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Gene detail [Fasta]

Species Camponotus floridanus
GeneCFLO19898
Positionscaffold58:607910..615217[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/cflo_33/?name=CFLO19898
sequence mRNA: 
>CFLO19898-RA
ATGATTCCTGAAAGCGATACGCCCTCTGTGGACCTTAAAAACGTGCACAGCTCTACTCACATCTACATTAGCTCTACAGT
ATGTCCGGTTCCAATTTGGCATTTAACTCAAAAGCAGCAAAAGAGTGTCGTCGAATCGACAACGACACTGAATTATAGTT
ACACTATAGCCTTACAAATGGCGGATAAGGCTATGATGAAGCAAATTGCGGAACAAAAACTTAAGGCTTTCTCCATCGGT
ACTATGGGTAAACGGCCATTGAGTAAAAAAGAGCTGGAAGAACAACGTAAGAAGGAACAAGAACAAGCTGCGGCTCAGGC
ATTTGAAGAATTTGTGGCAACGTTTCAAGAAACACCAAGTAAAACAGCTAGCAAGGTATGGGTTAAAGCAGGGACGTACG
ATGCAGGCAAAAGACAGGAAGACACGAGGGAGAAGGGGAAACTTTATAAACCACAATCAAAAATCTCAGAAATAGTTGAT
ACCAGATCATCAGCGGAACAAGCTCAAGAATATGCAAGATTGCTTGGAACGAATGAACGAAAACTAGATAGATTGGGTAA
AAAGAAAAAGGAAGGAGAAAAAAAGAAAAGCAATCTTGAATTATTTAAAGAAGAGCTGAAGATGATACAAGAGGAACGTG
AAGAGAGACACAAATATAAGGGTGTAGTGAAGACTGTAATATCTGCGCAATCTGAAGATCCAATGTTGGCTGCTTTAAAA
TGTGTGGAAGGTAATAAATCCTCATTTCCGGATCCGCGAAAGGCTAATCTGCATAACTTCATTGATGATCCCCGTCTCTT
AGCCCTGATATATGAGGATGGCTCATTTGATAATGGTGATCCAAATACCACAAACTTGTACCTGGGAAATTTAAATCCAA
AGATCACAGAACAGCAACTGATGGAAATATTTGGTAAATATGGTCCACTGGCTAGTATAAAAATAATGTGGCCACGCAGT
GACGAAGAGAAAGCCAGACAAAGGAATTGTGGTTTTGTCGCGTTTATGAGTCGTAAGGACGGAGAACGTGCATTAAAAAA
TCTTAATGGTCGCGATATAATGCAGTACGAGATGAAATTGGGCTGGGGGAAAAGTGTACCAATTCCACCTTATCCCATTT
ATATTCCACCTGCTTTGATGGAGATCACGCAGCCACCACCCCCATCTGGTCTTCCATTTAATGCTCAACCACATCGTCGT
GACAGGCACAAGATTCCACGTATCCGCAATATACAGACCGCGGAGCCGCAGGAAAAGGAAAATTTTGAAAAGAATGCTGT
TGTCAAAGTGGTGATACCAACAGAAAGAAATTTAGTGATGTTAATACATAGAATGGTTGAATTTGTAATTCGAGAAGGAC
CAATGTTTGAAGCAATGATTATGAACAGAGAATTAACTAATCCAATGTTCAGATTCTTATTTGAGAATTATTCTCCTGCA
CACACTTATTATCGCTGGAAATTATATTCTATCTTACAAGGGGATGGACAGAAAGAATGGCACACAGAAGATTTTAGAAT
GTTCAAAGGTGGAAGTGTATGGAGACCACCACCAATCAATCCTTGGACACAAGGCATGCCGGATGAATTAATAGAAATGG
AAGAGAGACAAGAACCAAGGAGGGGTAGTCTTTCAATCAGTCAGCGAGATCGTTTAGAAGATTTGTTGAGAAATATATCA
CCTGAACGAATAAAAGTAGCAGAAGCAATGGTATTTTGTATAGAACATGCAGAAGCAGCAGAGGAGATTTGTGATTGTAT
TTCAGAATCATTATCAATATTACAAACTCCTGTAAATAAAAAAATTGCAAGATTATACTTGATATCTGATATATTACATA
ATTGTGGAGTCAAAGTGACTAATGCCACTATTTATAGAAAAGCATTTGAGACACGTCTTCTAGATATTTTTAGCGAAGTT
CATCAAGCATACAAGCAGTTTGATAGTAAATTAAAGGCAGAAGGATTCAAAGTCCGTGTTATGCGAATGTTTAGAGCATG
GGAAGATTGGACAGTTTACCCAAGAGATTTTCTTGTTAAATTACAAAATACATTCCTGGGACTTGTTTTGATGGATGAAC
CTGAGCCTGAAAATGATGAAGATATTGATGGTGCACCATTATCTGATGTTGATGGTGACGGTACTGAAGATTTAGATGGT
GTACCACTTGACGGTGCAACCCTGTTGAAAGGTGCCATGAAACATGGCCTCACATCTCAAGCAACTTCAAATTACGATGA
TATTGATGGAGTGCCTATGGATGAAGATATTGACGGAGTACCAATGGATGATGACAACAATGTAAACACGCGAAATAAGG
AAGACGAAAAGAAATCGACAATACCAGCTGGATTTGTTCCTTCACGATGGGAAACTGTTGATCCCGATCAGGTCGAGGCA
CAAGCAATGACTACCAGTAAATGGGAAGAATTAGGTCAAAATGAAGATTCTAATTCTCAAGATACTAGTATGGATTCTAG
TGGTAGGGATTATAATGAAGAAAGGCGAAATAGATTACGTGAAATTGAAGTAAAAATTATGCAATATCAGGATGAATTAG
AAAGTGGTAGAAGAACATTAAAGTCTGGTATGACGATACAAGCACAAGTAGAGCATTATAGAAAAAAACTTATAAGAAAG
AGCGAGAGAGAAATGAAGGACATAAAAAGCGAAGAACGTGATGATGAGAAACGAAGGGAGAAGAAAAGAAGCCGAAGTAC
CACACCAGAATCTCCTAGTCACAGCTATCGTAGACGATCCTCGGCAAGTCCATCGTCCAAAAGTGTAAGATATAGATCAC
GCAGTAGATCGCCACGTTGCAAACGTAGATCAAGATCTCCATATAAAAAACGTGTACCGGTAACCCCGTCCCCTCCTCGT
ATTCGACGTACACCATCGCCTTCCTTTTCTTCAGGCAGAGGATCACGCAGATCGCCCACTAATGAACGTTGTGATAGGAA
AAGATCACGTAGATCACCCTCTTTATCGCCTCCACCGCCTCCACGTACTTCCTCTAAACATAGAGCTTGTAGTCCGCCTT
CCCCGCGTAAGCGACACAAGCATAAATATTAA
PEP: 
>CFLO19898-PA
MIPESDTPSVDLKNVHSSTHIYISSTVCPVPIWHLTQKQQKSVVESTTTLNYSYTIALQMADKAMMKQIAEQKLKAFSIG
TMGKRPLSKKELEEQRKKEQEQAAAQAFEEFVATFQETPSKTASKVWVKAGTYDAGKRQEDTREKGKLYKPQSKISEIVD
TRSSAEQAQEYARLLGTNERKLDRLGKKKKEGEKKKSNLELFKEELKMIQEEREERHKYKGVVKTVISAQSEDPMLAALK
CVEGNKSSFPDPRKANLHNFIDDPRLLALIYEDGSFDNGDPNTTNLYLGNLNPKITEQQLMEIFGKYGPLASIKIMWPRS
DEEKARQRNCGFVAFMSRKDGERALKNLNGRDIMQYEMKLGWGKSVPIPPYPIYIPPALMEITQPPPPSGLPFNAQPHRR
DRHKIPRIRNIQTAEPQEKENFEKNAVVKVVIPTERNLVMLIHRMVEFVIREGPMFEAMIMNRELTNPMFRFLFENYSPA
HTYYRWKLYSILQGDGQKEWHTEDFRMFKGGSVWRPPPINPWTQGMPDELIEMEERQEPRRGSLSISQRDRLEDLLRNIS
PERIKVAEAMVFCIEHAEAAEEICDCISESLSILQTPVNKKIARLYLISDILHNCGVKVTNATIYRKAFETRLLDIFSEV
HQAYKQFDSKLKAEGFKVRVMRMFRAWEDWTVYPRDFLVKLQNTFLGLVLMDEPEPENDEDIDGAPLSDVDGDGTEDLDG
VPLDGATLLKGAMKHGLTSQATSNYDDIDGVPMDEDIDGVPMDDDNNVNTRNKEDEKKSTIPAGFVPSRWETVDPDQVEA
QAMTTSKWEELGQNEDSNSQDTSMDSSGRDYNEERRNRLREIEVKIMQYQDELESGRRTLKSGMTIQAQVEHYRKKLIRK
SEREMKDIKSEERDDEKRREKKRSRSTTPESPSHSYRRRSSASPSSKSVRYRSRSRSPRCKRRSRSPYKKRVPVTPSPPR
IRRTPSPSFSSGRGSRRSPTNERCDRKRSRRSPSLSPPPPPRTSSKHRACSPPSPRKRHKHKY
Swiss-ProtU2 snRNP-associated SURP motif-containing protein
KEGG     K12842  SR140; U2-associated protein SR140     
SUPERFAMILYSSF54928  RNA-binding domain, RBD superfamily     
Gene3DG3DSA:3.30.70.330     
PfamPF08312  cwf21; cwf21 domain     
SMARTSM00582     
ProSiteProfilesPS50128  SURP; SURP motif repeat profile.     
CoilsCoil

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