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Gene detail [Fasta]

Species Bombyx mori
GeneBGIBMGA007507
Positionnscaf2887:1296843..1323702[GBrowse]
SilkDBhttp://www.silkdb.org/cgi-bin/gbrowse/silkdb/?name=BGIBMGA007507
sequence mRNA:
>BGIBMGA007507-TA
ATGGCATTCCCTGAGGCGAAATTAAAGGCACTGGAAGACAAACTTTCACATCCCCGTTGGGTTGTACCAGTGCTGCCAGA
ACAAGAATTGGAAGCTCTTCTAGTCGCTGCAACAGAACTAGCTGCAAAAGGAGAAGATGTACACAATGCGGCGTGTCAGA
AATTTTACACTGATGCTCTCACAATATCTTTTACAAAGATATTAACAGATGATGCAGTATCATCGTGGAAAAATAATATA
CAACAGTGTGTAAGATCCAACTGTGAGAAGCTAGTCAAGTTGTGTGCTCTTAAACTTGATGATCCCAGATTTTTGCATCT
ATTGACTATGACATTAAACCCCAGTAACAAGTTTCATATGTTCAATGCATCGCGAACGAGCGAGGGCCTTTCGGTGACAT
CAAATACCACTGGTACAGGTCAAGGGCCTTCTCAAGACATAGAAATTTTTGCTAGGTCTCATGATCATCGTACTCCTAGG
GGGTGGCTGGTCCATCTAATTAATGTGTTTGGTCAAGCAGGCGGCTTTGTGAAATTAAGGGAGAGGTTTGAAGAGATAAT
GGGTTTTCAAAAGTCTGATCTCAATTCATCTATGAATACAGAAGAAAAGGTATTGTCTGAGATGATGGAAAAAGAAAGTG
ATGAGAGCAAGACATCTAACACCAATTGTATTGAACCAGTTCTTGTTATTGGGGAAAACAGTGATTCAATGACACAGTCT
CGTAACGACCAACCTTCATCATTAGAACAGTCTACAACTGAAACAAGAGTCACAGAGGTCTGGCATTTATTACGCCCTCT
TGGTGTCTGTCATGATCTTCTCACTGCACATACTGTTACAACATACTTATTACCTGTGCTTGAATGCATACCAACGTTGT
TAGAAAGTTTATCCGACGAAGAATTGAAGAAGGAAGCGCGAGCTCTTGAAATGTTTCGATTGAAAATGATATTGAGGTTA
TTACAAATGTCCTCATTTAATGGCAAAATGTCAGCACTGAATGAAATTAATCAACTTATAAGTACTTTTTCACAACAACC
AAAACCAGAGTGGCTCACACCTGCTGTCATAACGAATTGGATTCGTGAGAACAAAGTAGTGGACATTGTGCTTCGTGATT
CACTTCATCAACCTCAATATGTGGACAGATTAGAGAAAATGCTAAGGTTTATGATCAAAGAAAATTCGTTAACCACAGAA
GACTTGGACGCTATTTGGAAGGCGCAGCACGGGAAACATGAAGCTATCGTGAAAAACCTGCACGATTTACTGTCGAAGTT
AGCGTGGGATTTTACCCCTGACCAATTAGACCATCTTTTCGACTGTTTTAAGGCTAGTTGGGCTTCATCAAGTAAAAAAC
AAAGTGACAAATTGTTAGAGGTAATAAGAAGGCTTGCTGAAGATGATAAAGATGGAGTAATGGCGAACAAGGTTTTAGTA
CTTTTTTGGAACTTGGCACACTCCGATGAGGTATGCACAGAAATAATTGACGTGGCCCTTGCTAATCTAATCAAAATACT
CGACTACAGTTGTAGTCAAGATCGCGATGCACAGAAAACTCTGTGGCTAAATAAGTGCGTAGAAGAGTTAAAAACAAACG
AAAAATGGGTGCTTCCTGCGCTTAAGATGATGAAAGAAATCTGTTGTTTATACGAAGCGGGCGGAGGTACGGGCGTGCGA
CCTAATCTTACGAGACAGGAACTGATCGACCGGCTACAAACACAGCACTCCCTTGTCATATTGGTTACAAACTCTCTTAC
AAGTTATATGGATGGAGTTCGTAATAAACTTGCAGTTGATGGTGTTATCGATTGGGAGAATTGGTTACCCGATGGAAGAT
ATCCACACGCAGCTCAGGTTCATGAACGACTTAGTTTTTTGCGGTTCTTATTGAAAGATGGTCAATTGTGGCTTTGTGCT
GAACAGGCAAAACAGATTTGGGTATGTTTAGCGGAAAGGCCAGCGCACCTTGGAGACCGTGAAGCCTGTTTTCGATGGTT
CAGTAAACTCATGGGAGAGGAACCTGATTTGGATCCAAATATCAACTTGCATTTTTTTCGACGTAACATTATGACTTTAC
CGCCTAATTTATTAACCCATGCCGGTATTAAATGTTTTGAGAGGCAAGTGATAACGGAATGCGACGACGACATATCGGCG
CGCGGCATAGAGCTGTTGCGGGAAGTGTGCACGTGCGTGGGGCCGCAGCTGTCGCCGGCGATGCACCACGAGTCATTCCT
AACGCAGTGCTGCGCACGAACGCAACGGCTCCAACGGGAAATGGAACAGCAAGAAGATAATCCCGAAGTTTGTACAAAAA
TGTGTAGAATAATTCGTGCCATACAAGAATACATTAATGAATGTGACAGAAGGTTTTCGTCGGAGCGACAAATACTGCCT
ATCTACAGAGCCGGTCGCGGAAGACAATGTACAATAATAGTAAGATTTAACTTTCAAACTGGCCAAAGACAAATTGAAGA
TATAGAATTATTTTCGCATTCTAACGAAACATTGCATTCTTTACGAGCATCGATCCAAAGAAGATTAAAATGTGCCTCGG
ATAGTACCATTAAATTAGAACTATATGTTAACAAATTAGAATTGTTTGTAAATGGTGAACTGTTGGATTCTAGTCACGAT
AAGAAAATACTTTCACAGATACCTCTCCGTGATAAAACTTTGATCGTCGCTAAGGTTTATGATGGACAAGTGTGTGGTAG
CGGCGGATGCGGTTCCTCGAATGAATCCAGTAGTGATTCTAGCACATCTTCGCCGCCACTTTCACCTACTCCTGAAAACG
CTTTACCTGGAGTTCTGTTTGCGCAAGGCTCGTGGTACTTACCATTTATATTAGAATTGGAACATGTTGGCATTACGAAG
TTGCATGGACCATTGACTGAAGCGGCACATCTGCTATCACAAATTTGTCCTGCACATAAACTAACAGTACGTATCTCCTA
TGATTTCATATTAATTCAATTCACCACTATAAATATTGCCAATAATAAACTTTTGTTACAGATGGAGAAATTAACAGAAG
CATTGTTATGTAGGGACGACACGAAACTCAGAGATATGCTTTATGGACCATCACCACCGACTGTAGCTTACAATATAGAG
GTATTGTACAGCATGGTGATGCCGTCGTCAGACACGAGACTAGAACGCAGCCGGAATTACCAGCTGGCCTGTGTAAAGAA
GGCTCCGCTACTGGTAAAATGCCTTTCTGACAAGGATTTTTTAAAAGATGCTGCTCCCCACACCAGAAGGGTAGGTTATT
TAGCCTTAGTGAGACTGGCGAAGTTAATTTTGTACACCTTGGGATATTTATTTGAAATATTGGCGCCAGATGGATCTGAT
GTTTCGGTGGACAAAGATTTTAGAATGGATCTTACTATTTTAAGGGAGGCTCTCACCACTATACCAAATCACAGTTGTGA
AATGATCGTGAAAGCAGTAGCGGAAAAGTTAGCGAATTCATTAGGAGAACAGGTTGTGATCGCCGGAGAAGAGAGTGACT
CCGTATCGTCACTAGTGTGGTGGCGCGTCCCTACGATGGCGACGGTCCGGGCATTGTTTGCACTCGGATACTCTGTGGCG
CAGCCTGTCGAGATGACTAGCATTGTACACCCCGACGACGTTACCTTGGTCCGAGAATGTATGGAAGTGGTGACTATATG
CATGGCGCTTGGCGGCGGAAGACTGGATATGTTGCTTAACGAACCTTGGTGGCAGGATACCGCTCTTTACTTAATGATCG
ATTGCCCAAATCCACAAGTGCGCGTGTCGTGCGCGGAGCAGCTGCTGGCGATGTGTGCGTGGGGCGGCGGGGGCGGGGCG
CGCAGCGTGCTGGCGGCGCTGGCCGGCACCGCGCTGCGCCTGCACCGGCACGCCGCGCACGCTATGCAGTTTCTGCAACT
TCTCTGCCGTCTCGTCGCGCTCGCTGGACCCACCGATCGTACACTCGAAGACCTCGCGCTCGAGGTGGATTGGCTTCGAA
CCGCGAAAACTAACCCCGACACCTTGGACGACACTCTTCTCGAAGGACACCTTAATTTGACGAAAGAATTATTTGCTCAT
GTCCCGGCACAGGTCAAATACCAATATGGAGCTCATCCGGACCATAAAGACTCTGGACTTATTAAAGAAATAACGACGGA
ATTTTTGTGGCCGTACTCATGGGCTTGGCACGTGAATGGCAGCGGGAATGGTGGTGGCGGTGTAGGCGGGAGCGCGTCGG
ACTGCAGGCGCGAGCCGCCGGCGCCGCTGTGTCGCACGCCGGGGGCCGCCGCCGCCGCCGCCGACCTGCTGCTTGCGCTC
GTACACGGCTGCGTTCTCAACATGGCCGCGCTTGCACGACTGTTAGAACAAATGTTCTATAGTGACAAGACAATGCCATT
AGCTGAATGGGAATACATGCCTTGCGTGGGCCCACGGCCGCCTGCTGGACTTGTGGGGTTAAAAAATGCTGGAGCGACGT
GTTACATGAATTCTGTGCTGCAGCAGCTATACTGTGTCCGAGCTGTCAGAGATACCATACTCACTGTGCAAGGAGCAGCA
ACAGATCCCAACGAAGATTTTTCTGGAGAAAGTCACCATCACAGTATTTTAGAAAATAATATAGAGAATAATACTGACTA
TAACATCACAATATTGAAACAAGTACAGGCGATATTTGCACATTTACATTGCAGCAAACTGCAATACTATGTTCCAAGAG
GATTATGGGCCCATTTTAGGTTACAGGGCGAACCGGTAAACTTGCGTGAACAGCAGGATGCAGTTGAATTTTTCATGTCG
TTGGTCGAGTCGTTAGATGAAGCTCTGAAGTCTTTGGGACAGGATCAATTGATGGCAAAAACGATGGGAGGAACTTACTC
TGATCAAAAGATCTGCAAAGGCTGTCCGCATAGATACTGTAAGGAAGAGCCGTTCAGTGTTGTGTCTTTAGATATTAGAA
ATATGTCACGTCTCCAAGAATCATTAGAAGCTTATGTCCGTGGTGAACTGTTAGAAGGTGCTGATGCTTATCACTGTGAT
AAATGCAATAAAAAGGTGGTGACAGTGAAAAGGTTATGTCTGAACAAACTGCCCCCAGTATTAGTTATACAATTGAAAAG
ATTTGAATATGATTTCGAAAAAGTGTGTGCAATAAAATTCAATGACTATTTTGAATTCCCGAGAGACTTGGACGTCGAAC
CTTATACAGCGTGGGGCCTAGCACGAGCGGAAGGTGACTCGACTCTATGGGAGGGGGGCGAGGAGCGGACGCCTGAAACA
AATTATCAACTCAGCGGGATCGTTGTACACTCCGGCCAGGCTTCCGGTGGGCACTATTATTCATACGTGCTCTTAAGGGA
TAACGGAAGCGAAACTGGCCGTTGGGTAAAATTAGACGATGGCGATGTATCGGAGTGTGCAATGCACGATGATGAAGAAA
TGAAGGCGCAATGCTTTGGTGGTGAATATATGGGAGAGGTTTACGATCCAATGTTGAAAAGGATTTCATATAAACGACAA
AAACGATGGTGGAATGCCTACATGCTATTTTATACCAGGAAGGATACTATAGAAACAGTCGGTCTCGAGCAATCAATGCG
TAATCTAACACTCAAGCACGAAATTCTATGTCAACATCTGAGGTGTTCATCGGCGATTAGAGCGTGGTTCGGGACTGAAA
TATTTAGATATCCACATAGAATATGTGATTATTTGTTATCATGCCCTACAGCGGAAATCAGAATAGTTTTTATGAAGATT
ATAGTTTTCCTAGCACATTTTTCAATTGAAGATCCACCAGTGAGTAACGGCTACGGCTCGTGGTGCACGCGCGAGGAGGC
GCTCTCTCTGTCGGACCAGCTCGTGTGCAGCGTGCGGGCGCTCACCGCCCCGCACCCCGATGCACACGGCTCGCGACACT
TGCCGCTGCTTTATAACCTCTTCCTCACCTACGCCAACCTGGGACTCACGGAGAAACTACAACTACTCCGGTTAAAAATC
TTGGACATCATTCTCTCGGCCTGTATAGATGATACATCGTCCGGAGGAAAATACCAGTATCCAGAATCTGCTAAAGTACA
CCAGGTGGTGTGCGCTCTGCTGCGGTGCTGCGACGTTAGCGGGCGGTGTCAGTCGGCGGCGGAGGGCGCGGCGCCGTTGC
CCAACCCGTACGCCGAGCCGCCGCACGTGGCGCCCGCCGACCGACATGTCATGTCACCCCTCGTTGCCGACATACTCTAC
AACAGATCCGGGACGTACATGAAGAAACTGACAGAGGAGTGTTGCGGCTGCGAGGAAGGCATCCGTATACTACAGTTTCT
GTGCTGGGAAAACGCGGGCTGGTCTCGGCTGGCTCTGTCCGAGCTGTTGTGGCAGATGGCGTACGCGTACTGCCACGAGC
TGCGGCGCCACGCCGACGCGCTCACCGCGCTGCTGCTCATGGAGGACAGCTGGCAACAGCGACGCATACATAACGTTATC
AAGGGTGTGTCTGAGGAGAGGCCGGGACTGCTGGAGACGGCGGCCCGCTCGCGCGGACACTACCAGAAGCGTGCGTACGC
GTGCGTGAAGCTCGTGGTAGGCGTCATGTGCCGCACGCCGCTCGCAGTGCGCGCCGTGCACACGCAGGCCGACGCGCGGC
GCCGCTGGAGGCAGCTGCTCGCCTGGCTGCAGGACGAACTCGATCGCAAGTACGGTCCAGGATACGGGTCATACGGCACG
TGGTCTCCGCCAGGAACCTCAAATGAAACGTCCAGCGGATACTTCCTCGAACGCAGTAACTCTGCGAGGAAAACTCTAGA
AAAAGCATATCAGCTGTGTCCGGACGAAGATGAGGAAGAAGAAGAAGAAGGTCGGGAGGTTGCCGAAGGCTCCGGGTCGG
GCGAGCCTGGCGAGGACAGCGGCGACGAGGACGAACCACCAGACGACGAGCCCCGACGTCTGCAGCCCCACGCGCTCTCC
GGAGTCTGA
PEP:
>BGIBMGA007507-PA
MAFPEAKLKALEDKLSHPRWVVPVLPEQELEALLVAATELAAKGEDVHNAACQKFYTDALTISFTKILTDDAVSSWKNNI
QQCVRSNCEKLVKLCALKLDDPRFLHLLTMTLNPSNKFHMFNASRTSEGLSVTSNTTGTGQGPSQDIEIFARSHDHRTPR
GWLVHLINVFGQAGGFVKLRERFEEIMGFQKSDLNSSMNTEEKVLSEMMEKESDESKTSNTNCIEPVLVIGENSDSMTQS
RNDQPSSLEQSTTETRVTEVWHLLRPLGVCHDLLTAHTVTTYLLPVLECIPTLLESLSDEELKKEARALEMFRLKMILRL
LQMSSFNGKMSALNEINQLISTFSQQPKPEWLTPAVITNWIRENKVVDIVLRDSLHQPQYVDRLEKMLRFMIKENSLTTE
DLDAIWKAQHGKHEAIVKNLHDLLSKLAWDFTPDQLDHLFDCFKASWASSSKKQSDKLLEVIRRLAEDDKDGVMANKVLV
LFWNLAHSDEVCTEIIDVALANLIKILDYSCSQDRDAQKTLWLNKCVEELKTNEKWVLPALKMMKEICCLYEAGGGTGVR
PNLTRQELIDRLQTQHSLVILVTNSLTSYMDGVRNKLAVDGVIDWENWLPDGRYPHAAQVHERLSFLRFLLKDGQLWLCA
EQAKQIWVCLAERPAHLGDREACFRWFSKLMGEEPDLDPNINLHFFRRNIMTLPPNLLTHAGIKCFERQVITECDDDISA
RGIELLREVCTCVGPQLSPAMHHESFLTQCCARTQRLQREMEQQEDNPEVCTKMCRIIRAIQEYINECDRRFSSERQILP
IYRAGRGRQCTIIVRFNFQTGQRQIEDIELFSHSNETLHSLRASIQRRLKCASDSTIKLELYVNKLELFVNGELLDSSHD
KKILSQIPLRDKTLIVAKVYDGQVCGSGGCGSSNESSSDSSTSSPPLSPTPENALPGVLFAQGSWYLPFILELEHVGITK
LHGPLTEAAHLLSQICPAHKLTVRISYDFILIQFTTINIANNKLLLQMEKLTEALLCRDDTKLRDMLYGPSPPTVAYNIE
VLYSMVMPSSDTRLERSRNYQLACVKKAPLLVKCLSDKDFLKDAAPHTRRVGYLALVRLAKLILYTLGYLFEILAPDGSD
VSVDKDFRMDLTILREALTTIPNHSCEMIVKAVAEKLANSLGEQVVIAGEESDSVSSLVWWRVPTMATVRALFALGYSVA
QPVEMTSIVHPDDVTLVRECMEVVTICMALGGGRLDMLLNEPWWQDTALYLMIDCPNPQVRVSCAEQLLAMCAWGGGGGA
RSVLAALAGTALRLHRHAAHAMQFLQLLCRLVALAGPTDRTLEDLALEVDWLRTAKTNPDTLDDTLLEGHLNLTKELFAH
VPAQVKYQYGAHPDHKDSGLIKEITTEFLWPYSWAWHVNGSGNGGGGVGGSASDCRREPPAPLCRTPGAAAAAADLLLAL
VHGCVLNMAALARLLEQMFYSDKTMPLAEWEYMPCVGPRPPAGLVGLKNAGATCYMNSVLQQLYCVRAVRDTILTVQGAA
TDPNEDFSGESHHHSILENNIENNTDYNITILKQVQAIFAHLHCSKLQYYVPRGLWAHFRLQGEPVNLREQQDAVEFFMS
LVESLDEALKSLGQDQLMAKTMGGTYSDQKICKGCPHRYCKEEPFSVVSLDIRNMSRLQESLEAYVRGELLEGADAYHCD
KCNKKVVTVKRLCLNKLPPVLVIQLKRFEYDFEKVCAIKFNDYFEFPRDLDVEPYTAWGLARAEGDSTLWEGGEERTPET
NYQLSGIVVHSGQASGGHYYSYVLLRDNGSETGRWVKLDDGDVSECAMHDDEEMKAQCFGGEYMGEVYDPMLKRISYKRQ
KRWWNAYMLFYTRKDTIETVGLEQSMRNLTLKHEILCQHLRCSSAIRAWFGTEIFRYPHRICDYLLSCPTAEIRIVFMKI
IVFLAHFSIEDPPVSNGYGSWCTREEALSLSDQLVCSVRALTAPHPDAHGSRHLPLLYNLFLTYANLGLTEKLQLLRLKI
LDIILSACIDDTSSGGKYQYPESAKVHQVVCALLRCCDVSGRCQSAAEGAAPLPNPYAEPPHVAPADRHVMSPLVADILY
NRSGTYMKKLTEECCGCEEGIRILQFLCWENAGWSRLALSELLWQMAYAYCHELRRHADALTALLLMEDSWQQRRIHNVI
KGVSEERPGLLETAARSRGHYQKRAYACVKLVVGVMCRTPLAVRAVHTQADARRRWRQLLAWLQDELDRKYGPGYGSYGT
WSPPGTSNETSSGYFLERSNSARKTLEKAYQLCPDEDEEEEEEGREVAEGSGSGEPGEDSGDEDEPPDDEPRRLQPHALS
GV
Swiss-ProtProbable ubiquitin carboxyl-terminal hydrolase FAF
KEGG     K11840     
SUPERFAMILYSSF48371  ARM repeat superfamily     
PfamPF00443  UCH; Ubiquitin carboxyl-terminal hydrolase     
ProSiteProfilesPS50235  USP_3; Ubiquitin specific protease (USP) domain profile.     
CoilsCoil
ProSitePatternsPS00973  USP_2; Ubiquitin specific protease (USP) domain signature 2.     

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