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Gene detail [Fasta]

Species Pogonomyrmex barbatus
GenePB17893
Positionscf7180000350238:237341..243361[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/pbar_10/?name=PB17893
sequence mRNA: 
>PB17893-RA
ATGCCAAGTGTTTGGTCGGATTCGTCGAATTTGATAAGCGGCAAAGTATCGACATCTGACACGATAAGCGAGAATATATT
TATGAAATATTTTTGTTATGAATGTGTGAGTATTGTTTATTTCGTAGAGATTACTGAGCAGGCGACTGTATATTTTGTTT
TGCAACGTCGCAAAGGACATGGAAAAACGAAAGGGCTTACTTCTATATTGGTGGGCACATTGGACAGCGTTTTCGACACT
AAACCACCGCCCTTTAGAATTCTTCATCAGACACCGTCGTCGGAAGTTTATTGGGAGGTGGCGTGTTCCTTGACTCGTGA
AGAGATCTTACAGGATTGGGAATGGCTCCATTCAAATTTAATGACTACGCTCACATCGTTCGATACTGAGGAAGAGATAA
CGGAATTCGTTTGTTGCAAAATTCAGTCTATAATAGCAAATAGCATCCCGGATTCTCAATTTGCAGATGAAGAAGATCCA
GAATCTTTTAAAACTGTGTCTTTTAAGTTTCACCAATTATTCAATATACCCAAAGAGGACAAATTGGTCAATTATTATTC
TTGCAGCTATTGGAAATCTCGATTACCTAGACAAGGATGGCTCTACTTATCTGTCAATCATATGTGTTTTTATGCTTATA
TACTGGCAAGAGAGACCAAATTGATTGTAAGATGGACAGATATCACGGAATTGAACAAAACTAATTCCCTTCTAGTTCCA
GACAGTATACGTATCGTGACACGTGACAATAAAGAGCATTATTTTTCTATGTTTTTACATAAATCAGAAACATATTCATT
AATGGAGCAACTGACCAATATTGCTATGAAAAGACTTATCGATGAAAAAAGTGGATTTAATGAGGATAGAGATTTACTGA
ATAAATTAAGCAAAAATGTGCCTAAGAAGCCATCATTCTTGAAGAGGGATCTGGATGCACGAGCACACTCGGAAGCATAT
AGACTTCAATTTAGATTGCCAGGAACCGAGAAATTAGATGGTAGTATCGATGCAACTTTATGGACACCATATAACAAGAG
ATATGTCTGGGGAAAGATATACTTATCTCAAAATTATCTTTGTTTTGAAAGTAGGGTAAGACGACAAGTGAGTTTAGTCA
TACCTTTGAGAGAAGTAACACTTGTTGAATCAGCAGAAAATCAATCCAACACAGGAGCAGATAAGTCAATATTAGTTACA
ACAACGCGGGCATCGTTTCTATTCGCTCAAATACACGACAGAGATTTCGTGGTTCAGAAAATCTCCGAGCTCTTAGCAAA
GTCTAAGCTTAATTATATAACTAAAGATAACATATGTTCGCCGAATTCCTCAAATAACATCAGCAATTGCGAAGAAGCGA
AACTTACAGAACAATGGAAGCCTCAGCCACCATTGATGGTGCTTTTTAAGGCTCCATTGACTCCTGAAGCAGCATTAAAG
CAAGAAGCTAAAGAGAAGCAATGGGAACTCCACTTTGCGGAATACGGAAGAGGAATTACAATGTACAGAACTACGGAAAC
TGCGAAGCTCGTTATTCAAGGAATCCCGCAATCCCTCAGAGGAGAAGTTTGGCTCACCTTTTCTGGTGCCTTAAATGAGA
AGGCAATGAATCCAGACTTATATAAATCATTAGTCGAACAATCTCTTGGTAAATCGTGTCAAGCAAACGAGGAAATCGAA
AGAGATTTGCATAGATCGTTACCGGAGCATCCAGCTTTCCAGTCTGATACTGGAATTAGTGCTCTGCGAAGAGTGCTATC
TGCTTATGCATGGCGAAATCCTCAGATTGGTTATTGTCAGGCGATGAATATAGTAGCTTCCGTTCTTCTAATTTACTGCT
CTGAGGAATCAGCGTTCTGGCAGTTATGTAATGTTTGTGAATCATTACTGCCCGATTACTATGATCGGAGAGTAGTCGGT
GCTCTTGTTGACCAAGGTCTTTTAGAAGAACTGGCTGCCGAACATTTGCCAGTTTTACATGCCAAATTACAAGAACTTGG
TTTAATTAAAGTTATCTCGTTATCTTGGTTTTTAACTATATTTTTGAGCGTCATGCCAACCAGCAGTGCTGTGAATATTA
TGGACTGTTTCTTCTACGATGGGGCAAAAGTTATTTTCAGATCTTTCTTACTCTATCAGATAGCATTGACAGTGTTGGAA
TGGAATCAAGATAAGTTACTCAATTGTCGCGATGATGGAGAAGCTATGCAATTGCTAACAGATTATCTTGGTGGCGTTTA
TAACGATGAAGGTCCAATATTTCCTAGACCAGTTGATAGCACATCCCCTAATAAGGCAAGGATACACATATATTTTGGTT
ATTTCATATATTTCAGTATATCTGTTCAAACCTTAATCTATGAGGCGTACTTGAGGTATGGATCTTTGACAATTGGTTGG
ATAGAAAGATTGCGTCTAAAGCACAGACTGAGGGTAGTTCAAAGTCTCGAGGATGGAATTGAGAAGAATGTAATCAGAAG
CGTAGTCGTTGATAAATATATGAAAATAGAGGAATTGCAGGAACTATTAAGCTTAGTAAGAGAGGAATTAATGAGTCAAC
GAAAATCCGAACCCGACCGCTATGATCCAACCCAACCACCATATGAAGCGTATAAAGTAGATTTTGATTTATTCAGAATA
TTATTCGGTGGTCTGTCTCCATGGGGAAAATGCACTCAGGCTGAATCTCTTTCCGCTCGATTATTCCGTTTGATGGATCG
TAATCGCGACGGTTTGCTAAATTTCCGAGAATTAGTACAAGCTATAGGGATGACTGCGACAGCTGATTTGACACAAAGAT
TAAAATTATTGTATACATTGCATTTACCACCACTTCTTACACCTGCCGACTTTGAATCGCCAACACATTCAGCAGATGGA
GCCGAAGTAGCAGCAGAAGCTACAGATTTCTTTGATAGTATGGAGCAAAGTGTAGCTTCCTTGGAAATGCCGATTAGTGT
AGCAGAAGAGCCGACTGTAGGTACACTATCACGATCTACGAGCTTGAACAGTCAGCAAGGTGATCAGTCGTGGGAAGTTC
AGAGTATGGGTAGCTTGCGTTCGATGATAGCATCAAAGGACAGTCCATTAGATCTTAAAACCGTGCCAAAAATGTCGCAA
GGACATTTTATAGCATTATGGAAAACTCTTTACGACATGTTTCCTGCTCAACCCGAGGAACAGGAAACATATCATTGTAT
CGCTTCCATAGGCACTCTTTTGCTTCAGTTAGGAGATGTTGGCAAGAAATTTTATGTAGAGAGAGAAGAATCTGAAGATA
GCTTACTTTTAGCTGCTTCTGCAGCTCAACAAGCTTCAACGATCGAAAGGTCACCCGATCGTAATGGAAATCCATCGAGT
ATAGCATCATCTGCTGATCCCGATTGGTCGATAACCATTGAACAGTTTTTAGCGTCAGCTTTGACTGGTCAGGCAATAGT
AGACTTCTTCAGTAAACGAACCGATCTTATGGAAGCTATAACAACATTGAAAAATCGTAGATTCAATCGGGTTCATTCTT
TATCAGACACACCAACTCTGAATGGATGA
PEP: 
>PB17893-PA
MPSVWSDSSNLISGKVSTSDTISENIFMKYFCYECVSIVYFVEITEQATVYFVLQRRKGHGKTKGLTSILVGTLDSVFDT
KPPPFRILHQTPSSEVYWEVACSLTREEILQDWEWLHSNLMTTLTSFDTEEEITEFVCCKIQSIIANSIPDSQFADEEDP
ESFKTVSFKFHQLFNIPKEDKLVNYYSCSYWKSRLPRQGWLYLSVNHMCFYAYILARETKLIVRWTDITELNKTNSLLVP
DSIRIVTRDNKEHYFSMFLHKSETYSLMEQLTNIAMKRLIDEKSGFNEDRDLLNKLSKNVPKKPSFLKRDLDARAHSEAY
RLQFRLPGTEKLDGSIDATLWTPYNKRYVWGKIYLSQNYLCFESRVRRQVSLVIPLREVTLVESAENQSNTGADKSILVT
TTRASFLFAQIHDRDFVVQKISELLAKSKLNYITKDNICSPNSSNNISNCEEAKLTEQWKPQPPLMVLFKAPLTPEAALK
QEAKEKQWELHFAEYGRGITMYRTTETAKLVIQGIPQSLRGEVWLTFSGALNEKAMNPDLYKSLVEQSLGKSCQANEEIE
RDLHRSLPEHPAFQSDTGISALRRVLSAYAWRNPQIGYCQAMNIVASVLLIYCSEESAFWQLCNVCESLLPDYYDRRVVG
ALVDQGLLEELAAEHLPVLHAKLQELGLIKVISLSWFLTIFLSVMPTSSAVNIMDCFFYDGAKVIFRSFLLYQIALTVLE
WNQDKLLNCRDDGEAMQLLTDYLGGVYNDEGPIFPRPVDSTSPNKARIHIYFGYFIYFSISVQTLIYEAYLRYGSLTIGW
IERLRLKHRLRVVQSLEDGIEKNVIRSVVVDKYMKIEELQELLSLVREELMSQRKSEPDRYDPTQPPYEAYKVDFDLFRI
LFGGLSPWGKCTQAESLSARLFRLMDRNRDGLLNFRELVQAIGMTATADLTQRLKLLYTLHLPPLLTPADFESPTHSADG
AEVAAEATDFFDSMEQSVASLEMPISVAEEPTVGTLSRSTSLNSQQGDQSWEVQSMGSLRSMIASKDSPLDLKTVPKMSQ
GHFIALWKTLYDMFPAQPEEQETYHCIASIGTLLLQLGDVGKKFYVEREESEDSLLLAASAAQQASTIERSPDRNGNPSS
IASSADPDWSITIEQFLASALTGQAIVDFFSKRTDLMEAITTLKNRRFNRVHSLSDTPTLNG
Swiss-ProtKv channel-interacting protein 2
SUPERFAMILYSSF47923  Ypt/Rab-GAP domain of gyp1p superfamily     
Gene3DG3DSA:1.10.8.270     
PfamPF02893  GRAM; GRAM domain     
SMARTSM00164     
ProSiteProfilesPS50086  TBC_RABGAP; TBC/rab GAP domain profile.     
CoilsCoil
ProSitePatternsPS00018  EF_HAND_1; EF-hand calcium-binding domain.     

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