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Gene detail [Fasta]

Species Bombyx mori
GeneBGIBMGA004976
Positionnscaf2822:857204..881268[GBrowse]
SilkDBhttp://www.silkdb.org/cgi-bin/gbrowse/silkdb/?name=BGIBMGA004976
sequence mRNA:
>BGIBMGA004976-TA
ATGGTCAACAAGAAAGCATTTAGGTGCAATGAACAGGGTGATGATCCACCCTACTTGCCAGTGGGGACTGATGTTAGTGC
AAAATACAAGGGTGCATTCTGTGAGGCTAAAATAAAAAAAGTTGTAAGGAATATTAAATGCAAAGTTACACTTAAAGCTG
GTGGAGGAACAATTACTGTGAATGATGATGTAATAAAAGGTACATTGAGGATTGGAAGTACTGTAGAAGTGAAACAGGAT
CCGAAAAAAGATGCAATGGAAGCTGTCATTACTAAAATACAGGATTGCAGTCAATATACTGTTGTATTTGATGATGGTGA
CATCACAACATTGAGGCGATCAGCGCTTTGCCTGAAGAGTGGAAGGCATTTCAATGAAAGTGAGACTTTAGATCAATTGC
CATTGACACACCCTGAACACTTTTCTACCCCAGTCATAGCAGGACGACGTGGCAGAAGAGGACGCGCCCAGTCAGATGAT
AGTGAAGGCGAAGGTACGAGTCGTCCCGTGAAGGCGGACAGTGCCGAGCGCGAACCGCACGTGGGTCGCGTGGTGCTCGT
AGAGGCGGCCAGTGGCGCGGAGAGGCGCCGACCGCACCAGCCCGCCTTCCCAGCGCTGGTCGTCGCGCCCACGGCACAGA
TCAAGGTCAAGGAGGATTATTTAGTACGCTCCTTCAAAGATGGACGATATTACACAGTACCCAAAAAAGAAGCACGCGAG
TTCCGTAAGGGCAGCGCACCGCTGGAATGGGCAGGAGTTGAAGCCGCTCTACAATATTTGAACCAAGGTGTGCTGCCTCC
GCATTGGGATCGAGACACGCTCTTCAACGAACCCCGAAATACTTCTGATGATAGTTCCGATGATGAGCCAAGAGAAGAAA
AAGATCATTTCGTGGCTCAACTGTATAAGTTTATGGATGACCGTGGCACACCGCTCAATCGGAATCCGACTATAGCCAAC
AAAGATATTGATTTATATAGACTATTTCGGGTCGTTCAAAAACTAGGAGGCTACAACAGGGTCACTAATCAAAATCAATG
GAAAACTATTGCTGACAAAATGGGCTTTCATCCGGTGACGAATAGTATAACGAATCTCTGCAAACAGGCATATAAAAAAT
TCCTGCACAGCTTCGAAGATTTCTACCGAAAGCTGGGGGTGACGTTAGTGGCGCACCCGCGCGGCGCACGCACTCCGCCC
GCCGGTAGATCTCTCATACGAGACAAAGATAAGCAGCCTCTCACTTCGTCCTCCGCTTCAAGCACACCGACAGGCACTCC
CAGTCAGCGCGGCAAAGACAAAGATTCTGACAAGAGCGAGACAGACAAAAGTGAAAAGAGCGAGAAAGAAGAAAAAACAG
AGAAAACGAAAGAAAAACCTCGGGCTAGTGACGAAGAGGACAGCGCCGACAATCAACCGCTCGTAGTTGCCGTGGCTCCA
AAGATCGAAAAGGATAAAGAAAAAGATAAAGAGAAGGAGAAAGAAAAGGATAAAGAGAAAGAAAAGGAAAAGGAGAGAGA
AAAAGAGAAAGAAAAGGAAAGAGAAAAAGAGAAGGAGAAAGAAAAGGAAAAAGAGAAAGAGAAAGAAAGAGAAAAGGAAA
AAGAAAAGGAGAAAGAGATAGAGAAAGAGAAAGAAGATAGGAAAGAAAAAGAAAAAGTGAAAGATAAAGAGAAGGAGAAA
GAAAAGGAAAAAGATAAAGAACGTGAAAAATCAACGTCGACTACCACGAGCGAAGAGAAAGTGCTAGTGAAACCACGTTC
GCAATCTAAAGGACGTTCCTCGATGCCGCCTTCTAAACCAGACTCTCACGACAAGCGGACACCGAAGAGACGCCCACTCT
CCTCGAAAAGCGAGAGCGCAGGCTCAAGCACTTCGAGAGCCTCACGCCGACCTCACGTCTCAACGGACAGTGATAGCTCC
GGCCGTGCTTCTAGGCCATCCACTAATGAGCCGATGCATACGCGCGTGTCGAACGTGAAAGCTCAAGTCGGTGACAAACT
GAAAGTTTATTATGGACCCACACAGTCTGAATCTAAGGTCACGTACGAGGCTAAGGTAATAGAAATTTCGTCTGAGGGTA
TGTTGAGAGTACACTATACCGGCTGGAACACTCGCTACGACGAGTGGATCAAACCGCAGAGGATTGCACTCAACGTTACA
CAGCACGAACAGCGCAACAAAAAGGGTACCGGGATGAGTAGACGTGTCCGTGCTAAGATGAATGAAGAGTCATCAGCTCG
GTCTGATTCCGACAGTGACTCGGATAGCGACGTCGATCTGAAGAGACCACCAAAAAAACTGGATGAAAAAGGCCCGCCTT
CTAAAATTTTACCACGACCGAAAGAAGCAAAGACGGGTGAGAGCAGTGGCTCAAATAAACCACGCAAGAGACCCGTACGT
ACAGTCTCTACGCCGACTAATCTTTCTCCAAGCAAGAAACCACGACCGATGCCCACCACTTGCCATCAGGGACGAGACTT
CGATCTGAACGAAATCAGATCGGAGCTAAAAGGACTACATTCAGTCAAACAGGACCACGATGAATCATCATTGAAACAAG
ATCCACATGACAAAACATCTAGGCTCATGCTTCCGGCAGCTACGATGTCGGCCGCCCCCGCGGAACCCCCGCAACCCGAT
AAACAAGCCGAGGACGTGTACGAGTTCAAAGAACCAGAACCATTCGAACTGGAGCTGCACGACGAAAAGAAAAAAAGGAC
TCATCGAATATTCGACGATATTTCCCCCAGTAAATACACATCAACGTTATCGAAATCGTTGAGTGAAGAAATCTCCGAAG
ATCCCTTAAGACCGCGTCCTTCGACTTTAAGATCACCCTCGCTGTCGCCGTTCAGAGATTTCGGAGGGACTCGTGCTCTC
GAGCCAGGTAGACAAAGTCCCGAAGAAGACCCTAAAGTATGTCTATTCGGTTTGGACGACGACTCATTCCAAGGCGATGG
CAGTTCGGGCCCCACTTTCGAAGGGTTCACTCCTGCTAAAAATCAAGAGACTTACTCTAAGAAGAGTAAAGTGTCTAAGT
TAAGAGAACTCATCGACGATTCGCCGGAAAGTCCGGCTGATGACGAACATTCTTCAGAGGATGAGCAAGACTTGATGGTA
AAAGGCGAAAAAGCGGTAAGTGAACCAAGCCCTGCTGCTCCCCAAGTGGAAACTGAGAAAATAACGGAAAACGTTAAAGA
ATGTGTCGCTTCAAAGGAATTAGTGACACAAATAATACTGGAACCAATAATTGAAACGAATACAGAAACTAAATACGTTA
CAGAAGAAGCCGTAAAGCAAAAAGAAGTACCGATGGAGATAATCATAGCGCCCGAACGCCCAAAAACACCGCCACAGCAA
AGAAAAGAAATACATAAAGTTAACCTACTCTCCGTCCCCGTATCCATTTCTAATGTCCAAATGAATGTGACGCTTACTGT
TGCTAATCCTGTTCTGAAACAAGAACCGGTCAAAGAATCGTCACTTAAATTGCTTACGGTTCCAAAAATAGTAACGGAAC
CTAAAGAAAACATTCCGCAAATGAAGATTGAACAAAACATGGACCCAGAACCTGTAGTTTCGAAGTTTGAACCTCCCTCG
AGCCCTCTGATTGACACAGAAGAAGATAAGTCGGAACCCGACAGTCCGGCGAGAATTGATGTCATCCCCGAACCGCCCCC
TGGATTCTTATTACAGTCCGAGGGACCGAAGATAGCGGAGAAATTGCTTAAAGCCATCAACAGTGCCAAGAGGCTCTCGA
TGTCCCCGCCACCCACGGACGATAGATCGGATGCGTCCAAAACGGAACCCAATAAATTTAACAAACCCGAGATAAAAGTT
TCTTCCCAATCACCAGAACTGAAAACGATCTCATCAAAATCTGACACGGTCAAGCCGTTAGTTAAGTCGGAACTCAAGAA
AGTCCGAACTCCAGAAATCAGCGAGTGTATATTCGGCGAGCCGTCGAACTTAACGGATGCGAAGCGAGACGCGACCGACG
TTAAGAAAGTTAGACCCAAAGACGAAATCAGGAAAGAGGTTTTATCTCCACGCTTACAGAGCCCATTAAACATACTTGAG
CGGCGGCGTAGTGTTGCCGACTTACCATTAGCAGTGCCCGCTCAGAAGAACAATAAAGTTCTCAGCGACACGATACAAAA
GTTGTCGAGCCAGATCAACCAGTCGGCGGCCGCTGCCGTCCCCTTGCCGCTGCCACCGTTCCCGCAAGCCGACAGGAGCG
AATCCAGCGATTCCGACGATTCCGATCGGAGGTTAATAATCGACAAAGTGGAAGAGTGGGGCGGCAACAGTTGCGAGACG
TCGCGGGCGAGCGGTGCGGCCGCCCTGGCGAGCCTACACGCCGGGAAGTCGGCCGGCGAGTGGAGCGCCGGAGAGTCCCT
GCTCATGCTCGAAGACGCTTGCAAGAACGAAAGGAAGCATAAGGATCGTCGCGGCGAAGGTCCGTCCCGTCCGATGGTGG
CAGCGGGAGGGGGCGGCGCGGCGGGGGCGGGGGGTCCGGCTGCGGGCGAGGCGCCGGGCTGGGGACGCCGACACGCGCTC
ATCGACAACACGCCGCCCACCACGCCCGACAGCAGCCTCGACATGTCGCCACACAGGGACCGTCGTATGTCTGAACGCGA
CAGTCCGTCGGAACGCAAAGACGACGATGATGAAGTACGACCGATTGATGCGTCACTGGATATTGAAAAACCACACGAGT
CGTCAGCATGCGGGCGGTCCCGCAAGGCGTCAGAGAGCTCCGGGGCGGGCGCGGGGGCGGGGCGGGGGCGCAGGCGGCGC
CGCGACACCGACGAGCTCGGCGCGCACCACCCGCCGCACAAGTACAACTTCTATGTCGAACTTGATCCATCATGGGATTC
TCAGACGCGTATAAACGTTCTTACAACACGACTAACAGATTTGCGTAAAACCTATCATTCGGTGAAGGCGGAACTAGCCG
CAATCGATCGACGTCGCAAGAAACTACGTCGGAAGGAGAGAGAAGCCGTAAAAGCTGCTAAAGCCGCGTGTTCGTGA
PEP:
>BGIBMGA004976-PA
MVNKKAFRCNEQGDDPPYLPVGTDVSAKYKGAFCEAKIKKVVRNIKCKVTLKAGGGTITVNDDVIKGTLRIGSTVEVKQD
PKKDAMEAVITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQLPLTHPEHFSTPVIAGRRGRRGRAQSDD
SEGEGTSRPVKADSAEREPHVGRVVLVEAASGAERRRPHQPAFPALVVAPTAQIKVKEDYLVRSFKDGRYYTVPKKEARE
FRKGSAPLEWAGVEAALQYLNQGVLPPHWDRDTLFNEPRNTSDDSSDDEPREEKDHFVAQLYKFMDDRGTPLNRNPTIAN
KDIDLYRLFRVVQKLGGYNRVTNQNQWKTIADKMGFHPVTNSITNLCKQAYKKFLHSFEDFYRKLGVTLVAHPRGARTPP
AGRSLIRDKDKQPLTSSSASSTPTGTPSQRGKDKDSDKSETDKSEKSEKEEKTEKTKEKPRASDEEDSADNQPLVVAVAP
KIEKDKEKDKEKEKEKDKEKEKEKEREKEKEKEREKEKEKEKEKEKEKEREKEKEKEKEIEKEKEDRKEKEKVKDKEKEK
EKEKDKEREKSTSTTTSEEKVLVKPRSQSKGRSSMPPSKPDSHDKRTPKRRPLSSKSESAGSSTSRASRRPHVSTDSDSS
GRASRPSTNEPMHTRVSNVKAQVGDKLKVYYGPTQSESKVTYEAKVIEISSEGMLRVHYTGWNTRYDEWIKPQRIALNVT
QHEQRNKKGTGMSRRVRAKMNEESSARSDSDSDSDSDVDLKRPPKKLDEKGPPSKILPRPKEAKTGESSGSNKPRKRPVR
TVSTPTNLSPSKKPRPMPTTCHQGRDFDLNEIRSELKGLHSVKQDHDESSLKQDPHDKTSRLMLPAATMSAAPAEPPQPD
KQAEDVYEFKEPEPFELELHDEKKKRTHRIFDDISPSKYTSTLSKSLSEEISEDPLRPRPSTLRSPSLSPFRDFGGTRAL
EPGRQSPEEDPKVCLFGLDDDSFQGDGSSGPTFEGFTPAKNQETYSKKSKVSKLRELIDDSPESPADDEHSSEDEQDLMV
KGEKAVSEPSPAAPQVETEKITENVKECVASKELVTQIILEPIIETNTETKYVTEEAVKQKEVPMEIIIAPERPKTPPQQ
RKEIHKVNLLSVPVSISNVQMNVTLTVANPVLKQEPVKESSLKLLTVPKIVTEPKENIPQMKIEQNMDPEPVVSKFEPPS
SPLIDTEEDKSEPDSPARIDVIPEPPPGFLLQSEGPKIAEKLLKAINSAKRLSMSPPPTDDRSDASKTEPNKFNKPEIKV
SSQSPELKTISSKSDTVKPLVKSELKKVRTPEISECIFGEPSNLTDAKRDATDVKKVRPKDEIRKEVLSPRLQSPLNILE
RRRSVADLPLAVPAQKNNKVLSDTIQKLSSQINQSAAAAVPLPLPPFPQADRSESSDSDDSDRRLIIDKVEEWGGNSCET
SRASGAAALASLHAGKSAGEWSAGESLLMLEDACKNERKHKDRRGEGPSRPMVAAGGGGAAGAGGPAAGEAPGWGRRHAL
IDNTPPTTPDSSLDMSPHRDRRMSERDSPSERKDDDDEVRPIDASLDIEKPHESSACGRSRKASESSGAGAGAGRGRRRR
RDTDELGAHHPPHKYNFYVELDPSWDSQTRINVLTTRLTDLRKTYHSVKAELAAIDRRRKKLRRKEREAVKAAKAACS
Swiss-ProtAT-rich interactive domain-containing protein 4B
KEGG     K07874  RAB1A; Ras-related protein Rab-1A     
SUPERFAMILYSSF63748  Tudor/PWWP/MBT superfamily     
Gene3DG3DSA:2.30.30.270     
PfamPF11717  Tudor-knot; RNA binding activity-knot of a chromodomain      
SMARTSM00501     
ProSiteProfilesPS51011  ARID; ARID domain profile.     
CoilsCoil

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