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Gene detail [Fasta]

Species Apis mellifera
GeneGB44291
PositionGroup7.22:839389..842962[GBrowse]
sequence mRNA:
>GB44291-RA
ATGTCCAACAATCCTCAGTGGAAAACGTTCCAGCCGCCAATCATGAACTCTGACCCTGCAATACTTGATTACAAGTCTAT
GACTATACCAAGTCCTAAAGTTATAACAGGATCACATCAACCAACAACTAATATCTACAGAAATGGTACCAATTATAGTG
GAGATCATTATATGATGGATTCACCTCCTGGAAATGGAAAAAACACAATACAATATGCTGGTTATCCCAACACTAAGATG
TCACGTAATGAAGTTACCAGATTTCCTTTTGGAACATTTACAGGAATGGAAGGAAGCACTGGTTATACAGAAGAACCAAC
AACAAATAACTCCACTTATCAGGATCAATCTGAAAACCAAGGAACTCGAGAAACTGGAATAATTGAAAAATTATTGCATT
CATATGGATTTATACAATGCTGTGAAAGACAAGCAAGATTGTTCTTTCATTTTAGCCAATTTAGTGGTAATATAGAACAT
TTAAAAATTGGAGATCCTGTTGAATTTGAAATGACTTATGATCGTCGGACAGGCAAACCTATTGCTAGTACTGTTAGTAA
GATTGCTCCAGAGGTGGTGCTAAGTGAAGAAAGAGTTACTGGAAATGTAACAACAGAATTGCATACAAGTGGTGATACAC
AAGGTCGTATTAGTTATGAAAATCGTGGAGAATGTTTTTTTCTGCCATATACAAAAGATGATGTTGAAGGAAATGTTACT
TTGCGTGCTGGTGATAAAGTGTCATTTCAAATTGCTACTAATCAACGTGGAAATTTAGGTGCATGTCATGTAAGATTGGA
AAATCCAGTACATCCAGTTCGCTATCGTGGAGTTGTATGCTCAATGAAAGAAAATTTCGGCTTCATTGAACGTGCTGATG
TAGTTAAAGAGATTTTCTTTCACTTTAGCGAAGCTAAGTCTATGAAAGAAGAACTTAGACTGGGAGATGATGTTGAATTT
ATAATACAAACTCGAAATGGAAAAGAAGTAGCTTGTAATATTACTAAGCTACCACCTGGGTCAATAGTCTTTGAAGAAGT
TAGTAATAAAATAGTAACAGGACAAGTATTGAAACCTCTGGAAAGAGGTACTGCAGCTCGTCATCAAAATGATCCTTTAC
CTGGAAGAATTCGGTACAGAGATACGGAACATTCTTCAGATACAGTTGAAATTCCTTTTGGTGACAAGGATCAAAAAGGA
GATTTTACTCTTAGACATGGAGATTGGGTCAAATTTCGTATTGCTACAGATACTAGAGATCAACTCAAAAGAGCTACTGA
AATATTATTATTACCTGAATCTTTTAATGTATCCGGTGAGAAACGAGAACAAGGCATTATAGCTGCACTAAAAGATGGAT
TTGGTTTTATTCGTTGTGTAGATCGAGATACACGACTTTTCTTTCATTTTAATGAAGTTTTGGATGTTGATAGAGAAATT
AGTGTAGGGGATGAAGTTGAATTCACAGTAATTCAAGATCCTTCTTCCTCATTTTCAAACAATCGACAAAGTGCAATTAG
ATTAAAGCACTTACCGGCTGGTACAGTTCAATTTGAAACAATTATCGAAAAAGATTTATTGGGTACTATAATTCAGGGTA
TAAATGGCGTTGTGCCTGGTCTAATTGGATACACAAAAGAAAATCAACAAAAAAGTGTAATTTTCTTTAGTAAAGATTGT
GATCCTAAGAATATCCCAAGACTTGGTGATAAGGTTCAATTTAGTATCTGTCAAGTAAAACGGAATAAAGAACTTGTTGC
TGTCGACATATCTCTAATGAATTCTTCCGGTGAAAAAACTCAAAATGGCAACAAAAAACTAAATGGACAAGTTTGTCAAG
GTTTTATTGCTGCACTTAAAGATGGATTTGGTTTTATTGAAACTGTAAATCATGATAAAGAAATATTTTTTCACTTCAGC
AATTTTGAAGGGGATGTTAATGCTTTAGAAGTAGGAGCTGATATTGAATGTACGATCAGTTCTGGAAATGGTAGAGGTAA
TGGTGGTTGTGTAGCTGCGGATTACGTTAAATTGGTACCTCGTGGAAGCATTCCTAGGCCAACACCAGTTAGTGAAGTGC
TTGATGGAACAGTTATTAGACCTTTACGAAGTGCAAATCCTGACCAGGCAGAGTATGCTGGCTTAATAAAAATAAATGCT
ACTAATGAAGATGAAGATACTCCGGAATATGAATTCAGAATTATGGGACTTGTCAATAAACGTGAGCTGTTACAAGCTGG
TGATCCTGTACAATTACAGGTGGATTCAGCAGGTCATGCTTGTAATATCGTAGCAGTTAGAAAAAAAAGAAGAGCAACAG
TTGATGCAGTAAAAGGCCCTTTTGGTTTTCTTGCATATGAAGTTGATGAGGGTAAGAAATTATTTTTCCACATGAGTGAA
GTTCGAGATCATGCAATACTTCAACCAGGAGATCAGGTTGAATTCGTTTTAATTACGAATCAGCGTACTGGTAAATCATC
TGCATGCAATGTAACACGATTAAGTGATGCCGTTCAACAACGACCCGAACGTTTAATCAGTCGATTGCGCACTACTTCTT
TGGAAGATACAGGTCCTAAATTAACTATAGTTAGGCAACCAAGAGGGCCAGATGGCACACGTGGATTTAGTCAAGAAAGA
TCACAGCATACTCCTGGTGCTATCCAAGAG
PEP:
>GB44291-PA
MSNNPQWKTFQPPIMNSDPAILDYKSMTIPSPKVITGSHQPTTNIYRNGTNYSGDHYMMDSPPGNGKNTIQYAGYPNTKM
SRNEVTRFPFGTFTGMEGSTGYTEEPTTNNSTYQDQSENQGTRETGIIEKLLHSYGFIQCCERQARLFFHFSQFSGNIEH
LKIGDPVEFEMTYDRRTGKPIASTVSKIAPEVVLSEERVTGNVTTELHTSGDTQGRISYENRGECFFLPYTKDDVEGNVT
LRAGDKVSFQIATNQRGNLGACHVRLENPVHPVRYRGVVCSMKENFGFIERADVVKEIFFHFSEAKSMKEELRLGDDVEF
IIQTRNGKEVACNITKLPPGSIVFEEVSNKIVTGQVLKPLERGTAARHQNDPLPGRIRYRDTEHSSDTVEIPFGDKDQKG
DFTLRHGDWVKFRIATDTRDQLKRATEILLLPESFNVSGEKREQGIIAALKDGFGFIRCVDRDTRLFFHFNEVLDVDREI
SVGDEVEFTVIQDPSSSFSNNRQSAIRLKHLPAGTVQFETIIEKDLLGTIIQGINGVVPGLIGYTKENQQKSVIFFSKDC
DPKNIPRLGDKVQFSICQVKRNKELVAVDISLMNSSGEKTQNGNKKLNGQVCQGFIAALKDGFGFIETVNHDKEIFFHFS
NFEGDVNALEVGADIECTISSGNGRGNGGCVAADYVKLVPRGSIPRPTPVSEVLDGTVIRPLRSANPDQAEYAGLIKINA
TNEDEDTPEYEFRIMGLVNKRELLQAGDPVQLQVDSAGHACNIVAVRKKRRATVDAVKGPFGFLAYEVDEGKKLFFHMSE
VRDHAILQPGDQVEFVLITNQRTGKSSACNVTRLSDAVQQRPERLISRLRTTSLEDTGPKLTIVRQPRGPDGTRGFSQER
SQHTPGAIQE
Swiss-ProtCold shock domain-containing protein E1
SUPERFAMILYSSF50249  Nucleic acid-binding proteins superfamily     
Gene3DG3DSA:2.40.50.140     
PfamPF00313  CSD; 'Cold-shock' DNA-binding domain     
SMARTSM00357     
ProSitePatternsPS00352  COLD_SHOCK; 'Cold-shock' domain signature.     

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