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Gene detail [Fasta]

Species Camponotus floridanus
GeneCFLO18740
Positionscaffold380:206951..228001[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/cflo_33/?name=CFLO18740
sequence mRNA:
>CFLO18740-RA
ATGGTGCAGTGTAGGGACACGGCCGATCGATACGGAGGCGAAAGGACGATGCCCGATTTCGATTTCCCTCCGAGAAGCAA
CTGCGGGGTCGCCCTAAGGGTGCAACACGTGCAATTATACAGGGTTGCAGATTTTCAGAAGCGAAGCGCGGGGGTGCAAA
ACGTACGCACGCAGACTGGTATCACAAGATCGATAGTAGACGTGAGGGAGCCGATATTATTAAAAGTTCTCGTTCCTCCG
ACCCACACAGCCTTGTCCGGCGATGTGACAGTTTTTATCCTAGATTCGGCGGAAACGGAATCTTTCGCAATATCCACCAA
TACCGTGATCACCAACGATACAAATGGTATGAAGAAAGATGAGGAAGATAAAATCGATCCGGAGAAAAACGAAATTAATG
GAAGTCACGAACCGCTCGTGCTTAGAGTACTATATGTCGATGGTCTCACATCGGAATTGATTGGTGATATCCCTCTCAAT
ACCTTACCGCATAAAGGTGAGAATATTTCTGTGATAATACCTTGTGGTATCTTCTCGCGCGGCGGAATTTATACATTACG
ACTTCAGTACAAGTTCTCAACCGTGGCTGCCAGATACAACACTGCCATTACTGGGCTGCCCGAAATTGAGATGAGCAGTG
CCTTAGACGTAAAGTGGCCAATCCCTTCTCTGCTCCTGGAATCCCAACACTTTGGTACATATCCTAGTCAACCGGTAATA
GCAACCATAAAGTACAATGGAATCTCATGTGTGCCTGATAACGGCATTCCCGTAGCGGCTTATAGTTTGCAGCTCATATA
TTGCGGTACTACCACCGCCGCCTGCGATCCACAGAACAATAGTCGCACTCAAGTACTCTATTACGAGGAGATAAACGGCT
TCACCTCGCCAAAGGTCATCGAACTAAAGTGCGATTTTTTCGGATTGGCTGGAAATTATGCACTTAGATTAAAGGCCTCG
GACATTAACCCTTCCGCACCGACGACTAGCGCGTACATCAAGGTGGAATGGTCGGACGAGTTCAGCTTCAACGTTCACGC
GAGATCGATTTATCCCTGCGAGGGATCGGCGGGCATATCGGTCCTCTTCCAGTATCCAGCGTGTCGTCTTCAGGGCGATC
GCATTCGTGTCTACGGTCGCCTCCGGGCGGACGTAAGTTCCTTGGCACCGCCGTCCGCGTTACATTACATCGCGGAATTA
AAGGCGGCACCGGGAAAGCACTCGTTGAACTTCGACTGCGATATCTTCACCGAGAAGTTCATCGAGTACTGCTTCGTTTA
TGTGAGCCAGGCGATCACCGGCGCGATGGCGGAAGTAAAGCTCGCGTGCATACCCACCTTCCCGCTCCTAGAAAATGACG
CGGCTGGTTGGGGTCCTTGGAGCGCGTGGAGTCCTTGCAGCAGCTCCTGCGTAGGTGGAACGCGTAATCGATATCGATTT
TGCGATACACCACCCCCGAAATACGGAGCAAAATTTTGTCAGGGAAAAGCGGTCGAGACAGAATCGTGCGGCGGCACCGG
CAGAATCGATTTTCAGGAGGCGTGGAACACCGAGGGATGGGAGTGTCGACACGGAACGACATTAGCGGCCACGAGACCGG
AAGTCACGGCTCAGATCGGTCTTCAGTGTCGATGCGGTTGTATTATAAATTTCCACGATCAAATCTTGAACAAGATTCTA
GCCGCGAATACACAAGCCTGTCCCGGTCGATCCTTTTGGCTGCTGCAGGCGAAATCGGATTACGTGATCCGACTGCACTT
GGACCAAACGCAGTTTCCCTGTCCAGGGCAATACTTCCGCATCCGCGACGGTGATTCGCGAAGTGCGGAACTTTTGACGG
ATATTGCGTTTGACAAAAGCGCACCCGCAACGGGAACGATATTTTCCTCGGGTCAAAATTTACTGTTGGAGTTTTTCAGC
GACGAGTCAACCGCTTCGGGAGACTCTTGCGTGGGTGGCTTTCTAGGACATGCGAGCATGTTTAAGAAATTATACGAAAA
GAATAAGACATTACTCTCTTCGGAAACGAGTTCCACTTCCACTGTCGAACGATGGATTTTCTGGGGACCCGCGCATTTGG
CGACAGCATCTCTTTTGATACTCATATTCTTTATATCTATTTTTCTAGCATTGCAATTTGCATTGAAATATAGAAAATAT
CATATCGCAGAAGATTTGGATACTCTGAGCGAGCATTCCGGATGTAGCGATACGATGGAACGAGCAAAATCAATGTCTTC
TACGACATTAATATCAGAAGTCGTGTCTTTAGTGGGATTGCCAAGAAAATGTACACCAAGACTTTCAAAACGTAAATTGG
CTCCTTGTGCGGTAGAGGACGGCTATGATAGTTCAGAAACTTTGGCAGAATATGAGGATGAAACTAGTTTGAGCTCTACT
ACTTTGAAACAAGATAACGAAGAAAGCTCTATAGAAAGAAGCATAATACCGAACAAACTACATGTTAATGAAACATCATC
GATAGTATCGGCTATTATGGCAGTTGGTCAGCCGGAAGTAAAATATGCCCAACCAGTCAAGTTACGCACCCTAGGATCTA
ACACCCCGGCAGTGGACAAGCTGATATCGGATGACACAACATGTCAAAGTACAGCGAGCATTACTAACAGCCCTCACATT
GCAAGACCTCATCATTATGCGTCCAATCCTTTGCAATCAAAGGATTCGACGAGCAGTCCACTATCGGGTGTTTCTACGTT
ACGCAGCGGTAAAGAGACAAAGGATCGTCGAAATCGCGAGCGACTGCTTCAAGGACCGGGCTCGGAGTTCAGCCTAACTA
ATCCGGAGACGGATATGGAACTGGATTATTACGATTACAACGTAGCGAACGCCGGCGCCGCGCCGGGTTCGTATTTAGGT
ATGGATCCAGCTTTTCTCCTATGGATTCCCCCGTTATCGATGTCTGAGGATTCTGAAGGTCCATCTGCGGATCGACCGGA
TTGTTTTCAAGGCACGACGGCGAGTCCGACATTATTCCGACTGCCGGAGGAGATCACCGAGGGCGCGACCCTGACCCCGG
CCGAGTATCGGCGAATGCGACAAAGGCTCGCGTCTAATGTCGAGGAGACCAGACTGAGCAACTTCGAGCAGAAACGCCAA
GACTCGACGTCCTCGTCTTCATCATCAAAGAACGATTCGTCATCTGGCGGTAGTGCTCTGTCCGAGGATAGCATCAACAG
CGAAGGCAGAGCGGCCAGGCTGAACGAACGCCTATTGCCAATCCACCGAATCCTGGAGGACTCTAGGACTCGAGTGAGCG
AAGAATCCTTGTGCGGTCAGCTTGGGACCGACAGGACGCAATGCATCATTCCCAATCGTCTTCAAGCTACTAAATTTGAT
TTTTCCCAGGAACAGGATACTTCATCGAGAAGTAGCCAACAAGGTAGTTATGTAAATATCACCGACAACGTGACAAAATC
GGAAGATAAAGCAGAGAAATCAAAACAGACTTCGAAAAGGTATACCGAGGACGCAATGCTCCATAATGCTACTTCGAAGT
CATTTTTTAATCAAAAAACAAAGGATGTTTCCCAAGAAGATAAGAGGAATCGTTATTTCAAGAACGAGAACACGTCCAGT
AAGAACACGTCTGGTAAATCAAGTTCGAAGACACAAGGATACGTAGATGGCAGAGAAAAGGATCTTCAGGATGCCAAAGA
CGATTCCAAATCGGATATCCTTTTGACGAATCTGAACGTAACGAGTAACCAATGCAAATATCGAGATTTTATGCAGTTCA
CGCAACCTCGAGAGATGAATAAATTGTCAGATTGCACCAACATTCCGATGATTGAGTTCTCGGGGCCGCGTTTAAACTCG
CCGGCGACAGCTCGAAGACTGACGACGGACAATTTCAACATTAGTTTGTCCAAGAAAGAAATCCAGAGTCCAGATTATGG
AGTCGAGAGCGATATTAAGGTGGAATCGCACGATTCCTTCTATGATCTAATCCGGGAGAACGAGGATGGCATTAAATTCG
CGGACGACGATGACGACTATATCGATAACAGAGCGAACATTGTACAGTTAAAATGCAAAAAATTAGAAGATACACCGTTA
TTACGTCTTAAAAGGAAGCTTCTTTGCAATTACGATAGCTCGATTCATCCGAATCATTTCAAAAGTAATGCCACCGTCGT
TACTTTGAGATTGATGCCGAAATTAATGGAATTAGAAAATGATCATGCTATATTGTCATTGCATAGTTGGATAACGCTTA
CTTGGTCTGATCCACAACTTATTTGGACACCGCATGATTATGATGGAATCAATTTTGTTAATGTAAAAAGTTGGGAAATC
TGGACGCCCAATTTGTATGTCTACAACTCTGGTGATATGTCGGAATATCAACTCGAATTACCGGAGATGAAATGTTTGTT
TTTTAATGAAGGCTTCGTTAGTTGCGTACCGGCTGTAAAATTTGTTGCCAAATGCGATCCCGATTATACTGATTTTCCTT
ACGAAAAATATCAATGTCGCATCACATTAGGTTCATGGAGACATACAGGAGTAGAAGTCGATTATCAGTTAGATAGAGAT
GGGATTACTATGGATGGCTACGAGAATAACGCAATGTGGGACTTGAAATTTATAAATGTAGTGAAAGAGATGAAAACGCA
TAAATGCTGCCCAAATGACACTTTTCCAACAATTGATTATAATTTTTTATTGACACGCTATCATCAAACAAATCACATAG
TTAACACTATACCTGCTATTGTTTTGATATTTCTTACTTTAACGGTTCTTTGTTTGGATCCAAAATCGATAGAGCGAATT
GCATTGGCAAGCGTAAATTTTATTTGTCACCTGCTCTGCTTATATCATATGTACTGGCACTTACCTTATAACGGCATTAA
TATACCTAAGATATTTATATTTTATGGTGAATCCGTTGTTTTGGCTACTCTTGTTATTGTCTTAACGGTGTTGTTACGCA
AATTGGAAGACATGAACACAAAGATGCCAAATTGGATCTCATCCATGACAATGTTTGTCTTGAGCAACAGCATTAGTCGT
TTCCTGATCTTGAAGGATAATGAAACTAAGGTGGCAGACAAAAATATAGTGACTGAAGAAAACTCGAATGTTCCAAAATC
CGAAACAAAGATGAAGGCACCATCTTGGAAACATTTTGCTACTACTATCGATTGGTTGTCTTTTATATGCGTGATTCTTA
CTTATATTATCACGCTAATCATATTTGTTAATTCTCTCTCCGTACAAGAAAATGTCGTAACAGATGGATGTAAAAATCTG
GAAGATACAACACCATTATTGCGCCTTAAAAATTATCTTTTTTGCAAATATGATAGTACCGTCCGTCCAAATAATCACAA
CATAGTTACTAACGTCTCTCTAAGGCTGATTCCAAAAATGATGGAATACCTTGATGACCAAGGTGTATTAACACTTCACA
GCTGGATGTCATTTTCCTGGACGGACACGCATCTTGTTTGGATGCCAAACAATTTTGGTGGCATTAATTATATTCAAGTA
AAATCCTACAATCTCTGGGTGCCCGATCTAGGCGTATACAATTCTGGTGATTTGTCGAACGATCTACTTGAGCTGCCTGC
AACGGATTGTTTAGTCTTCAATACAGGTTCCGTCATTTGTGTACCGGCTGTGAAATACATTTCAAAATGCGAAGGCGATT
ACACTTATTGGCCTTATGATCAGCAGAAATGTCGTATTGTACTTGGCTCATGGTCGTACGCGGGGGAGGAAGTCGATTTT
CATCTAAAGGAAAACGGGATTTACATGGATAGTTATGAAAATAATACATCGTACGACTTGAAGTTTATAGACGCAGTGAA
ACATGTTAAAAAATACAAATGTTGTCCAAACGATACTTTCCCCAAGATTGATTATACATTTTTGTTAACTCGGCATTATG
GTATAAATCACAAAACTATCGTCACACCAGCAATTGCTTTAATATTTCTCACTTTGACGGTGCTTTGGTTGGATTCGAGA
TCGATCGAACGAACGGCGGTTGCGAGCGTGAACTTTATTTGCCATTTGCTCTGCATATACGACTTGCACTGGCAATTGCC
ATATAATGGTAGTAATCCCCCTAATATATTGCTATTCTATCGCGATTCCTTGGCATTGGCTACTTTCTCATTAATCTTGA
CGACTTTGTTGCGCAAACTGCAAGATATAAGTACAGACATGCCAAGTTGGATCTCATCGACGACAATGTTTATCTTGAAC
AATAAGGCTGGTCGTTTTTTAATCTTAAATGACGAGGAGTCCAAGATAGCAGCAAGTAATAATTGCAATGATGTCGAAAG
CAAATCGCCTATGTCACGACTGAAGAAAAGTCTTCTCTGCGAGTACGATTCCGAAGTAAGACCAGTCCAAAACAACAATA
ACAAGACGCGGGTAACATTTCGAATGATACCGCATTTTTTTCGCTATACCTTTGAAGAAGAACTTTTCGAATTACATACG
TGGATAGGGATGGGATGGCTTGATTCACATTTGACATGGAATCCTGAACAATACGATAATATCAAGTGGATAACTATATC
AAGCAATCAAATTTGGGTTCCGGACATTTTAATACATAACGAACGAATTGGAGAGAGTTCATTGGGTAATAGCCATTCGA
AATGTTGGGTCGAAAAACATGGAATGGTTCAATTGTTAACGGTAGCAAAATATGTTACATATTGTTTCGCGGATAATACG
TGGTGGCCATACAACATCATGAATTGCACCATACAAATTGGATCGTGGTCACATTCCGGTGACGAGATCGATCTCGTTCC
TTTGCAGAATATGTCATTAGAATTAGTTTCTAAAGATGTTGAATGGGATTTGTTAAAAATGTACGTAACTAGATGGGAAA
GCAAGTATAAATTCAATGAAGGTTCCACAGCTAAAATGCTTTCTTATCATTTTATTCTAAGAAGACATTCGGGCATCATA
CGAATTGCGTATATATTGCCTAGTATAGTGCTAATGGTGATGATTCTGACGGCATTGTGGCTAGAACCGAAATCTTTCGA
GCGAATGATTATTGCTAATATCAGTTTCATTTGTCATTTATTATGTATACAAGCCATACACTGGGAAGTGCCAAAGAGCG
GCTTCAACGTTCCTAAACTGATCATCTTTTACGAGAGCTCTTTCGCAATAGCATCGTTTACTCTCATACTTACTAGTATC
CTGCGACACTTGCAAGAATTTACTACTGAGCCACCCACGTGGATTTCAGTCAGCACAACATCTATATTACGTAGTCGAAT
TGGACAAATTCTTCTTGTCAGTATTTTAGATCCGGCCATAACAGCAAAAATAGAAATTGACGCAGATGACAATACTGATC
TTGTACAATCAAGTAGCAAGAAATCGCCATGGACATATGTTATAGTACTCATAGGGTGGTTTGCATTTCTAGGTGTGCTT
CTCACTTATATCATATTACTAAGCACGTATTTTCCTACACATTATACTGTAGTACCATAA
PEP:
>CFLO18740-PA
MVQCRDTADRYGGERTMPDFDFPPRSNCGVALRVQHVQLYRVADFQKRSAGVQNVRTQTGITRSIVDVREPILLKVLVPP
THTALSGDVTVFILDSAETESFAISTNTVITNDTNGMKKDEEDKIDPEKNEINGSHEPLVLRVLYVDGLTSELIGDIPLN
TLPHKGENISVIIPCGIFSRGGIYTLRLQYKFSTVAARYNTAITGLPEIEMSSALDVKWPIPSLLLESQHFGTYPSQPVI
ATIKYNGISCVPDNGIPVAAYSLQLIYCGTTTAACDPQNNSRTQVLYYEEINGFTSPKVIELKCDFFGLAGNYALRLKAS
DINPSAPTTSAYIKVEWSDEFSFNVHARSIYPCEGSAGISVLFQYPACRLQGDRIRVYGRLRADVSSLAPPSALHYIAEL
KAAPGKHSLNFDCDIFTEKFIEYCFVYVSQAITGAMAEVKLACIPTFPLLENDAAGWGPWSAWSPCSSSCVGGTRNRYRF
CDTPPPKYGAKFCQGKAVETESCGGTGRIDFQEAWNTEGWECRHGTTLAATRPEVTAQIGLQCRCGCIINFHDQILNKIL
AANTQACPGRSFWLLQAKSDYVIRLHLDQTQFPCPGQYFRIRDGDSRSAELLTDIAFDKSAPATGTIFSSGQNLLLEFFS
DESTASGDSCVGGFLGHASMFKKLYEKNKTLLSSETSSTSTVERWIFWGPAHLATASLLILIFFISIFLALQFALKYRKY
HIAEDLDTLSEHSGCSDTMERAKSMSSTTLISEVVSLVGLPRKCTPRLSKRKLAPCAVEDGYDSSETLAEYEDETSLSST
TLKQDNEESSIERSIIPNKLHVNETSSIVSAIMAVGQPEVKYAQPVKLRTLGSNTPAVDKLISDDTTCQSTASITNSPHI
ARPHHYASNPLQSKDSTSSPLSGVSTLRSGKETKDRRNRERLLQGPGSEFSLTNPETDMELDYYDYNVANAGAAPGSYLG
MDPAFLLWIPPLSMSEDSEGPSADRPDCFQGTTASPTLFRLPEEITEGATLTPAEYRRMRQRLASNVEETRLSNFEQKRQ
DSTSSSSSSKNDSSSGGSALSEDSINSEGRAARLNERLLPIHRILEDSRTRVSEESLCGQLGTDRTQCIIPNRLQATKFD
FSQEQDTSSRSSQQGSYVNITDNVTKSEDKAEKSKQTSKRYTEDAMLHNATSKSFFNQKTKDVSQEDKRNRYFKNENTSS
KNTSGKSSSKTQGYVDGREKDLQDAKDDSKSDILLTNLNVTSNQCKYRDFMQFTQPREMNKLSDCTNIPMIEFSGPRLNS
PATARRLTTDNFNISLSKKEIQSPDYGVESDIKVESHDSFYDLIRENEDGIKFADDDDDYIDNRANIVQLKCKKLEDTPL
LRLKRKLLCNYDSSIHPNHFKSNATVVTLRLMPKLMELENDHAILSLHSWITLTWSDPQLIWTPHDYDGINFVNVKSWEI
WTPNLYVYNSGDMSEYQLELPEMKCLFFNEGFVSCVPAVKFVAKCDPDYTDFPYEKYQCRITLGSWRHTGVEVDYQLDRD
GITMDGYENNAMWDLKFINVVKEMKTHKCCPNDTFPTIDYNFLLTRYHQTNHIVNTIPAIVLIFLTLTVLCLDPKSIERI
ALASVNFICHLLCLYHMYWHLPYNGINIPKIFIFYGESVVLATLVIVLTVLLRKLEDMNTKMPNWISSMTMFVLSNSISR
FLILKDNETKVADKNIVTEENSNVPKSETKMKAPSWKHFATTIDWLSFICVILTYIITLIIFVNSLSVQENVVTDGCKNL
EDTTPLLRLKNYLFCKYDSTVRPNNHNIVTNVSLRLIPKMMEYLDDQGVLTLHSWMSFSWTDTHLVWMPNNFGGINYIQV
KSYNLWVPDLGVYNSGDLSNDLLELPATDCLVFNTGSVICVPAVKYISKCEGDYTYWPYDQQKCRIVLGSWSYAGEEVDF
HLKENGIYMDSYENNTSYDLKFIDAVKHVKKYKCCPNDTFPKIDYTFLLTRHYGINHKTIVTPAIALIFLTLTVLWLDSR
SIERTAVASVNFICHLLCIYDLHWQLPYNGSNPPNILLFYRDSLALATFSLILTTLLRKLQDISTDMPSWISSTTMFILN
NKAGRFLILNDEESKIAASNNCNDVESKSPMSRLKKSLLCEYDSEVRPVQNNNNKTRVTFRMIPHFFRYTFEEELFELHT
WIGMGWLDSHLTWNPEQYDNIKWITISSNQIWVPDILIHNERIGESSLGNSHSKCWVEKHGMVQLLTVAKYVTYCFADNT
WWPYNIMNCTIQIGSWSHSGDEIDLVPLQNMSLELVSKDVEWDLLKMYVTRWESKYKFNEGSTAKMLSYHFILRRHSGII
RIAYILPSIVLMVMILTALWLEPKSFERMIIANISFICHLLCIQAIHWEVPKSGFNVPKLIIFYESSFAIASFTLILTSI
LRHLQEFTTEPPTWISVSTTSILRSRIGQILLVSILDPAITAKIEIDADDNTDLVQSSSKKSPWTYVIVLIGWFAFLGVL
LTYIILLSTYFPTHYTVVP
Swiss-ProtAcetylcholine receptor subunit alpha-L1
SUPERFAMILYSSF49854  Spermadhesin, CUB domain superfamily     
Gene3DG3DSA:2.60.120.290     
PfamPF02931  Neur_chan_LBD; Neurotransmitter-gated ion-channel ligand binding domain     
SMARTSM00209     
ProSiteProfilesPS50092  TSP1; Thrombospondin type-1 (TSP1) repeat profile.     

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