
KEGG     K11832  USP1; ubiquitin carboxyl-terminal hydrolase 1 [EC:3.4.19.12]     
SUPERFAMILYSSF54001  Cysteine proteinases superfamily     
Gene3DG3DSA:2.20.210.10     
PfamPF00443  UCH; Ubiquitin carboxyl-terminal hydrolase     
ProSiteProfilesPS50235  USP_3; Ubiquitin specific protease (USP) domain profile.     
ProSitePatternsPS00973  USP_2; Ubiquitin specific protease (USP) domain signature 2.     

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