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Gene detail [Fasta]

Species Atta cephalotes
GeneACEP24392
Positionscaffold00003:5208438..5220017[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/acep_10/?name=ACEP24392
sequence mRNA: 
>ACEP24392-RA
ATGGGCAATGTATATTACTCTCCTATAGATGTGATGGAACTGACGACTGTACAGATGGTTCGGATGAAGAAGATTGCGAC
GATTATAGCGACTAATAACTGCATACCGATAGCAAAGTTCTGCGACGTAATACAAGATTGTCCGGATGGAAGTGATGAGT
ACGACGATTGCGTGAAAGATTTAAATTGCAGTGGCAGATTCCAGTGTGCTGACGAACATTGCGTATTTCATGATTGGGTT
TGCGACAGTAACAAGGATTGTCCCGACGGCAGCGACGAATGGAATTGCAACGCAAATAAAACATCATCCGCGAGTTATTG
TAAAATAGAAAATTCCCAATATTTGTGTGAAAATCAACTATGCATACCTCTTAAATTAGTATGCAATGGAAAGGATGACT
GTGGCGATAAATCAGACGAAGCCGGTTGTACATCCAGTTGCTCGGTAAAATGTGATCATGAATGCAAACAAACTCCTAAA
GGAAGTATATGTTTCTGTAAACCGGGTTATAAATTACAAAATGATAACCGTACTTGTATAGATATCGACGAGTGTCAAAT
TTATGGTGTATGCGATCAAGAATGTATAAATACTCCAGGATCGTATAGTTGCAGGTGTCAAACGGATTATTTCTTGCAGC
AGGATAAAAAAACCTGCAAAGCGATTGCTGGCGAGGCTACGATAGTCTTCTCTGCAAAAACAGAAATTGTTGGCATGTAT
CTCGATTCGCAAATAAACTTTATAGTTGCGAAACACTTAAATCGTGTGATCGGTGTTGCTATGAACGGCGACCACACATA
TTGGTCGGATATTGAAGAAGATAGAGAGGTTATTGTAAGAAGTACTCCTCAAAATAAACACGAAGTCATTGTGATGATGG
GTTTGAAGGAAATATCGGCGATAGCTGTGGATTGGATCACACAAAATATATATTTCACGGATACCGGTTACAATCGTATC
GGAGTTTGCAAAGACGATGGCACATATTGCACCATATTAATCAATGATACTGATAAACCTACAGGACTTGCTTTATTACC
AACTCATGGGAAAATGTATTGGTGTGATTGGAGTTCTAATCCACATATAGCAGTTGCGGGAATGGACGGCAAAAACATCC
GTATATTCGTCTCTACAAACTTAAAAGCGCCACAAAGCCTAACTATTGACTATCCGACTAATCGATTATATTGGGCGGAT
ATCAAGTTAAAGAAAATCGAAACAATACGCTTAGACGGAACCGATCGAAGAGTTGTACTACACGATATAATAGAAGACCC
ATTCTCATTGGCGGTCTTTGAAAATAAATTGTACTGGAGCGACTGGGAATCCAAATCAGTAGAGTCCTGTAATAAATTTA
CTGGAAAGGATTGGAATATCTTACATCTTGGTCAACATTCACATTTCAGTGTGCACATCGATCACTCAGCAATAAAGCCC
AAAGTTGACAATCCATGTCATTTTAATCCGTGTTCTGAATTGTGCATGCTAAATCAAGAGAACGGATACACATGCGCTTG
TACTTTGGATAAAAAATTAAATGCCGATAATCATACTTGTCAAGAGGTGACGAAGAATTTGCTGATTCTTCATGATACGA
TATTTACAAACTATTATCATGGAATGTTGGGAAAACTGAAAACAAGAATAGCCTCGAAAGTATTACTTCCTCAGGATATA
GTATCTGATCCGACCTCTGGCCAAGTAATATGCTATATAATGACGGAACGATTTGAGAAAGCCATCGTACTCTTCGATCC
AGTCAGCGATACTTTTAAAAACACCATATTGCACAATGTTTCTTATTTTAGCATGGCATTTGATCATTTTGATTGTGAGG
ACGGATCGGATGAAAGACCTGAGGCATGTAAATCAAACGCATCATGTTTGAATGATAAATTCCAATGCAACGATGGTAAT
TGCATATCTCTTTCGCTGAAGTGTAATGGCATCGACGATTGCCTCGATGGCAGTGATGAAAGGCATTGCTTAGCGAAATC
AGTTTATTTGACTAATTGCACTGCGGATAAATATCGGTGTCTCGACACTTATTTGTGTCTTCCTAAAAAAGTAAAATGCG
ATGGCAAAAGTGATTGTCCTAAAAACGATGATGAGCACAATTGCGTGTTTTGCTTTGACAATGAATTTACTTGCGACAAT
GCGGAGTGCATTCCGGAGAATTGGGTATGCGATCAGTCTGACGATTGCGGTGATAATTCAGATGAAAAAAATTGCGACGG
TAGTAAAAAGACCATCATGGAATCTACCAAATGTGATGAATTCAAATGTTCTATCGGCACTTGCTTGCCGTACAGCAAAG
TATGCGATGGGAATCGAGATTGCCCAGATGGTAGCGACGAAAATGGGAAATGTCGTGAATTCGGTACTATTAAAAAACTC
AATATTAAAACAAAGAAAGTAACCACAATTATGATTGTCGAGCATCCACAGTCACTTGCGGTCGATTGGATTACTGATAA
CGTTTACGTCAATGATAATGGCTATTTGAATACGATTAAGGTATGCAATTTGGAGAAAGAAAAATGTGCGACGCTGATCG
AAATAGAAGAAAAGGCAAAAGTAGTGTCTATTGTTGTTGACTCAATTAATAGATGGCTATTCTGGACTCAAATAACGTGG
CAAATGGACGTGCCATTTAGCAAAATATGTCGAACGGACATGATGGGTGCCGACATGAAAATTATTGGTTCCGATATGTA
TTATCCGTTTGGTATCAGTATTTATGAACAATCACTTTATTGGTTGATGGATACAAGCGGTCAACTGCAAAGTTGTAAAC
TGTATGGTAAAAAATCATGCGAAACAATAAATATAGGCAAAAACAATGTTCACAAACAGTTTGCCATTCTTCATATTTCC
AGACAACCTGTTGTGATTTTTAATAGTTGCAGCAGCATTCACTTCCATAATCCGTCATACGATCGAAGCAACGAGGTTGA
GGTAACACTCAACTCAATAGTTGCAGGCTTATCTCCTGGACAGCATGAATACGTTAATCCTATCGATAATAAATTTCTAA
ATTTAAAGGATGCGATGGAAAATAGTGAAAACAGACAGAAGTCAGATCCATATTCGAAAGAAAGAGATATTGAAGAGATA
GAGAAGCAAGATTCGTTAATTTATTTTGTACAATCGAAATAA
PEP: 
>ACEP24392-PA
MGNVYYSPIDVMELTTVQMVRMKKIATIIATNNCIPIAKFCDVIQDCPDGSDEYDDCVKDLNCSGRFQCADEHCVFHDWV
CDSNKDCPDGSDEWNCNANKTSSASYCKIENSQYLCENQLCIPLKLVCNGKDDCGDKSDEAGCTSSCSVKCDHECKQTPK
GSICFCKPGYKLQNDNRTCIDIDECQIYGVCDQECINTPGSYSCRCQTDYFLQQDKKTCKAIAGEATIVFSAKTEIVGMY
LDSQINFIVAKHLNRVIGVAMNGDHTYWSDIEEDREVIVRSTPQNKHEVIVMMGLKEISAIAVDWITQNIYFTDTGYNRI
GVCKDDGTYCTILINDTDKPTGLALLPTHGKMYWCDWSSNPHIAVAGMDGKNIRIFVSTNLKAPQSLTIDYPTNRLYWAD
IKLKKIETIRLDGTDRRVVLHDIIEDPFSLAVFENKLYWSDWESKSVESCNKFTGKDWNILHLGQHSHFSVHIDHSAIKP
KVDNPCHFNPCSELCMLNQENGYTCACTLDKKLNADNHTCQEVTKNLLILHDTIFTNYYHGMLGKLKTRIASKVLLPQDI
VSDPTSGQVICYIMTERFEKAIVLFDPVSDTFKNTILHNVSYFSMAFDHFDCEDGSDERPEACKSNASCLNDKFQCNDGN
CISLSLKCNGIDDCLDGSDERHCLAKSVYLTNCTADKYRCLDTYLCLPKKVKCDGKSDCPKNDDEHNCVFCFDNEFTCDN
AECIPENWVCDQSDDCGDNSDEKNCDGSKKTIMESTKCDEFKCSIGTCLPYSKVCDGNRDCPDGSDENGKCREFGTIKKL
NIKTKKVTTIMIVEHPQSLAVDWITDNVYVNDNGYLNTIKVCNLEKEKCATLIEIEEKAKVVSIVVDSINRWLFWTQITW
QMDVPFSKICRTDMMGADMKIIGSDMYYPFGISIYEQSLYWLMDTSGQLQSCKLYGKKSCETINIGKNNVHKQFAILHIS
RQPVVIFNSCSSIHFHNPSYDRSNEVEVTLNSIVAGLSPGQHEYVNPIDNKFLNLKDAMENSENRQKSDPYSKERDIEEI
EKQDSLIYFVQSK
Swiss-ProtVitellogenin receptor
SUPERFAMILYSSF57424  LDL receptor-like module superfamily     
Gene3DG3DSA:2.120.10.30     
PfamPF12662  cEGF; Complement Clr-like EGF-like     
SMARTSM00179     
ProSiteProfilesPS50068  LDLRA_2; LDL-receptor class A (LDLRA) domain profile.     
PRINTSPR00261     
ProSitePatternsPS01209  LDLRA_1; LDL-receptor class A (LDLRA) domain signature.     

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