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Gene detail [Fasta]

Species Camponotus floridanus
GeneCFLO18872
Positionscaffold1734:8128..20224[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/cflo_33/?name=CFLO18872
sequence mRNA:
>CFLO18872-RA
ATGGCAGACGACAGTCACAAAATGAAGGACGGACTCCATGTTAACTTACAGAAAACATTAGAATCTGAATCCGGTAAGGA
ATCCGGATCCGATTCGGAGAATGACAGCAAAAGCGATAGCTCCTCTTCTGGAAGTAATAGCGGTTCAGCATCAGGATCTG
ATAGTGACTCTAGCTCCTCGAGCGGTTCCGGTTCCGGATCAGGCTCTGACTCAGAAAAGTCAGAGAAGTCAGATGCACCT
GCTGCACAAAGCGATAGCTTCCAGAGCAAAAGCTCGAATCACAGCACAGAAACAAAGCTTAGAGTTAAACATGAGTCTAG
CCGTGAATGGGACGAGAATCCTGACATATATGGCATCAGGAGATCGGGACGTTCCAGGAAGGAACCTGACAGGCTCGCGA
CAAATCGCGAGAGCGACAGCGATGGTCGCAAGAAGTTTAAAAAGAAAGGTTCACACAATTCCTGGAATTCTGAAAGTTCA
GATTCCGAATCTGACGAAATTGAAAATCGAAGGCCGCCTCCTAGCAAGTCTTTAAACAGACGCGCGGCGCAAAAAGCAAA
AGAGAAAGCCAAAGTGCGAAAGAAGCGAATTTCTGAATCTTCTGAAAATTCTTCCTTTGATAGTGATGACAATAGAAGGC
AAGTCACTAGACGGACTGGCACAGCAGTTAGCTATAAAGAAGAAAGTGAAGAAGGAACTGATAGTGAAGATTTGGTTGAA
GTTGAAGAATCGAATGCTGCATCAGCAGAACCTGATAATGCGGAAACTATTGAACAAATTTTGGGACAGAGAATGGGCAA
GAAAGGAGTTACCGGCAACGTGACAACAATTTATGCTGTCGAAGAAAATGGCGATCCCAATCCAAAGGATCTAAGTAATG
TAGAGACCGAAGTACAATATTGGATAAAATGGAAAGGTTGGTCTCACATACACAATACATGGGAATCAGAGGAATCTTTG
AAAACACAAAAGGTGAAAGGATTAAAAAAGTTAGACAATTTTATCAAACGTGAACGTAGACTGGAACAGATGAGAGAATG
TATTGAATCAGAAGATTTGGAATATCTTGAATGTCAATTGGAACTTAAAAATCAACTTTTGAAAAGTTACAACAACGTTG
AGAGAATTATAGCTGATTATAAGAAACCAGACTCGGAACATCCTGATTATTTCTGTAAATGGGAGAATCTACCATATGCT
GAGGCTACATGGGAAGATGGAGCTTTGATAGTGAAGAAATGGCCAGAAAAGATAAAAGAATTTCGCGACAGGGAGGATTC
TAAAAGAACACCAAGCAAACATTGTAAAGTTCTTAAATCTAGACCTAAATTTTATCAATTGAACGAACAGCCTACTTATA
TGGGCAAAGAAAAGGATTTAGTATTGAGGGATTATCAAATGGATGGAGTTAATTGGATGATTCACTCTTGGTGTAAGGAA
AACAGTGTTATATTAGCTGACGAGATGGGTCTCGGCAAAACAATCCAAACAATATGCTTCCTTTATTATCTTTTTCACAC
GCAACAACTTCATGGACCGTTTTTATTAGTAGTTCCTCTGTCAACAATGACTTCCTGGCAAAGAGAAATGGCTCTATGGG
CACCTGATATGAATTTCGTCATTTATTTGGGTGATGTCAATTCGCGCAATGTTATTAGAGAATATGAATGGTGCTATCGA
GGATCGAAGAGATTAAAATTCAATGTCATACTTACAACGTACGAAATAGTACTTAAAGATAAAGCACTGTTGGGTGCCTT
AAATTGGGCAGTACTGCTAGTGGATGAAGCTCATCGATTAAAAAACGACGATTCTCTTCTGTACAAAGCACTTAGCGAAT
TTCACACCAATCATCGTTTGTTGATCACTGGTACTCCATTACAGAACAGCTTGAAAGAATTGTGGGCTTTATTACACTTC
ATTATGCCTACCAAATTCGTCTCATGGGAAGAATTTGAGAAACAACATGATAATGCTGCACAAAAAGGATACTCCAAACT
ACATAAGCAATTGGAGCCATTTATTTTGCGCAGAGTTAAAAAGGACGTTGAAAAATCTTTACCCGCTAAAATTGAGCAAA
TTTTACGGGTAGAAATGACTTCCCTGCAAAAACAATATTATAAATGGATATTGACTAAAAATTACGATGCATTAAGAAAA
GGCATGAAAGGATCCAGTTCGACATTTTTGAACATCGTGATCGAATTAAAAAAATGTTGCAATCATGCTTTTCTTACAAA
ACCGAACGAGGCCGAAAGGGAAAAAGGCAATGGGGATTATTTGCAGACACTCATCCGTGGTTCCGGAAAATTAGTACTTT
TAGATAAATTATTAGTGAGATTGCGTGATACTGGACACAGAGTACTAATATTCAGTCAGATGGTCAAAATGTTAGACATT
CTCAGTGAATATCTGCAAAAAAGACATTTCCCATTCCAAAGATTAGATGGCAGTATAAAAGGGGAACTGAGGAAACAGGC
ATTAGATCACTTCAATGCTGAAGGATCACAGGATTTTTGTTTCCTATTGTCAACGCGAGCCGGCGGTCTCGGCATTAATC
TTGCCACTGCGGATACTGTGATAATTTTCGATTCCGATTGGAATCCGCAAAATGATTTGCAAGCTCAGGCCAGAGCACAC
CGAATAGGACAAAAGAATAAGGTCAATATTTATCGACTGGTTACCAAAAATTCTGTCGAGGAAGAAATCGTAGAACGTGC
AAAGCAGAAAATGGTCTTGGACCATTTAGTGATACAGCGAATGGATACAACCGGACGGACGGTATTGGATAAGAAGAATG
CAGGGACCAATAGCAATCCATTTACCAAAGAAGATTTAACTGTTATTTTGAAATTCGGCGCAGAGGATCTGTTTAAAGAT
GAAGAAGATGGAGATGAAGAACCAATGTGTGATATCGATGAAATATTAAGAAGAGCTGAAACAAGAGATGAAGGTCCGAC
GACAGTTGGCGATGAATTATTGTCCGCTTTTAAAGTAGCTAGTTTTAAACCTACTTTTGAAGAAGATTTGGAACCTATTA
ATCAGCCGAATGATAACGATGATGAAAGTAAAGACTGGGCTGAAATCATTCCGGAAAACTTTCGAAAGAAAGTAGAAGAA
GAAGAGAAGTCGAAGGAAATGGAAGATCTTTATTTGCCACCGAGAAGTCGGAAAACACTTCAGCAAATCAATCAGAGCGA
AGGAAGAAGCAGAAAGCGTAAAAAGGTACAGGATGATAGCGAAGAAGGGGAGGAGTCGGGTAGCGAGGTGGAGGGTAGTG
ACGATGAAAGACCTAAGAAAAGAGGTAGACCGAGAGTCTTGCCGCGCGAGAACATCAAGAGTTTCACAGATGTTGAGATA
CGAAGATTCGTTAAAAGTTATAAAAAGTTCCCGGCACCCTTGAAACGATTGGAAGATATCGCAGCTGATGCTGATTTACA
AGAGAAACCAATGTCGGAATTGCGCTTCTTGGGCGAACAATTGAAATCTAGATGCGACATGTGCTTAGTCGAATTTGAGA
ACACGGCGAAAGAGAATAAAACTGGCGAGGAAGAGGGCAAGGGACCTGGTCGTAAGAGAGGACGAGGACCTACTTTCAAG
ATGGGCGGTGTTATGGTGAACGCGAAATCATTTTCAGCCGCAGTTAAAGAACTTGAACCTTTGGAGCAAGCTTTGCCATC
CGATCCCGAGCAACGCGCCAATTGGCACCTCGACATTAAATCAAAGCCAGCAAACTTTGATTGTGAGTGGACTTCCGAGG
ATGATTCGAGATTATTAAGAGGTATATATCAACATGGCATGGGTTCGTGGGAAGCAATAAAAATGGACGCTAGTTTGGAA
TTGGGAGATAAGATTTTTCCTAATGGCAGTAAAGTACAACTCAAACGTGTGAACGCACGTGCGGAATATCTTCTGAAGAT
TTTGAAGAAACAGATTGATCTTAAGTTAGGAGTGGATTATGTCCTTCTCCTACAATTAGAAACCGAATATAAGGCACGAA
TGAGAAAACCAAGGAAGACTAAGGAAATGAAAACAGCAATCACTAAAGAGATTGTAGAAGATAATGATACTTCTGGTGAC
GAAACTAAGAAATCAAAATCTAAAAATGATAAATCTGGAATTAAGAAAGAAGAAGATATTGTTGCAAAGAAAGAAGTAAA
GGATGAAATTGATGATTTATCTGATGATAAAAAAAAGGATAAGAAGATTAAAAAAGAAAAGAAAGAGAACAAGAAAGCGA
AGAAAAATAAGCAAGCCGCAGGTCCTATGCATTTTACTGCAAATAACGAACCAAGAGCTGTTGATGTAATTGGTGAATTG
GATCCTCCAATATTTGATGAGTGTAAGGAAAAAATGAGGCCAGTGAAGAAAGCATTAAAGGCTCTGGATACACCAGATAT
GTCTCTGAGCGAGGAGGAGCGAGTCGCTCGTGCGCGTCGATGCCTTTATCAAATCGGAAACCATATCAATACATGTCTTA
CGGAATATAAAAATCCTGAACAAATAAGTGAATGGAAAAGTAACCTCTGGTACTTTGCTTCAAAGTTCACAAATTTCAAA
GCAAAGAAGCTTTATAGAATGTATAAGAATTTGGTAAAACAAGGTGGCGATAGCAATGGCGGTACTACATTGAGTCCTGA
CAAAAAAGAAGATGCTTCCAATACTACAAAGAAACATAATGAAAGATCGTCTCACGATAAACAGACGGAAAGTAGCAGCA
GTAACAAAGACAGCAGAATAACGAAACGTAAAATTGACGATACTGAGGAGAATTCAAATAGTAGTACACAAAGTAAGAAA
CAGAATATTTCTAGTGTCAGCAGCAATATCAGCAGCACGTCCACCGTTACTATCGGTGCTATTACGATTACTCCTATAAC
ATCAACGCCAAATTCCACATCAAGTACTACTAACAGCGCAGAAACATCACGACATAAAGAGCAAAAAGAATCGAAGCATA
AAGATATGAAAAGAGATAGGGAGCGTGACAGAGATCGAGATAGAGGACACAATGATAGGGGTATGGATAGGATAAGCGGA
GGAAAGGACGACAGGATCAGAAGAGACAGTGGAGGATATAATATGGGGCATTATAGTGGCAGCAGAGAGGACGATCATTG
GTTACCCAGAGATGGAAGAGACATGAGAGACGGCAGGTACGGATTCGGAGATCACAAACGCGATCGCTTCGATATTTATG
GCCGAATGTCAGGCGGTTATCACAGAGATAGAGATAGAGATCGAGATCGTGGTATGCACATGAATGACAAGAGAAGTGAT
TATTACCGATATTCGTCGGGACCGCCAAGTTATGGATACAATCCGGGTAATTATGGCGATAGTAGCGGTGGTGGCGGTTA
TCCTCCAACGGATATCGCACCGGGTCATTTTAGAGGTCGCGGATATGGAGGAGATAGCTATTCTAATTGGCGGCCGAACA
AGGATTATAGGCGAGACTATGATAGAAGGCCACCACCACCAAATGCCAACTCCTAG
PEP:
>CFLO18872-PA
MADDSHKMKDGLHVNLQKTLESESGKESGSDSENDSKSDSSSSGSNSGSASGSDSDSSSSSGSGSGSGSDSEKSEKSDAP
AAQSDSFQSKSSNHSTETKLRVKHESSREWDENPDIYGIRRSGRSRKEPDRLATNRESDSDGRKKFKKKGSHNSWNSESS
DSESDEIENRRPPPSKSLNRRAAQKAKEKAKVRKKRISESSENSSFDSDDNRRQVTRRTGTAVSYKEESEEGTDSEDLVE
VEESNAASAEPDNAETIEQILGQRMGKKGVTGNVTTIYAVEENGDPNPKDLSNVETEVQYWIKWKGWSHIHNTWESEESL
KTQKVKGLKKLDNFIKRERRLEQMRECIESEDLEYLECQLELKNQLLKSYNNVERIIADYKKPDSEHPDYFCKWENLPYA
EATWEDGALIVKKWPEKIKEFRDREDSKRTPSKHCKVLKSRPKFYQLNEQPTYMGKEKDLVLRDYQMDGVNWMIHSWCKE
NSVILADEMGLGKTIQTICFLYYLFHTQQLHGPFLLVVPLSTMTSWQREMALWAPDMNFVIYLGDVNSRNVIREYEWCYR
GSKRLKFNVILTTYEIVLKDKALLGALNWAVLLVDEAHRLKNDDSLLYKALSEFHTNHRLLITGTPLQNSLKELWALLHF
IMPTKFVSWEEFEKQHDNAAQKGYSKLHKQLEPFILRRVKKDVEKSLPAKIEQILRVEMTSLQKQYYKWILTKNYDALRK
GMKGSSSTFLNIVIELKKCCNHAFLTKPNEAEREKGNGDYLQTLIRGSGKLVLLDKLLVRLRDTGHRVLIFSQMVKMLDI
LSEYLQKRHFPFQRLDGSIKGELRKQALDHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAH
RIGQKNKVNIYRLVTKNSVEEEIVERAKQKMVLDHLVIQRMDTTGRTVLDKKNAGTNSNPFTKEDLTVILKFGAEDLFKD
EEDGDEEPMCDIDEILRRAETRDEGPTTVGDELLSAFKVASFKPTFEEDLEPINQPNDNDDESKDWAEIIPENFRKKVEE
EEKSKEMEDLYLPPRSRKTLQQINQSEGRSRKRKKVQDDSEEGEESGSEVEGSDDERPKKRGRPRVLPRENIKSFTDVEI
RRFVKSYKKFPAPLKRLEDIAADADLQEKPMSELRFLGEQLKSRCDMCLVEFENTAKENKTGEEEGKGPGRKRGRGPTFK
MGGVMVNAKSFSAAVKELEPLEQALPSDPEQRANWHLDIKSKPANFDCEWTSEDDSRLLRGIYQHGMGSWEAIKMDASLE
LGDKIFPNGSKVQLKRVNARAEYLLKILKKQIDLKLGVDYVLLLQLETEYKARMRKPRKTKEMKTAITKEIVEDNDTSGD
ETKKSKSKNDKSGIKKEEDIVAKKEVKDEIDDLSDDKKKDKKIKKEKKENKKAKKNKQAAGPMHFTANNEPRAVDVIGEL
DPPIFDECKEKMRPVKKALKALDTPDMSLSEEERVARARRCLYQIGNHINTCLTEYKNPEQISEWKSNLWYFASKFTNFK
AKKLYRMYKNLVKQGGDSNGGTTLSPDKKEDASNTTKKHNERSSHDKQTESSSSNKDSRITKRKIDDTEENSNSSTQSKK
QNISSVSSNISSTSTVTIGAITITPITSTPNSTSSTTNSAETSRHKEQKESKHKDMKRDRERDRDRDRGHNDRGMDRISG
GKDDRIRRDSGGYNMGHYSGSREDDHWLPRDGRDMRDGRYGFGDHKRDRFDIYGRMSGGYHRDRDRDRDRGMHMNDKRSD
YYRYSSGPPSYGYNPGNYGDSSGGGGYPPTDIAPGHFRGRGYGGDSYSNWRPNKDYRRDYDRRPPPPNANS
Swiss-ProtChromodomain-helicase-DNA-binding protein 1
KEGG     K11367     
SUPERFAMILYSSF52540  P-loop containing nucleoside triphosphate hydrolases superfamily     
Gene3DG3DSA:2.40.50.40     
PfamPF00176  SNF2_N; SNF2 family N-terminal domain     
SMARTSM00487     
ProSiteProfilesPS50013  CHROMO_2; Chromo and chromo shadow domain profile.     
CoilsCoil
ProSitePatternsPS00690  DEAH_ATP_HELICASE; DEAH-box subfamily ATP-dependent helicases signature.     

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