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Gene detail [Fasta]

Species Bombyx mori
GeneBGIBMGA011343
Positionnscaf3026:2539361..2550804[GBrowse]
SilkDBhttp://www.silkdb.org/cgi-bin/gbrowse/silkdb/?name=BGIBMGA011343
sequence mRNA:
>BGIBMGA011343-TA
ATGAGTGACGACAGCGAGGACTCGCCTCCGCGACCTAAACGTAAAATTAAAAGAGTGACGATTCTGTCATCCTCCGAGTC
CGAGAGCGACGACAGCGTCACTGCAGTCGGGACACGTCGAAACCGAATGAGGGTAGTGAGCGACGATGAGATTGACAGCA
GCGGTAGCGAGGTGGTGCGCACTCGTCGAGGACGGGCTCTGCCCAAATTACGGGATTCGGACAGCGAGGGTGCTGCATGT
CTCGCCGACGCTGTACCGAGGCCGACCTCAGGGTTCGCTTCCGACAGCTCAGAAGGCAACTCCGAAAAATGTTCCATTTG
CCTTATGCGGTTTACTGATCAAGAAGTAGGAACCCCTCAAAGTTGTGAACATATATTTTGTCTGGATTGTATTACTGAGT
GGTCAAAAAATGTGAATACCTGTCCTGTGGATCGGCTGACATTTGACTCTATTGTAGTGAGAGCTTGTGCCGGTGGACGT
GTACTGCGCACTGAACAAGTGAAAGTTATTGAAAGGAGACCTTCTGTAGACGTACTGGTGGTTGAAGACCCAACAGTGTG
TGAGGTATGTGGAAGGTCAGGAGATGAAGAGTCAATGTTATTGTGTGACGGGTGTGACCTCGGATACCACATGCAGTGCC
TTTCCCCCCCTTTAACTGAGGTCCCTATAGATCAGTGGTACTGTCCCAGCTGTAATGACTTGATTGATGTAGTACACACT
TCTGAGGTGGACGACCTCCTGTCAGATGTGTTCGTAGATATGTATATGCCGATTGGACCTCGTCCTTCACCACTTAGACA
GCCTCGTAATGTGAGGAGATCATCTAGACAGAGATCAACAATAGAAGGTCCATCAATATCTTCAGATACACAAGGCAATG
TGTTAAACTCAAATGTCATTCCCTCCACATCACGAGGTTCACTATCTATTCAAAGCAGTAGTTCTCGAGGGTCAAGGACA
CGCAGAGTGACAACTTCTCGTCCAACAAGGCGTCGAAAATATAGAAGACAAAAAACAGTCATAATAGAATATGAAGAAGC
TGAAAATGGAAAAGTAGCAATCAAAACAGTACAAAAGAAAGTCGCAAGAAAAAAGATAAGGAAGCGAAAAACTCGCACGG
CGGCCCGGCGCGCCCTGGTTCGGGAGAGTGTGCGCGTCCGGCTCGCCGCCCTCCGTCCCCCCAGCCTACCCCTCGCCCCA
ACCCGCCTCGCCCGCACCCTGACCCGCCCCGCCCTGCGGCTGTTCGGGGACCCGCTGGAGCTAGACTACTTTTCGGACGA
GGCGCCTGGCGACTCGGAGTCTGCCAGCACGGCCGTGGCTGCGAGATCCACTTCCGCTCTGTTGAGCGCTCACAGGCAGG
CAAGACGAAAGGCCGTTGGCATTCCATCCCCGCCTGTGGCTGCTTCCGCGCCGGATCTCTTGTCGAGTATAATGGAGAGT
CAAACACTGCTGCACGCCAAGAACTCAATAATGTCAGTCACCGGCGACGGCAAGCTCGAGATAAAACTACGATCACCGAT
CGCCAGGCCTCGGGAGCAGCGCTCGGACCCGACGACGAATGGGAGAGTCGACTTGACGAAGGGCGAGGATTCTGCCAAGA
AAGCACCCTCCTATCCGGGTCAGCATCGCAGTGGCGGCTGGGGAGGAGGTTACCGCGGTAACTATCACCGGGAGCAGGGC
CACACGGGGTTCGGGCGTGCAAGTTACGGGGGTGCGGGGTACGCGGGCGGCGGTCAACAGGCTCAAAATCAGAATTCCAA
CTTTGACGACCGACAGGGAAGCGCGTACCGTCCGATGGACGCGTGGCGCGACGAGCCCCCCCTCCACGGAGACTACGGCA
GGTGGCCCCCGCGACATCCGCTCGCACACGACGTCCCCTCCGATCGAAACCGCCGCAACTCGGACCGCGGTCCCCCACCA
CGCGCTCCGCCCCCCTGGCGACCCTACGTGCCGCCGCATCCCTCGCGCCACTCCTTCGGGGGCTTTGACAACCCTCTAGA
CATGCGCACGGCACCGCACCACTACGACCGCCCCACCGTGGCGGCGCGTCCTCTGCCAGAACCGCCCATCTTTAAATTCG
ACGATAACAACGAGGTCGAGCGGTCGGAAGACGAACGCAGCGACCCCGACCTGGTGATCGACACGGACAAGTACGACCCG
ACCGAGCCCACTAACGACGACAGCGCCGAGGAGCCCGAGCTCCCGCCAGAGGGACCGCACGTTGACGTCAAAAGTGCAAA
TTCTAACTTTCAGTCGATCGATGAATCCGTCGCCGAGTCCGAGACCGAGGCGGAGGCGGAGGGAGAGACGCACGGGGTGG
GGGCGGGGGCCGCGGGGATGGAGGCCGCCGCCGTGCCCGCCGCCCTGCTGGACGACGCCGTGCGCCAGGTGCTGGCCGAG
CACCGCGGGCTGCTGGCCGCGCCGCCGCCCCTCAGCGACGAGGAGGACGACGGCGACTGCCCCAACTTCTCAATTTACTC
GGCCACCAGCGTGCACATCGCCAACGACGCGGCCGCGGGCGTGCTGCCGGCCGAGAACCCCGCCCCGCGCCCCTCCGACG
ACCTGCGTGACCTCGTGCAGGAGGACGACGACCTGTCGCCGCCGCCCCCCCTCGATGCTGTCCCCAAAAAGAAATCTGAT
GAAATTTACAACGAAAAAGTATCGAAAAGGTGTCCCATCACCACCGACACTCGAAGCCCCATAAAAATAAAAATCAACGC
TCCCTCGTTGATAAAGAAGCGTGTGTCTCTCTACGACGAAGAGGAAGATTCAATGCCGGCAGAATCGGGAGCTCCTCCAG
AAGACGAGAATAATAAAGATAATGCAGTTTCACAGATGGCCTCATCCGACTTGCACAATAGTGACCTAAATTCGCACGAG
CTCGATAGCGCCAAGCAAGTGACGGAAGCAGATGCCTTCCCCGAAGCCTCGTGCGAGCCTGCAGCCGACGGAGGTGAAAA
CGTAAAAGATAACCGAACTATACCGAGCAGTGATGTGTTGGAGACTGCGCATAAATCTGATCACACGGAGCAGTCCGACT
CGGAGACCCTTTCACCGGTCCGCACCCCCGGTCCCTTTCCCCACACCGCCCCGCCACCCCTCGCGCACTTTCTCCGAGCC
CCCGACGGCGGCGGCGAACGTCCACATCTCGCGGCAAACGAAATGAGCCGCGTCGACGTCGTTCAACCGAACGTGCCCGG
AAACGGCGACGATCAGTATCCGAAATCGCCTAAGCGACGCAGAATTCGAAATCGAAGCGCGAGCAGGGTTCCGGCGCCGT
CTCCGACACGCGGCTCGCCCTCCCCCGCGCCCCCGGCCGTCTCCGGTGCCCCTGTCGCTCCTGCGCAATGGACTTCTCCC
TCCCGCCTCGCGTCTCCACGCACACCCCCCGCCGCGCCCCGCCGGCGCCGCGACCCCGCTCGCCACCGTCGCCACGCGCG
CGATCCCGGCGGAGCGTCCAAGGAGGTGTTCACGTCCGGCGACAACATCCTGGTCAGCGTTAGCTTTAAAGATCAAGACA
GAGTCGTCGATGACGACAAACGGGAGAGACGTCGGGAGCGACGACGTCGCAAACGAAAGACCGCAGCACCTGAGCCCGAA
GTCGGTGTGCGACCCGTCGCCATCATTGATTTGGAGCGGTCTCCATTCCGCGAACTGACGCCGTCCCCGCGCGACGTCAT
CGTGCTCAGCGACAGCGACCCCGGGGAGAGGGAACCCGCGCCGGCCCCCGAGGTTGCCGCGCCTGAACCGGTCGGACCGA
AGACTCCGCCCGAGCCGACGACCGCCGAGCCAGCGCCAGCCGCAGACCCGGAAGACGGCCGCGGCCCTAACACGCCGCCC
GAGCCCCCGGACTCGCCGGACGCGTACGACCCGTACGAGCCCACGAGGTCCGCCTCCGCCTCTCCCTCCCCCGCACCTTC
CCCCGCGCCCGCCCTCAGTCCGCCGCGCCCCACCATCACGCTCGAGGCCGCGCAAAAAACAAACATGTCCGCCGACGAAG
TACTCGACAGAAGACCGCTGTCACCCATGGAAAAGGTGATGGCGTTGCTGCAGTCTACTCGAGACGTGTCTCCGGAGCCG
CCGCCGTGCGACCCCCTTCCGACCGCCGAAGTGACCCCCGGGCCCCCGCCGGCCGCCGCCCCGCAAGTCCCGGCCGCCGC
CCCACCCCGCATCGTGTTGCCGGAGGCGACGCGGACACAGCCGCCGAAGCTGTTCCTGGCGAAGCCTTCTCCGATCAAGT
CGGATCCTATAAAGCCGATGCCGGCGGCGAAGATAGCACGCGTCCCCCTGGGCAGCGGTGGGGGGGGTGCGCCGGCGGTG
TCCCTGCCGGGGGAGGACTCCCCGTACTCCCCGGGCTCCAGCGACTTCGGGGAGTTGTTCGAGCCGCCCCGCCGCGACAT
GTTTGAGGCGCTGCTGGACCGGCCCCGACACAAGTCCCGCTCCAACGCAGCTAAAGTGCCCGTCAAACTCGACCGTCACA
AAGGGAAGACTCAAGTAGGTGTGAAAATAGATGAAGATAGTTTGAAGATACTGGACGAACTCCCCAGCTCTGCGGTCGAG
ATGCAGGTCAAGAGTAAAGTTAGTATCGAGATATTTGTTAGGATCAATTTTAGTATTAGGTGTATTCGCTACCATGATAC
AGCTGCTGCCGACCTAGAGCTGAGCTCTATGGCGAAGCTAAGTCAATTCTTGAAGAAGCTCAACAGACAGGAGCGAGTGG
TTGAAGAAGTGAAGTTGGTCTTGAAGCCGCACTACAACAGAAAGCGCATCACTAAAGAAGAGTACAAGGATGTGCTCCGA
CGAGCTGTCCCCAAGATCTGCCACAACAGAACAGGAGAGATCAACCCCACGAAGATCCAGGCTCTGATCGAGGCTTACGT
GAGGAAGATCCGGAAGAAACACAAGCTCGGCCTCGCGTAG
PEP:
>BGIBMGA011343-PA
MSDDSEDSPPRPKRKIKRVTILSSSESESDDSVTAVGTRRNRMRVVSDDEIDSSGSEVVRTRRGRALPKLRDSDSEGAAC
LADAVPRPTSGFASDSSEGNSEKCSICLMRFTDQEVGTPQSCEHIFCLDCITEWSKNVNTCPVDRLTFDSIVVRACAGGR
VLRTEQVKVIERRPSVDVLVVEDPTVCEVCGRSGDEESMLLCDGCDLGYHMQCLSPPLTEVPIDQWYCPSCNDLIDVVHT
SEVDDLLSDVFVDMYMPIGPRPSPLRQPRNVRRSSRQRSTIEGPSISSDTQGNVLNSNVIPSTSRGSLSIQSSSSRGSRT
RRVTTSRPTRRRKYRRQKTVIIEYEEAENGKVAIKTVQKKVARKKIRKRKTRTAARRALVRESVRVRLAALRPPSLPLAP
TRLARTLTRPALRLFGDPLELDYFSDEAPGDSESASTAVAARSTSALLSAHRQARRKAVGIPSPPVAASAPDLLSSIMES
QTLLHAKNSIMSVTGDGKLEIKLRSPIARPREQRSDPTTNGRVDLTKGEDSAKKAPSYPGQHRSGGWGGGYRGNYHREQG
HTGFGRASYGGAGYAGGGQQAQNQNSNFDDRQGSAYRPMDAWRDEPPLHGDYGRWPPRHPLAHDVPSDRNRRNSDRGPPP
RAPPPWRPYVPPHPSRHSFGGFDNPLDMRTAPHHYDRPTVAARPLPEPPIFKFDDNNEVERSEDERSDPDLVIDTDKYDP
TEPTNDDSAEEPELPPEGPHVDVKSANSNFQSIDESVAESETEAEAEGETHGVGAGAAGMEAAAVPAALLDDAVRQVLAE
HRGLLAAPPPLSDEEDDGDCPNFSIYSATSVHIANDAAAGVLPAENPAPRPSDDLRDLVQEDDDLSPPPPLDAVPKKKSD
EIYNEKVSKRCPITTDTRSPIKIKINAPSLIKKRVSLYDEEEDSMPAESGAPPEDENNKDNAVSQMASSDLHNSDLNSHE
LDSAKQVTEADAFPEASCEPAADGGENVKDNRTIPSSDVLETAHKSDHTEQSDSETLSPVRTPGPFPHTAPPPLAHFLRA
PDGGGERPHLAANEMSRVDVVQPNVPGNGDDQYPKSPKRRRIRNRSASRVPAPSPTRGSPSPAPPAVSGAPVAPAQWTSP
SRLASPRTPPAAPRRRRDPARHRRHARDPGGASKEVFTSGDNILVSVSFKDQDRVVDDDKRERRRERRRRKRKTAAPEPE
VGVRPVAIIDLERSPFRELTPSPRDVIVLSDSDPGEREPAPAPEVAAPEPVGPKTPPEPTTAEPAPAADPEDGRGPNTPP
EPPDSPDAYDPYEPTRSASASPSPAPSPAPALSPPRPTITLEAAQKTNMSADEVLDRRPLSPMEKVMALLQSTRDVSPEP
PPCDPLPTAEVTPGPPPAAAPQVPAAAPPRIVLPEATRTQPPKLFLAKPSPIKSDPIKPMPAAKIARVPLGSGGGGAPAV
SLPGEDSPYSPGSSDFGELFEPPRRDMFEALLDRPRHKSRSNAAKVPVKLDRHKGKTQVGVKIDEDSLKILDELPSSAVE
MQVKSKVSIEIFVRINFSIRCIRYHDTAAADLELSSMAKLSQFLKKLNRQERVVEEVKLVLKPHYNRKRITKEEYKDVLR
RAVPKICHNRTGEINPTKIQALIEAYVRKIRKKHKLGLA
Swiss-ProtPHD and RING finger domain-containing protein 1
KEGG     K17586     
SUPERFAMILYSSF57903  FYVE/PHD zinc finger superfamily     
Gene3DG3DSA:3.30.40.10     
PfamPF00628  PHD; PHD-finger     
SMARTSM00184     
ProSiteProfilesPS50089  ZF_RING_2; Zinc finger RING-type profile.     
ProSitePatternsPS01359  ZF_PHD_1; Zinc finger PHD-type signature.     

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