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Gene detail [Fasta]

Species Apis mellifera
GeneGB52346
PositionGroup2.17:1358896..1374129[GBrowse]
sequence mRNA:
>GB52346-RA
ATGCAGAAAACACTAGAGTCTGAATCTGGTAAAGAATCTGCGTCTGATTCTGAAAATGAAAGTAAGAGTGATAGCTCTTC
TTCAGGAAGCAATACAGGATCTGGTTCTGGATCAGAAAGTGACTCTAGCTCTTCAAGTGGTTCCGGATCAGGATCAGGTT
CTGATTCTGATAAATCAGAGAAATCGGATGCACCTGCACAAAGTGATAGCTTCCAGAGCAAAAGTTCAAATCACAGCACA
GAAACAAAAGTTAGGCTTAAGAATGAGTCTAGTCGTGAGTGGGATGAGAATCCTGACATTTATGGAATTAGAAGATCCGG
CCGTTCTAGGAAAGAGCCTGAAAGGCTTGCTACACAACGTGAAAGCGATAGCGATAGTCGCAAGAAATTTAAAAAAAAGA
GTTCACATAATTCATGGAATTCAGATAGTTCAGATTCTGAATCTGATGATGTTGAAAGTAGAAGACCTCCACCTAGTAAA
TCGTTAAATAGACGCGCTGCACAAAAAGCAAAAGAAAAGGCAAGAATACGGAAGAAACGTATTTCAGAATCATCTGAAAA
TTCTTCTTTTGATAGCGATGATAATAGAAGACAAGTTACAAGACGAACTGGAACTGCTATTAGTTATAAAGAAGAAAGTG
AAGAAAGGACTGATAGTGAAGATCTTGTTGAAATTGATGAAGGTAGTACTGCAAATACAGAACCAGATAATGCAGAAACA
ATCGAACGAATTTTAGGACAAAGAATTGGTAAAAAAGGAGTTACAGGAAATGTCACTACAATTTATGCTGTAGAAGAAAA
TGGTGATCCAAATCCTGAAGACTTATCTAGGGAAGAAACCGAATTGCAGTATTTAATAAAATGGAAAGGATGGTCTCATA
TTCATAATACATGGGAATCAGAAGAATCTTTAAAAGCACAAAAAGTAAAAGGACTAAAAAAATTAGATAATTTTATTAAA
CGAGAACGAGAAATCAAACAATGGAGAGATTATGCTGGACCTGAAGATATAGACTATTTTGAATGTCAATTAGAACTCCA
ACAAGATCTTTTGAAAAGTTATAACAATGTTGAAAGAATTATTGCTGAATATAATAAACCAGATTCGGAACATCCTGATT
ATTACTGCAAATGGGAAAGTTTACCTTATGCTGAAGCTACATGGGAAGATGGAGCATTAATTGTGAAAAAATGGCCAGAA
AAAATAAAAGAATTTCGTGAAAGAGAGGAGTCAAAAAGGACACCAAGTAAACATTGTAAAGTTCTTAAATCTAGACCTAA
ATTTCATCAGTTAAAAGGACAACCAGATTACATGGGAAAAGGTCGAGATTTGACTCTTAGGGACTATCAAATGGATGGAT
TAAATTGGATGATTCATTCATGGTGTAAAGAAAATAGTGTTATTTTAGCAGATGAAATGGGTCTTGGTAAAACTATACAA
ACGATATGCTTCCTTTATTATTTATTCCACACACATCAGCTTTATGGACCATTTTTGTTAGTAGTGCCTCTTTCAACAAT
GACTTCCTGGCAAAGAGAAATGTCACAATGGGCACCAGATATGAATTTTGTTACATATTTGGGTGACGTTACTTCCCGTA
ATGTTATTAGAGAATACGAATGGTGCTACAGTTCAAAAAGATTAAAATTTAATGCCATACTTACAACATATGAGATAGTA
CTTAAAGATAAAGCATTTTTGGGTGCCTTAAATTGGGCCGTATTGTTAGTAGATGAAGCTCACCGATTAAAAAATGATGA
CTCTCTCTTGTACAAAGCACTTGCTGAATTTCATACGAATCATCGTCTTTTAATAACTGGTACTCCATTACAAAATAGTT
TAAAAGAATTATGGGCCTTATTACACTTTATAATGCCTACTAAATTTGGTTCGTGGGAAGAATTTGAAAAGGAGCATGAT
AATGCCGCTCAAAAAGGCTATTCCAAATTACATAAACAATTAGAACCATTTATTTTACGACGTGTCAAAAAAGATGTAGA
AAAATCTCTACCCGCGAAAGTTGAACAAATATTACGAGTAGAAATGACATCGTTACAAAAACAATATTATAAATGGATAT
TAACAAAAAATTATAATGCATTGCGAAAAGGAGTTAAAGGTTCTACTATGACGTTCCTAAATATTGTTATTGAATTAAAA
AAATGTTGTAATCATGCTTTTCTTACAAAACCTACTGAAAATGAAAGAAAGGACAATAATGAAGATTATTTACAACAATT
AATTCGAGGTTCTGGCAAATTAGTGCTTCTTGATAAATTATTAGTGAGATTACGAGAAACAGGTCATAGAGTATTAATAT
TCAGTCAGATGGTCAGAATGTTGGATATTCTTGGAGAATATCTACAAAAAAAACATTTTCCATTCCAAAGATTAGATGGA
AGTATAAAAGGAGAATTACGAAAACAAGCATTAGATCATTTTAATGCAGAAGGATCCCAAGATTTTTGTTTTTTATTATC
AACAAGAGCAGGTGGTCTTGGTATTAACCTTGCCACTGCTGATACTGTCATTATTTTTGATTCAGATTGGAATCCACAAA
ATGATCTACAAGCACAAGCCAGAGCACATCGTATTGGTCAAAAAAATCAGGTAAACATTTATCGTTTAGTAACAAAAAAT
TCTGTAGAAGAAGAAATAGTAGAAAGAGCAAAACAAAAAATGGTTTTGGATCATCTTGTAATTCAACGGATGGACACAAC
TGGACGAACAGTATTAGATAAAAAAAATGCAGGGACCAATAATAATCCATTCAACAAAGAAGATTTAAATGCTATTTTAA
AATTTGGAGCTGAAGACTTATTTAAAGATGAAGAAGATGGAGATGAAGAACCAACTTGCGATATTGATGAAATTTTAAGA
AGAGCAGAAACAAGAGATGAAGGACCTTCAACAGTAGGAGATGAATTGTTATCTGCATTCAAAGTTGCTAGTTTTGCTGC
ATTTGAAGAAGAATCTGAACCAGTTAATCAACCTAATGATAATGACGATGAAAGTAAAGATTGGGCTGAAATTATTCCAG
AAAATTTCAGAAAGAAAGTTGAAGAAGAAGAAAAATCGAAAGAAATGGAGGATTTATATTTACCTCCACGAAGTCGAAAA
ACATTACAACAAATTAATCAAAGTGGGGAAGGAAGAGGAAGAAAACGAAAAAAATTATCTGCAGATGATAGTGAAGAAGG
TGAGGATTCTGGAAGTGAGATTGAGGGTAGTGATGATGAGCGTCCTAAAAAAAGAGGTAGACCAAGAGTTACACCACGTG
AAAACATAAAAAGTTTTACTGATGCAGAGATACGAAGATTTGTTAAAAGTTATAAAAAATTCCCTGCACCATTAAAACGA
TTAGATGATATTGCGGCGGATGCAGAATTACAAGAAAAACCAATGTCAGAATTACGTTTCTTGGGAGATCAGTTAAAAAC
TAGATGCGATACTTGTTTATCCGAATTTGAAAGTACAGCAAAAGAAAATAAAGGCGAAGAAGAGGGTAAAGGTCCTGGTC
GTAAAAGAGGTCGTGGTCCTACATTTAAAATTGGTGGAGTTATGGTTAATGCAAAATCTTTCTCAGCTGCTGTAAAAGAA
TTAGAACCTTTAGAACAAGCTTTACCTTCAGATTCAGAACAACGATCTAATTGGCATATTGACATCAAATTAAAACCAGC
AAATTTTGATTGTGACTGGAATTCTGAGGATGATTCTAGACTTTTAAGAGGTATATATCAACATGGAATGGGCTCATGGG
AAGCTATCAAAATGGATAATAATTTAAAACTTGGTGATAAACTTCTTCCAAATGGTAGCAAATTACAATTAAAAAAAATA
AATACTCGAGCCGAATATTTATTAAAAGTTCTCAAGAAACAAATTGATTCAAAATTAGGAGTGACTAAGGCAAGAAAGCC
AAGAAAACCAAAAGAAGCAAAACCTGCCATTACAAAAGAAATTATAGAAGAAAATGATAGTTCGGGTGAAGAAAGTAATA
AATCTAAATCTAAAATTGAAAAGCTACCTACAAAAAAAGAAGAAGAGATTGTTATAAAAAAAGAAACTAAAGAAGAAGTT
GAAGATATAGTAGAGGAAAAAAAGAAAGAAAAAAAAACTAAGAAAGAAAAAAAAGAAAATAAAAAAGCTAAAAAAGCAAA
ACAAGCAGCAGGTCCAATGCATTTTACTGCTAACAATGAACCAAGAGCTCTTGATGTTCTTGGTGATTTGGATCCTTCTA
TATTTAATGAGTGTAAAGAAAAGATGAGACCAGTAAAAAAAGCACTCAAAGCTTTAGATAGACCTGATCAATCTTTAAGT
GAAGCGGAACAAGTCGCACACACGAGACAGTGTCTTGTACAAATTGGAAATCAAATTAACACTTGTTTAGAAGAATATAG
AGATCCTGAACAAATTAAAGAATGGAGAAAAACTATTAAAGAAAATAGATTACAAAAACGTAGAATCGAAGATATAGAAG
AAAATTCGAATAGTAGTAATACACCAAATAAAAAACACCTCTCAACTATATCTGCTGTAAATAGTATCAGCAATACATCT
ACAGTTACTATTGGTGCTATTACTATTACCCCTATTACATCGACTCCAAATTCTACTTCAAGTACTACTAATAGTATAGA
TACACCACGACATAAAGAAAAAGAATCAAAACATAAAGATATGAAAAGAGATAGAGAACGTGATAGAGATAGAGATAGAA
CACATAGTGATAGAAATATGGATAGGATGAGTGGAGGTAAAGATGAAAGAATTAGAAGAGATAGTGGTGGTTATAATATG
AGTGGACATTATAGTGGAAGCAGAGATGATGACCATTGGTTATCTCGTGATGGAAGAGATATGCGAGATGGAAGATTTGG
AGACCATAAACGTGATCGTTTTGATTCTTATGGACGAATGTCTAGTGGATATCATCGGGATAGAGATCGAGATCGCGATC
GAAGTATGCATATGAATGACAAAAGAAGTGATTATTACAGATATCCATCAGGACCACCCAGTTATGGATATGGTCCAGGA
GGATATGGAGGTGGAGGCGGCGGTTACCCTCCATCTGATATTCCACCAAGTCATTTTAGAAGTCGAGGTTATCCTGGAGA
TAGTTATCCTAGTGATTGGCGACCAAACAAAGATTACAGACGAGATTATGATAGAAGACCACCTCCACCAAATGCTAATT
CC
PEP:
>GB52346-PA
MQKTLESESGKESASDSENESKSDSSSSGSNTGSGSGSESDSSSSSGSGSGSGSDSDKSEKSDAPAQSDSFQSKSSNHST
ETKVRLKNESSREWDENPDIYGIRRSGRSRKEPERLATQRESDSDSRKKFKKKSSHNSWNSDSSDSESDDVESRRPPPSK
SLNRRAAQKAKEKARIRKKRISESSENSSFDSDDNRRQVTRRTGTAISYKEESEERTDSEDLVEIDEGSTANTEPDNAET
IERILGQRIGKKGVTGNVTTIYAVEENGDPNPEDLSREETELQYLIKWKGWSHIHNTWESEESLKAQKVKGLKKLDNFIK
REREIKQWRDYAGPEDIDYFECQLELQQDLLKSYNNVERIIAEYNKPDSEHPDYYCKWESLPYAEATWEDGALIVKKWPE
KIKEFREREESKRTPSKHCKVLKSRPKFHQLKGQPDYMGKGRDLTLRDYQMDGLNWMIHSWCKENSVILADEMGLGKTIQ
TICFLYYLFHTHQLYGPFLLVVPLSTMTSWQREMSQWAPDMNFVTYLGDVTSRNVIREYEWCYSSKRLKFNAILTTYEIV
LKDKAFLGALNWAVLLVDEAHRLKNDDSLLYKALAEFHTNHRLLITGTPLQNSLKELWALLHFIMPTKFGSWEEFEKEHD
NAAQKGYSKLHKQLEPFILRRVKKDVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNYNALRKGVKGSTMTFLNIVIELK
KCCNHAFLTKPTENERKDNNEDYLQQLIRGSGKLVLLDKLLVRLRETGHRVLIFSQMVRMLDILGEYLQKKHFPFQRLDG
SIKGELRKQALDHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTKN
SVEEEIVERAKQKMVLDHLVIQRMDTTGRTVLDKKNAGTNNNPFNKEDLNAILKFGAEDLFKDEEDGDEEPTCDIDEILR
RAETRDEGPSTVGDELLSAFKVASFAAFEEESEPVNQPNDNDDESKDWAEIIPENFRKKVEEEEKSKEMEDLYLPPRSRK
TLQQINQSGEGRGRKRKKLSADDSEEGEDSGSEIEGSDDERPKKRGRPRVTPRENIKSFTDAEIRRFVKSYKKFPAPLKR
LDDIAADAELQEKPMSELRFLGDQLKTRCDTCLSEFESTAKENKGEEEGKGPGRKRGRGPTFKIGGVMVNAKSFSAAVKE
LEPLEQALPSDSEQRSNWHIDIKLKPANFDCDWNSEDDSRLLRGIYQHGMGSWEAIKMDNNLKLGDKLLPNGSKLQLKKI
NTRAEYLLKVLKKQIDSKLGVTKARKPRKPKEAKPAITKEIIEENDSSGEESNKSKSKIEKLPTKKEEEIVIKKETKEEV
EDIVEEKKKEKKTKKEKKENKKAKKAKQAAGPMHFTANNEPRALDVLGDLDPSIFNECKEKMRPVKKALKALDRPDQSLS
EAEQVAHTRQCLVQIGNQINTCLEEYRDPEQIKEWRKTIKENRLQKRRIEDIEENSNSSNTPNKKHLSTISAVNSISNTS
TVTIGAITITPITSTPNSTSSTTNSIDTPRHKEKESKHKDMKRDRERDRDRDRTHSDRNMDRMSGGKDERIRRDSGGYNM
SGHYSGSRDDDHWLSRDGRDMRDGRFGDHKRDRFDSYGRMSSGYHRDRDRDRDRSMHMNDKRSDYYRYPSGPPSYGYGPG
GYGGGGGGYPPSDIPPSHFRSRGYPGDSYPSDWRPNKDYRRDYDRRPPPPNANS
Swiss-ProtChromodomain-helicase-DNA-binding protein 1
KEGG     K11367     
SUPERFAMILYSSF54160  Chromo domain-like superfamily     
Gene3DG3DSA:2.40.50.40     
PfamPF00176  SNF2_N; SNF2 family N-terminal domain     
SMARTSM00298     
ProSiteProfilesPS50013  CHROMO_2; Chromo and chromo shadow domain profile.     
CoilsCoil
ProSitePatternsPS00690  DEAH_ATP_HELICASE; DEAH-box subfamily ATP-dependent helicases signature.     

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