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Gene detail [Fasta]

Species Atta cephalotes
GeneACEP13008
Positionscaffold00043:1019850..1025478[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/acep_10/?name=ACEP13008
sequence mRNA: 
>ACEP13008-RA
ATGGTTTGCAAAGCTGGTGAAAAGACTCAAGTATGTGTCGTTCAGTTTAATATGCCTTACGAGGCTAACCATAAACTTTG
CACTAGCGACAAATTTTCCTTACATGTATCTACACGCGTGAAGGATCTTTACAACTATATCGAAGAACATTATCATATGC
AACCGGACAGTTTTAGGTTGCTTCTACGCACGCCGTCATGCACACTGATTGATTTATCTGAGTTGAAAGACAAAACGATG
GAGCAGGTTGGAGTAGATTTTTCGGTTGATTCGAGTTCACCTGAAACGAAAAATACTCTGTTTGTCGTTCATCCAACAGA
ACCCTTTGTTATTGATATGGCAACGTCCCGAAGAAAGATGGATTATCATCATTCGCCACCGTTTAATGTAACAGGTGCAC
CGTCCCTTCATCCACGATGGACTGAGGAAAATATTGTTAGGGAAGATGTTAGGGATGGTAGAGAAGAAGTTAATTTCAGA
ACTTTTATTAAAACTGAAACAAGCTATGTCGGTTTAGTTAATCAAGCAATGACTTGTTACTTGAATAGTCTTCTTCAAGC
TCTGTATATGACACCAGAATTTCGTAATGCACTTTATAATTGGGAATATATAGATAGTTCAGAAAAGGATGAAGCTCTAA
GCATACCGTATCAATTACAGAAGTTATTTCTCAATTTACAGACATCTACAAGGTCTGCAGTGGAGACTACATCCTTAACG
AAAAGTTTTGGATGGGATTCTACCGAAGCATGGCAACAACACGATATTCAAGAGCTTTGTAGAGTTATGTTCGATGCATT
AGAACAGAAATTCAAAAATACAGAACAAGCGGATCTAATTAATAGACTTTACGAAGGAAAGATGACCGATTACGTTAAAT
GTCTTGAGTGTGGAACAGAAAAATCAAGAGAAGATACGTTTCTTGATATCCCATTACCAGTTAGACCATTTGGAAGCAAT
GTTGCATATAACAGTGTGGAAGAAGCAATTAGAGCATTTGTTCAGTATGAAACATTGGAAGGAGCTAATCAGTATCATTG
TGAAAAATGCAATAAAAAATGTGATGCGCATAAAGGATTGAAATTTACGAAATTTCCATATCTATTAACTTTACATCTCA
AGCGATTTGATTTTGATTATAAAACCTTCCACAGAATCAAGCTCAACGATAAAGTCACGTTTCCATACGTATTAAATTTG
AACTCTTTTATTTCATCCACAACGAGTCAAGAATCTCCTGGTGGTGAAGAAGATATTGGTTTAGGTATCAAATGTGATGA
TAGTTCCACGACAGACAGTGGTACATTAGATGATGATTGTGCACCGTGTGACAACAGCCTTTCCAATAGTAATCATTCAG
CCAGTCATGATCAAGACGACGATGAAGGTATTGATATGAGCAATGGACCATCAACGTCGAGCTGTATTACTCATAATCAT
GAGAATGAAAAGAATCGCAGTGCTTATATGTTGGGAAAAGGCCCATACACGTATGAATTGTTTTCAATCATGATTCATAG
TGGCAGTGCGAGCGGAGGTCATTATTACGCTTATATAAAAGATTTCAGGACGCAAGAATGGTTATGTTTTAATGACCAAA
GCGTAACTCAGATAACTGATGATGATATTCATAAAACATATGGCGGTGGACCTTCGAGGGCGTATTATAGCGGTGCATAT
AGCAGTAGCACGAATGCGTATATGCTTATGTATAGGCAAATCGATCGTGCTCGTAATGCTTTACCTATGCAAACTGAAGA
TTTTCCGCAACACATTCAGGAGCTATTAAAGAAAATGAAAGAAAGTGAAGATAACGATAGAAAAAATCGTGAGAAAATGT
CTATACCTAGATTGAAAGTATACTGTCATCATCCAGTAGAAGGGAAATTGATGAATGTCAAATTATTTGTTATGCCTGAT
ATCACTTGGACCGAAGCAACAGAAAAAGCATATAAGAAATTTGGTCTTGAAAATGTAGTGAGTTTGGATCAGTGTCGTTT
AGTTAGTTATGAACATAATACTGATTTAATAGAATGTAGTTACGATGATCGAGAGCATGAATCTGTTGGAAATATATGGC
GTTTTTCACGTCGATTCGATTTATTATTAGAAATTCGTCGCAAAGATCAAAAGTTTGAGACGTATTTACCGGGTGGAGTT
GCAACTAAAGTATTTGTCATAGACGTAACCCGAGAGGAGGTAATTGACGGTCCAATCGATATCCGAGGTTTATTGTCGCA
AAGTGTTAAAGAATATAAACAAACCGTAGGAAAAATTATTAGTATGGATCCTAAGCAAATGAAAGTAATATTGCGAAAAT
TCCCGGAAATTAGACCAGTGGAAAATGATGATAGTGATCTTCAAACTGAAGGATTTTATAACGCGAATAAAGTATTCATA
TCAACAATGTATGATATAGATAATGGTAAACCTTTTCAAGAATCTACAGTACACAGAATTATAGAAAATTTTAGACATGT
TATCTCTCTGCATATTCAGTTACCAGATACAAGTAAAGAAACTTTGGAAGAACTAAATATCCCATTGTTAGATGATAAAT
ACGAAGAAAAGGAAAAGTCTGTTACTAGTGGTCCACTTAAACTCTTTAATGAATCCGATTGGGATGTTAATTTGAAATGC
AATGAAACTTTAAAAGGTGCACGAACTAATGAGGATGCTACTATACGAAATATAAGTCCTCAGTTAGGGGAAGCTGAGGA
ATGGAATACTCCTGAACAAAGTAATAGTGAAGATAGCAGCCTTAGTGATAGTGATAAAACGTTGGTTGGTGATGTACCAG
AGGGTGTCGATATTGCACCGCTATCCCATGATTGCGGTTCAATATCGTGGGATAGCCGTGCAATATCGAATCGTTATGAT
TGCAACATAGGCGTAAGGCGCAACTATAAGATTTCAAAGCGATTCGAAATAGAAAACTGGGATATTGATGATGACTCCGA
TTATTACTTTAGAGCTACACAATATACAGATAGTACTCAACAAAACCTACTTAAAGTATTAGTGGATAAAAGAATGAGAT
TGAGCACGTTGAAGAAAGATTTAGAACCATTTGTGGGTGTACCTGTGGAGTATTTTAAAATTTTTCGTCTATCGAATTCT
GGTGAATCAGAATGCAATTGTTTGATGGAACAACTTAGTTCGTACGAGGATGGTGAGAGACTTAATGTGAAACTTGGCCG
AGCTTTGCGTAATGGAGAATTTAAAGTAAAATTATATCAACTATTAATCGACTCCACTGAGCCTTACAAATTTTTATGTG
AATGGATTGTCTCGAGAGATATGACGGTTGGACATGCAAAAAAAGAGATATTGGCAGAAATAAAGAGAAAATATGATATA
GATATACCATATGAAAAATGCCGACTTAGGAAAAAGTATTATAAAACAGCCTCAAAAGTATTTCTAAACGAACAGAAGTT
TGAGGATCTCCAATTTCATTCGCAGTTTGAAATGATTGTTCAAGAACTATCAGATAAAGAGATAGTCACAGACACCAATC
AGATTGTCCTGTTTGTCAGAAGGTGGTTACCAGCAAAATTGCAATTGGGACAATTCCAAGAAATTGTTATGGATAATAGA
ACTGTTGAAGAACTAAAAAAGAAACTTTCTTCAATATCAGATATTCCGGAGGAGCACATAGATATAGCAAAGGGGAAAGG
TAGTTTTCCGTGTGACAATTCTGTGCTTCGAATCCAAAACGAGCATGATTGGAATGAACATCACGATAGCTTATTTTTTT
ACAATTTTGAAGATGGTGCTGTCTTCTTGTACAGGGACAATAGAGAAAAACCAAAACAATTAAATGCTGACGAGGTAATG
GAGATCGCTTTTAAGGAAAATTCACGCTTAACGCCGCTTTCTACTACTTCGAGTTATAGTCCACGTCGAGAGAGAGCACT
TAAAATATATTTGGATACTGAATGA
PEP: 
>ACEP13008-PA
MVCKAGEKTQVCVVQFNMPYEANHKLCTSDKFSLHVSTRVKDLYNYIEEHYHMQPDSFRLLLRTPSCTLIDLSELKDKTM
EQVGVDFSVDSSSPETKNTLFVVHPTEPFVIDMATSRRKMDYHHSPPFNVTGAPSLHPRWTEENIVREDVRDGREEVNFR
TFIKTETSYVGLVNQAMTCYLNSLLQALYMTPEFRNALYNWEYIDSSEKDEALSIPYQLQKLFLNLQTSTRSAVETTSLT
KSFGWDSTEAWQQHDIQELCRVMFDALEQKFKNTEQADLINRLYEGKMTDYVKCLECGTEKSREDTFLDIPLPVRPFGSN
VAYNSVEEAIRAFVQYETLEGANQYHCEKCNKKCDAHKGLKFTKFPYLLTLHLKRFDFDYKTFHRIKLNDKVTFPYVLNL
NSFISSTTSQESPGGEEDIGLGIKCDDSSTTDSGTLDDDCAPCDNSLSNSNHSASHDQDDDEGIDMSNGPSTSSCITHNH
ENEKNRSAYMLGKGPYTYELFSIMIHSGSASGGHYYAYIKDFRTQEWLCFNDQSVTQITDDDIHKTYGGGPSRAYYSGAY
SSSTNAYMLMYRQIDRARNALPMQTEDFPQHIQELLKKMKESEDNDRKNREKMSIPRLKVYCHHPVEGKLMNVKLFVMPD
ITWTEATEKAYKKFGLENVVSLDQCRLVSYEHNTDLIECSYDDREHESVGNIWRFSRRFDLLLEIRRKDQKFETYLPGGV
ATKVFVIDVTREEVIDGPIDIRGLLSQSVKEYKQTVGKIISMDPKQMKVILRKFPEIRPVENDDSDLQTEGFYNANKVFI
STMYDIDNGKPFQESTVHRIIENFRHVISLHIQLPDTSKETLEELNIPLLDDKYEEKEKSVTSGPLKLFNESDWDVNLKC
NETLKGARTNEDATIRNISPQLGEAEEWNTPEQSNSEDSSLSDSDKTLVGDVPEGVDIAPLSHDCGSISWDSRAISNRYD
CNIGVRRNYKISKRFEIENWDIDDDSDYYFRATQYTDSTQQNLLKVLVDKRMRLSTLKKDLEPFVGVPVEYFKIFRLSNS
GESECNCLMEQLSSYEDGERLNVKLGRALRNGEFKVKLYQLLIDSTEPYKFLCEWIVSRDMTVGHAKKEILAEIKRKYDI
DIPYEKCRLRKKYYKTASKVFLNEQKFEDLQFHSQFEMIVQELSDKEIVTDTNQIVLFVRRWLPAKLQLGQFQEIVMDNR
TVEELKKKLSSISDIPEEHIDIAKGKGSFPCDNSVLRIQNEHDWNEHHDSLFFYNFEDGAVFLYRDNREKPKQLNADEVM
EIAFKENSRLTPLSTTSSYSPRRERALKIYLDTE
Swiss-ProtUbiquitin carboxyl-terminal hydrolase 47
KEGG     K11857     
SUPERFAMILYSSF54001  Cysteine proteinases superfamily     
Gene3DG3DSA:2.20.210.10     
PfamPF00443  UCH; Ubiquitin carboxyl-terminal hydrolase     
ProSiteProfilesPS50235  USP_3; Ubiquitin specific protease (USP) domain profile.     
CoilsCoil
ProSitePatternsPS00972  USP_1; Ubiquitin specific protease (USP) domain signature 1.     

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