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Gene detail [Fasta]

Species Bombyx mori
GeneBGIBMGA006669
Positionnscaf2855:127735..160226[GBrowse]
SilkDBhttp://www.silkdb.org/cgi-bin/gbrowse/silkdb/?name=BGIBMGA006669
sequence mRNA:
>BGIBMGA006669-TA
ATGCCTCAATGCGTCCACCGACACCGCCGCGCGCGCCGCTCTGAACTGTGGCCGCCTCCATATTGTCTAGTACATTTGTT
TCACTCGCACATCGTGCAGCTCGTCACCGCCAGATGTCACGCGCCTCTCACCGCTCCTCGCAACGCACCGCAAAACGCAC
CGCCAGTAGCTGTGGCATACTTCATAGGTTGTCTACCATTTGTTTTCGCCGCTCCCGCTTGCCGCGCCTCACGACGCACC
GCAATTCGCACCGCTCTCGGCTGTGGCCAAGGGATACAAGGTGAAGAAGGTGTGACTGCATTATCCACTGATGGTCCTCT
CCGCATGATAACACAAGGCCAAGAATTAACAGTAGATTACGACGAAAGAACTCTCTATGACATGGGGTTTAAAGATAATC
AGTTGGTGTTCGTGTCTGTGGGTGTTGGAGGCCGCAGCGGGTGGGGGGAGTGGGCCCTACCTCCCTCACACGCGCGTTAC
CCCACTCTGCTGCTACTGGAGCCCACTTGCTTCCACCAGCTCTTCTCACTGATGCAGGCTCTGGGCCAGATGAAAGAACC
AGGCCCTAACGGAGAACCCGTAGCTCACACCAAGGCACAACTACTCTCGCGTCGGGTGTGGGACATCCTGCAAGCGGTTC
CCCTGAACCCGACCCTTCTAGAAGCCTTCCAGAATCCCACCGAAAGCAAATTACCAGAACTGTTAGACCCCACCAGTCCA
CAGAAGCTTATGTATTCCTTGCATATAGTAGACAAGCTGAGTTCGACCAGTACCACGCCTACTAAGGAAACACCGTCTAA
TAAAGGAGATGAAGAAAACATATGTATCGAGACGTGGAACGATATTTTTATAAAAAAGGGAGGGTTGAGACTACTGTATG
ATATAATGATGTCTGGAGTGTTACAAAGGAGCGATGACAGTGAGTGGCGTCAGGATTGCTTAGCCTTACTCCTTCAACTG
CTTTGCCGAATCGGAACTCTTCCATCGTCAGATCCTTCGCAGACGCCCAAGCTGCATCCCGCACTTCTATCGTTGATGAG
CATAGAGGAAACCACCGAGAGACTCATCTCCATACTATCGGAAGCTGCAACCGTGAAAGAGCCTACAACATACAAAACCG
GATTCTGGGGACGTGCACAGGTCGTCCAGCACGCGATGAGGATGTGCGTGTGGTGGGCTCGAGGGGGAGGCGATCCGGTG
TCGCTGGCCTGGGCTCTGAGGAAAACTGCTCCGAGGCTACTGCTCGATGATGCTGATCCAGCTGTCCGTCGCGAGGCGGG
CAGCGCGCTGTACCGGCTGTGCGCGGGCGCGGCGTGCGTGCAGGCGCCCGTGCTGCAGCTGCTGCTGTTGCAGCTGCCCC
GCGCCGCCGACATGAGGCCCCACCACCACCACCCGCACCATCACCATCACGAGATGGGTCATCACCACACGGAAGAAGGC
AAAGAGCCATACGGCCCCGCTTGCAGGGATTATTTTTGGCTAGTTTGCAGGCTCATTGACGGGCTGCCTGAAGACTATTT
CAAAGAGGGGGCAACATCAGACGACAGCGGGGCTCCTGATCTGAACGAGCTCTGTGAACAGATCCGAGCTTCTTTAGAAA
AACGTGAGATCATCGAGAAGCGGACGGAGCCGTGTACTCCTGACGACGGACTGTACGGACAGCTGAGTCTACTCACGCAT
TTGCTGAAGCATCCACTCAGATTCAAGACTTCAGAACAAGGCACTAGGACTCTTGAAATGATATTCGGATTTCTATTTGA
CGTTCCGAACCCGGAGAACCGGAATCTGCCGAAATGTAAGTCCCAGAAGTCGCGGGCGGCGGCGTACGATCTCCTGGTGG
AGCTGGTGAAGGGCGCGCCCGACAACTACATGGTGCTGCATCACAAGCTGATGGAACACCACAAACCTGGTCCGTCGTCG
TCGTACCCGTGGGACTACTGGCCGGCGGAGGAGTCGCGCTCGGAGTGCGGGTTCGTGGGGCTGACGAACCTGGGCGCCAC
GTGCTACATGGCGTCCTGCATGCAGCACCTGTACATGATGCCGCCAGCGCGCGCCGCCGTGCTGCGCGCAGACCCCGCCG
CCTCCCGCCACGCGCCCACGCTGCACGAGATGCAGCGCATGTTCGCCTACCTCATGGAAAGTGAACGTAAAGCGTACAAC
CCTCGCAGCTTCTGCAAGGTCTACCAGATGGATCACCAGCCGTTGAACACGGGCGAACAGAAGGACATGGCCGAGTTCTT
TATAGACCTCGTCTCTAAGCTCGAGGAGATGACGCCCGAGTTGAAGAAACTGGTCAAGACGCTCTTCTGCGGTGTGCTCA
GCAACAATGTCGTGTCACTCGACTGTCCGCACGTGTCCCGCACTCTGGAGGAGTTCTACACGGTGCGGTGTCAGGTGGCC
GACATGCGCAACCTGCACCAGAGTCTGGACGAGGTCACGGTGAAGGACACGCTGGAGGGCGACAACTGCTACACGTGCTC
ACAGTGCTCCGCTAAAGTGCGAGCCGAGAAACGGGCATGTTTCAAGAAATTACCCCGGATACTATGTTTCAACACCATGC
GTTACACATTCAACATGCTGACGATGCTCAAAGAGAAAGTGAACACCCACTTCTCGTTCCCGATGCGGCTCGACATGTCG
GGATACGTCGAGAAACATCTTATGCCGGCTCAATACCAAGGCAAGAAATCGGCTGAGTTAAGGAAAGAAGGGGAAGCCAG
CCCGAATGGTGAAGTCGAAGATAATTCTGAATTCGAGGAGCACTATGAGTACGAGCTGATAGGCGTGACCGTACACACGG
GCACGGCGGACGGCGGCCACTACTATTCCTTCATCCGCGACCGGGAGCACGAGCACCACGACCGCTGGCTGCTCTTCAAC
GACGCCGAGGTCAAGCCCTTCGACCCGGCGCACATCGCGGCCGAGTGCTTCGGAGGAGAGATGACGAGTAAAACATATGA
CTCGGTTACGGACAAGTTCATGGACTTCTCCTTCGAGAAGACAAACAGCGCGTACATGCTGTTCTACGAGTGGAGTCCTC
CCAAAGCACAGCGCGGCTCCGATTGTGGACAACAGGAAGAGGCACAGTCCTCGACGGCCGAGGAGTTGAGTCCGTGTGCT
TCGGTGGAACGAAGAAGCGGTGAAGCGCCCACCATCAAACTACCCCCCGATCTGCTCAAATGGATATGGGACGACAACAT
GCAGTTCCTGCACGATAAGAACATATTTCAGCACGCTTATTTTACGTTCATGGGTCAGATGTGTAGTTCGGTACCTCAAA
CATTAATAACACTGCATCCGGAGATAACGGAAGTAGCAGCAAGATTGTCAACGTCGTTCTTTATTGAGACATTTATACAT
GCCAAGGAGAAGCCGACAATGGTGTCGTGGGTGGAATTAGTGACGAAACAATATAATGCTTCGGCGGCAGCTTCGGAATG
GTTCCTGGGTCACATGGCGGACGACACCTGGTGGCCGATGCAAGTTTTAATAAAATGTCCGAATCAAATGGTCCGGCAAA
TGTTTCAACGGCTTTGTATGCACGTCATACAGAGACTCAGATCTAGTCATTGCGCCCTGTACCTCCAGGGTATTGAAGAC
GAAGATGACAGTAAACTGGGGGAGGCGAGCTGTGTTACTAGGTTTATAAGGATGTTGTTGTCTTTGATGGAGAACGGTGC
TCGGGCACATTTACGGCATCTGACGGAGTACTTCAGTTTGTTGTACGAGTTCAGTAAGATGGGAGAGGAGGAAGGGAAGT
TTCTGTTGCGGATTAATGCCATCAGCAGCATGGTCAACTTTTATTTGGGGCAAAACGGAAATTCACTGGAATCGCCGACG
GAGGAGGCCGGGGGCAGCGGCGCTGCGGAGAGCGGGGGGGACAAGCTGCGGCCCGGCGCGCTCGACAAGATGGTCGCGCT
CGTCACCGGGCTCGTCGAGCGCTCGCGTGACGTCGGCGGACACCTCGTCCTGCGGGAGCCCGACGCCAAGGCGCTGCTGC
ACGCCAAGGGATTTCCGTTTATATATCAACAAACTCGGGATTGCCTCAATCTGCAACAGACGCGGTCTTTGATTTTCGCC
TTGTGTCGATTCAACGAGCCGCTCGCGCAGAAGATTGTCGGTACAATCTTTCAGGCAATAGCGAAGCACTCTGAGTGCGG
CGAGGTGTGTCCGCACGCCGCGCTGGAGTGGCTGGCGCTGCAAGTGCCCCGCAACAAGGCGGCGCACGCGTGGGCGCTGC
GCACCGCCGAGCGCTGGGTGGAGCCGCAGCTGCTGGCGGCGGGCGCGGCGCGGGTGCGGGCGGCCGCGGCGCTGCTGCTG
GTGGCGCTGGTCCCCTCACAGCACTTCCGCGCGGGGTACGCACGGGCGCGACCTCCACCCGCCGCGACGATGCACACCAA
GCTGCCAGATACTGCGCACCACACGCTGCATCAGGTGTACAGTATGTTGCTTGGAAAATTGAAAGCCGCTCGTAAATACA
TCGACATTGCCGTTCATGGAACTATGAAGCTGACAGCCTATTTCGGCGTCATGTCGTACTGCGTCGTTAGCAGAGTGGAA
AAATTAATGTTCGGTCAGTACTTTAACGATCTCTGTGATCTGTACCATCCTGGGTTATCGGAGCCGTCGGTAGCAGTGCA
CCACAACAAGCAAGCTCTGATAACGTTCTGGCACGCCGTCTCCGTGGACTGCCCCGAGAACGTACAGCTGGCGGTCTCTA
ACCCGAGGGTCATCAAACACATCGCCTTCAATTATATACTTGCGGACCATGAGGACGGTGAAGTGGTGGCGTACAACCGC
GCCATGCTGCCGCCGTACTACGCGCTGCTGCGGCTGTGCTGTCGCCGGTCAGCGTCGTTCGCGCGCATGCTGGCTCAGCA
TCAGAACGTGCACTGGGCCTTCAGGAATATAGCGCCTCACGCTCATTTATATCCCGGGGCGGCCGACGAACTGCTCAGAT
TAGCACGGATACTGGCGGCGCGCGGCGGCAACATTGCGGGGACCATGGTGGCGAACGTCGCCGGGACCATGGTCGCTAAC
GTCACCGGCACTATGGTCACCAACGTCACCGGCACGGTCACCAGTAACGGCAGCACGATCACGACAACGAACAGCAACAG
CAGTAACAGCAGCGGCAACGGCAGCGAGAACAACAGCGGCAGCGAGACCCCAGACGGCAGAGAAGCGGCCGCTTTCAGAC
GAAGCACGCTCGCTGCCTATCTACAGGGTTTGAACGGGAGGACGTGTTGGACGACGTTAATATCGGCGTTCTGTACTTTA
GTTGAAAACGAAGACGACAGATTATACGTAGTCTACAATGGAGGATTACAAATGACCTTTGAAGCCCTGCACAGTTTGCA
CGCCGTGTACGTGGAGGGGGGCGGCGCGGGCGGGTCGGGGGCGGCGGCGGGCGCGGGCGGCGCGGTGCGTGCGGAGCTGG
GCGCGGCGCTGCGCTGGGCGCGCTCGCTGTGCCGCACGCTGCGCACGCGCCGCGACGCCAAGGAGGCGCGCGCCCTGCTG
CTCGCCTGCAAGGACTGGCCCGAGTGTGCGCGGCGTCTGCTCACCATGCTCAACTTGCACCATCGGTTCGATCATCTTCG
GGAAGCCGCGCTAGGTGATCACCGCAAAATCATAATAATATACTTATTGTTTATAAAATGTAATCTATACTAG
PEP:
>BGIBMGA006669-PA
MPQCVHRHRRARRSELWPPPYCLVHLFHSHIVQLVTARCHAPLTAPRNAPQNAPPVAVAYFIGCLPFVFAAPACRASRRT
AIRTALGCGQGIQGEEGVTALSTDGPLRMITQGQELTVDYDERTLYDMGFKDNQLVFVSVGVGGRSGWGEWALPPSHARY
PTLLLLEPTCFHQLFSLMQALGQMKEPGPNGEPVAHTKAQLLSRRVWDILQAVPLNPTLLEAFQNPTESKLPELLDPTSP
QKLMYSLHIVDKLSSTSTTPTKETPSNKGDEENICIETWNDIFIKKGGLRLLYDIMMSGVLQRSDDSEWRQDCLALLLQL
LCRIGTLPSSDPSQTPKLHPALLSLMSIEETTERLISILSEAATVKEPTTYKTGFWGRAQVVQHAMRMCVWWARGGGDPV
SLAWALRKTAPRLLLDDADPAVRREAGSALYRLCAGAACVQAPVLQLLLLQLPRAADMRPHHHHPHHHHHEMGHHHTEEG
KEPYGPACRDYFWLVCRLIDGLPEDYFKEGATSDDSGAPDLNELCEQIRASLEKREIIEKRTEPCTPDDGLYGQLSLLTH
LLKHPLRFKTSEQGTRTLEMIFGFLFDVPNPENRNLPKCKSQKSRAAAYDLLVELVKGAPDNYMVLHHKLMEHHKPGPSS
SYPWDYWPAEESRSECGFVGLTNLGATCYMASCMQHLYMMPPARAAVLRADPAASRHAPTLHEMQRMFAYLMESERKAYN
PRSFCKVYQMDHQPLNTGEQKDMAEFFIDLVSKLEEMTPELKKLVKTLFCGVLSNNVVSLDCPHVSRTLEEFYTVRCQVA
DMRNLHQSLDEVTVKDTLEGDNCYTCSQCSAKVRAEKRACFKKLPRILCFNTMRYTFNMLTMLKEKVNTHFSFPMRLDMS
GYVEKHLMPAQYQGKKSAELRKEGEASPNGEVEDNSEFEEHYEYELIGVTVHTGTADGGHYYSFIRDREHEHHDRWLLFN
DAEVKPFDPAHIAAECFGGEMTSKTYDSVTDKFMDFSFEKTNSAYMLFYEWSPPKAQRGSDCGQQEEAQSSTAEELSPCA
SVERRSGEAPTIKLPPDLLKWIWDDNMQFLHDKNIFQHAYFTFMGQMCSSVPQTLITLHPEITEVAARLSTSFFIETFIH
AKEKPTMVSWVELVTKQYNASAAASEWFLGHMADDTWWPMQVLIKCPNQMVRQMFQRLCMHVIQRLRSSHCALYLQGIED
EDDSKLGEASCVTRFIRMLLSLMENGARAHLRHLTEYFSLLYEFSKMGEEEGKFLLRINAISSMVNFYLGQNGNSLESPT
EEAGGSGAAESGGDKLRPGALDKMVALVTGLVERSRDVGGHLVLREPDAKALLHAKGFPFIYQQTRDCLNLQQTRSLIFA
LCRFNEPLAQKIVGTIFQAIAKHSECGEVCPHAALEWLALQVPRNKAAHAWALRTAERWVEPQLLAAGAARVRAAAALLL
VALVPSQHFRAGYARARPPPAATMHTKLPDTAHHTLHQVYSMLLGKLKAARKYIDIAVHGTMKLTAYFGVMSYCVVSRVE
KLMFGQYFNDLCDLYHPGLSEPSVAVHHNKQALITFWHAVSVDCPENVQLAVSNPRVIKHIAFNYILADHEDGEVVAYNR
AMLPPYYALLRLCCRRSASFARMLAQHQNVHWAFRNIAPHAHLYPGAADELLRLARILAARGGNIAGTMVANVAGTMVAN
VTGTMVTNVTGTVTSNGSTITTTNSNSSNSSGNGSENNSGSETPDGREAAAFRRSTLAAYLQGLNGRTCWTTLISAFCTL
VENEDDRLYVVYNGGLQMTFEALHSLHAVYVEGGGAGGSGAAAGAGGAVRAELGAALRWARSLCRTLRTRRDAKEARALL
LACKDWPECARRLLTMLNLHHRFDHLREAALGDHRKIIIIYLLFIKCNLY
Swiss-ProtUbiquitin carboxyl-terminal hydrolase 34
KEGG     K11853     
SUPERFAMILYSSF54001  Cysteine proteinases superfamily     
Gene3DG3DSA:2.20.210.10     
PfamPF00443  UCH; Ubiquitin carboxyl-terminal hydrolase     
ProSiteProfilesPS50235  USP_3; Ubiquitin specific protease (USP) domain profile.     
CoilsCoil
ProSitePatternsPS00972  USP_1; Ubiquitin specific protease (USP) domain signature 1.     

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