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Gene detail [Fasta]

Species Pogonomyrmex barbatus
GenePB18950
Positionscf7180000350268:519471..537672[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/pbar_10/?name=PB18950
sequence mRNA:
>PB18950-RA
ATGGCCCAGTGTTATCCCAAACTTAAAGATTACTGCAGAGAAAAACATGGTTTAGAATTTCAGGTAGTTGATATGAGATG
GGGCGTACGTGACGAAGCTACTGATGATCATATGACTACGGAGCTGTGTATGAGAGAAATAGAAAATTGTCAAAGACTCT
CCATGGGACCTAATTTCGTTGTATTTCTTGGACAGAAATACGGATATCGTCCTATACCGACATATGTCCTCAGTTCGGAA
CTAGAAATGTTAAGAACAGAATTGGAGGGTCAAGGGATGGACGTTACTCTTTTAGACAAGTGGTACAAGAAGGATAGCAA
TGCTGTACCGCCTACAAGTATATTACAACCGATCTCGTCTATTCTTAAAAATTTTAATAATAAAAGAATACCCAAATTGC
AACAAGAGGATCAGGCAATTTGGTGGGACACCATGTGCAAAATGCAAAAATTGTTCAGGAAAGGCGCACAATCTTTGTAT
AATGCTGGCAAATTTGACAAGGACACGATGCACAATTATTTCATGTCCGCCAACAGGAGTTTAGACAACGAAGCTTCAAA
ATTATTGGCCGATCTAAGAGATGAGAGGTTACCAAATAAGATCGAAAGCACGAATCTGCAAAGGTACACAGTAGAATGGA
TAGGAAGAGAGGGTTTGGATCCTGAAACTCACGGCGAATATCTTCAGCACTTTATCACTCATTTTTATAGAAATATAGTC
AAACTCGTAGATCGTGCTATGAGGAAGGAAGACAGTTCCGCTCAAGGACAAATAATAACTGAAATTTTACAACATCTGCA
CGCTTGTAATAATTCAGTGAAGGTGTTCTACGGACGCGAGGATACGTTGGAAAGAATAAAAAATTATATGTTAGGCGATA
GCGATAAACCATTAGTGCTGTATGGAGAAGGTGGATGCGGCAAGACTTCGTTATTGGCAAAGAGCGCGGGTTTGATCAGC
AGCACTTGGTTGATTGATAAAAAACCAATCAGCATAATTCGATTCCTGGGCACTACCCCGGATAGCAGTGCGCTCACGCC
TACATTGATTTCAATCTGTCAACAAATTTCGTACAATTATGGATTGCCGTTTGAAGAAATACCGGACGACTTGGTACCAC
TCACAGCGTATTTTAAATATTTGTTGACTCTAGCTAATACCCAACAGCCTATTTTGCTGTTTTTAGATAGTGTCGATCAG
CTGACAGGTGTACAGGGTAACAAATTGTCGTGGTTGCCCACGAGATTACCACCAAACTGCAAGATGATTTTATCTTGCGC
AGCGGAGGAGTCAAATCCGGTGATTTCAAGAGATTATCAGTTGCTACGCAGGATGATAGATACCGAAGAGAGCTTCATCG
AAGTAACTGCCTTGGGCGAGGATCTGGCTATGGACGTGATAAAAATGTGGATGAAAACGGCCAAAAGAGATCTGAACAAC
TACCAATGGCGTCTAGTGGCGAATGCTATATCAAAGTGCTCTCTACCGATTTTCGTGAAGTTGGTGTTCGCCGAGATTTG
CCGATGGCGCAGTTATACAAAACCGGCGGACACACATCTAGCCAGTACGGTAATGGACAGCATAATGATGCTGTTCGAAA
GAATTGAGAAACAACACGGCAAGATCCTGGTCTTTCACGCTCTGGCTTATATCACGGCTGCCAAGTCCGGCTTATCGGAG
TCCGAACTCGAGGATCTGATCTCTCTAGATGACAAGGTCCTGGACGATGTCTATCAATATCACTTGCCACCGGTAAGGCG
CATCCCGCCTTTGCTTTGGACTAGAATAAGGAACGACCTGCCTAATTATCTGAGCGAGAGAGAAGCAGATGGAGTGAGCG
TCTTGAACTGGTACCACAGACAGTTCAGGGACACGGCTAAGGAGCGATACTTCAAGAATATGAACATGGCAATGTATTTT
CATTCGATGATCGCGGACTATTATTTGGGAATTTGGGGAGGCGGCAAACCAAAGCCCTTTAAGTACACCGAGATACAAAG
GCATCGATTCAATTTAACAGACAAGGAAGGTGTAGCGGACAGGAAAGTACCGGAACAACCATTGGCATTTTATTCGAAGG
AAGGAACGATTTCGAGATACAATTTACGAAAGTTTGGTGAATTGCCATTTCATCTGGTAAGAGCACGGCGCTTTAAGGAT
CTGTTCGAAAACGTTTTATTCAACTACGAGTGGCTGCATGCTAAGCTAAGTTCTTGTCCGTTGCAAGCTGTGCTTTCTGA
TTTCGAAGATGCGTGTAATTTTGTTGACAACCAAAGTTTGGTCAGAGAACTCATGTTAGTTGCTGATGCTTTGAGATTAG
GCGGCGCAATCTTGGGAAATCATCCAGACATGCTCGCGCCGCAATTGATCGGTCGATTGTTACCAGAGATCGGTGCAAAC
GTTAATGTGAGAATGTTACTTCGGGCTTGTGATCATGACGGTGTCAAAAATTGTGCTCTGCTCCCTCTTTATCATTGTCT
ACACACACCTGGTGGACCATTGAAATACTCGTTGGAAGGTCATCAGTTTGCGGTATTCGGATTTTGCTTAACATCGGATT
ATCGCTATGTAGTATCGATATCTAATAAATTTATCACTTGGGATTTGAGTACCAGCGATATGACAAGAGATGTTAATCCC
GGCGTGGAGGGTATAATGCAACGATTAGTTTTAAGTCCCGACAACAGATATGCAGCGGCTTTTACGACCAATTACCAGAG
CGTCGTTTTGAACACCTTAACGAGCGAATTCGTCGTTATCGATAATCCTTTGTCGAATGAGGTGGTGTGTGGTGTGCATT
TAATGAATCAGTACGCTTTTATTTATGGGAAATTGGGATGGTGCAGATTCGATTTGCGAGGAAATCTACTCGATACCCAT
AGTAATCCTGAAGATTCCAACAAATGGCCGATTTTATATGTAGAATATACGAATTTGGATCATTATAGAATTGTATTCTG
GTCGGGAAGCCTTGATGATACGCGTATGCTTTTACATACTTATAGAAAAAAGATATCACTGGATCCATTTCAATTTCATA
GTGCTCTGATCATGACCAAAGATAAAAGTACTTTATACGCGTGTACGAACAAGGACGATTACAGAATCACGAAATACAGA
AGCGATGAGACCTCGTTCTACTGGGAAAAAGTTTTCGACATGCCGCGGGCATACAACGACGATGTGGAGTATCTATTGCA
ATTGAAATTGGACAGGGAAGAGGAAATGTTGTTAGCGACAACCGGGAATGGATTCATCGTATGGTTTTTGGAGAGTAAAA
GCGATGCGCATGTTTTAATGTTACCGAACGGAGTTAGGAACATCAGTACGCGAATGATGTGTTCAAACTCCGTGATGGTC
AGCGGCACTAAGAATTACGCCGTTGCTGGCGTAAGGAAAAATTTATACGTTTGGTCGCTCGAGACGTCTGATTTAGTAAA
AATACTGGACGCGCATTTTGCAAGAATTATTCAACTGGAAGCGTTGACCATCGGAAATTGGAATAGCGTTGTAACGTCGA
GTATCGATAGAAGTGTCAAGGTGTGGAACATTAACAATATTTTCGAACAAGTGCACGTTATCGACAGACACGAATTACAG
ATAGACATGATAAGCTTAGCTGAGGAGGGTAACTTGGCCGTCACGGTCACCAGAGATTGCGTGGGTGTTTGGGATTTGCT
GACCGGTCGACTAATATCAAAGCTAGCCGATAGTCCATTAGGAGCAATTGTTACACACGCTTGCATTACGCAGGACAGTA
GATATATCGTGTCGACGGAGTCGGGTAACGTTCTTGTTTGGAACAGAATTACGGAGCAAGTGTTGTTCAAGGAGGAGCAG
AAGAACGTCAAACAGTTAACGCTGATAGAGAATTCGTCCAAGTTCATAGTCGTTTCGAGACCCAATAATCCCACTGGAGT
GGAAAACGTGCGAACTACGGCGACTCTTGTCATGAGAAGTATTCCTGACGGTAAAACAATATTCTCTTTGGAATATCCTG
TAAGAAGTAATACTGGTACACCTTTCCGACAAATTGTAATAACGTCCGACGATGCTTTTCTGGCTGTACCGGCGGCCGAC
AAGGGTAACAGAGATTGTGTTATAATTTATAATGCGAAAACTGGAGCATTGGTCAGCAAAATACCTATAAAATTACCTGG
ATTCAAGATTATACGCACAATTCCAAAATGGAGTGGAAACATCAGCAAGGATGGTAAATACACTTTGTATGCACCTAGCA
GAGGCGGCCTCGAACTCATAGAATTAAAGAAAGGTACAAGTGTAAAGACATATATATCTAAGGTAGCCGAGGGTGTGTTT
ACTGTTATATCAATGTTTAATCGTACAGATGAATACGTATTGTATTATCATAGCGGTCGAAAAACCATCAGAGTTTTTAG
ATCTTTGGACTGCGAAATGATAGCAAATTACAGAGTGCAGGCTGAATTAAGTGCTATCGATAGTACGCATGATGGCAAAA
GTATCGTGTTGGGGACAGTTGATGGTTGTGTGTCAGTATTGGCGATAGCTGATCCTAAGAAGCCAGAAATGAGGGAATAT
CTCGCAAATGTACCATCTCGCGATGAACAGTGGAAGAAGAAGACCGAGAAGCACCGAGCGGCGATAAAATTTAAAGCTGC
CGCCCGGATCGCTTGCGTGACCCACGATTTATCTGCGAGCGTGAAACCAACGGGCGATGTTTCGGAAACGATCGACGAAG
CAGATGAGAATGCGGAATAA
PEP:
>PB18950-PA
MAQCYPKLKDYCREKHGLEFQVVDMRWGVRDEATDDHMTTELCMREIENCQRLSMGPNFVVFLGQKYGYRPIPTYVLSSE
LEMLRTELEGQGMDVTLLDKWYKKDSNAVPPTSILQPISSILKNFNNKRIPKLQQEDQAIWWDTMCKMQKLFRKGAQSLY
NAGKFDKDTMHNYFMSANRSLDNEASKLLADLRDERLPNKIESTNLQRYTVEWIGREGLDPETHGEYLQHFITHFYRNIV
KLVDRAMRKEDSSAQGQIITEILQHLHACNNSVKVFYGREDTLERIKNYMLGDSDKPLVLYGEGGCGKTSLLAKSAGLIS
STWLIDKKPISIIRFLGTTPDSSALTPTLISICQQISYNYGLPFEEIPDDLVPLTAYFKYLLTLANTQQPILLFLDSVDQ
LTGVQGNKLSWLPTRLPPNCKMILSCAAEESNPVISRDYQLLRRMIDTEESFIEVTALGEDLAMDVIKMWMKTAKRDLNN
YQWRLVANAISKCSLPIFVKLVFAEICRWRSYTKPADTHLASTVMDSIMMLFERIEKQHGKILVFHALAYITAAKSGLSE
SELEDLISLDDKVLDDVYQYHLPPVRRIPPLLWTRIRNDLPNYLSEREADGVSVLNWYHRQFRDTAKERYFKNMNMAMYF
HSMIADYYLGIWGGGKPKPFKYTEIQRHRFNLTDKEGVADRKVPEQPLAFYSKEGTISRYNLRKFGELPFHLVRARRFKD
LFENVLFNYEWLHAKLSSCPLQAVLSDFEDACNFVDNQSLVRELMLVADALRLGGAILGNHPDMLAPQLIGRLLPEIGAN
VNVRMLLRACDHDGVKNCALLPLYHCLHTPGGPLKYSLEGHQFAVFGFCLTSDYRYVVSISNKFITWDLSTSDMTRDVNP
GVEGIMQRLVLSPDNRYAAAFTTNYQSVVLNTLTSEFVVIDNPLSNEVVCGVHLMNQYAFIYGKLGWCRFDLRGNLLDTH
SNPEDSNKWPILYVEYTNLDHYRIVFWSGSLDDTRMLLHTYRKKISLDPFQFHSALIMTKDKSTLYACTNKDDYRITKYR
SDETSFYWEKVFDMPRAYNDDVEYLLQLKLDREEEMLLATTGNGFIVWFLESKSDAHVLMLPNGVRNISTRMMCSNSVMV
SGTKNYAVAGVRKNLYVWSLETSDLVKILDAHFARIIQLEALTIGNWNSVVTSSIDRSVKVWNINNIFEQVHVIDRHELQ
IDMISLAEEGNLAVTVTRDCVGVWDLLTGRLISKLADSPLGAIVTHACITQDSRYIVSTESGNVLVWNRITEQVLFKEEQ
KNVKQLTLIENSSKFIVVSRPNNPTGVENVRTTATLVMRSIPDGKTIFSLEYPVRSNTGTPFRQIVITSDDAFLAVPAAD
KGNRDCVIIYNAKTGALVSKIPIKLPGFKIIRTIPKWSGNISKDGKYTLYAPSRGGLELIELKKGTSVKTYISKVAEGVF
TVISMFNRTDEYVLYYHSGRKTIRVFRSLDCEMIANYRVQAELSAIDSTHDGKSIVLGTVDGCVSVLAIADPKKPEMREY
LANVPSRDEQWKKKTEKHRAAIKFKAAARIACVTHDLSASVKPTGDVSETIDEADENAE
Swiss-ProtWD repeat-containing protein 75
SUPERFAMILYSSF50978  WD40 repeat-like superfamily     
Gene3DG3DSA:3.40.50.300     
PfamPF05729  NACHT; NACHT domain     
SMARTSM00320     
ProSiteProfilesPS50294  WD_REPEATS_REGION; Trp-Asp (WD) repeats circular profile.     
ProSitePatternsPS00678  WD_REPEATS_1; Trp-Asp (WD) repeats signature.     

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