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Gene detail [Fasta]

Species Bombyx mori
GeneBGIBMGA004592
Positionnscaf2800:1326524..1347899[GBrowse]
SilkDBhttp://www.silkdb.org/cgi-bin/gbrowse/silkdb/?name=BGIBMGA004592
sequence mRNA:
>BGIBMGA004592-TA
ATGGTAGCTCATATATCCCAACAACTTTCCGAGTTTAAAACCGCTCCCATTATCGGAGTCACTTTGAAGATAATGGTGAT
AGACGAAAACGAAGCCCGCCTCCGTGTCCGATACCCGCTGAACTGCGAGAAACGACGAAACTACAAATTCGATATTGCCG
CAGTTGGTTGCGACGGCTCCTATTCCAACACTGTCCCCGTTCACATAACGGTGACAGACGTGAACGAATACGCTCCAGTC
TTCAGTCAATCCGCGTACGTGAAGACCGTCGACGAGGGACGCATTTACGATGAGATCCTTCGCGTCGAAGCCACTGATAA
GGATTGCACTCCGCGATATGGTGACGTGTGCAAGTACGAGATCCTTACGGACAGGAGCCAACCGTTTACTATCAACGTTG
AAGGTGTGATCAGGAACACTGAGCCACTTGACTACGAGAAGTCTCACAACCACATCCTGTCGGTTGTCGCCTACGATTGC
GGTATGATGCAGTCGACGCCTGTTATGGTCACAATCAAAGTTAACAAGCCCTGCAGAGCGGGATGGAAAGGAGTGGCGGA
ACGTGTAGATTACGCGCCGGGAACAGGTCCACTGGCCTTATTCCCCGCCGCACGTCTGGAGACCTGTTCTTCAGACGAGC
GTTGCCCTGGAGTCACCAGGATCCAAGCTGCGGTCTCCTTGCAGGCCTCGCGCGTCGGCAGCGGCTGCGACAGGGATACT
TATTCGCTGCATTCTCAGCGTACCATATGCGGACTCGACCCGAAGACAATTGACCTGCTACCGAGTCCTGGAGCCGGTAA
TGAATGGGCGAAATCATTGAAGCCCGACTCAGGTCGTGACGGCGAGCAGATGTTCGAATTCGACGGCGAAACAACATCGG
CCATAGTTCCAGAGTCGGTGTTGCCTCACTCGCTGACCAGCAGCTTCTCAATCTCGACGTGGATGCGTCACGCCCCTCCC
GCTGACGGCGACAAGCACAGAAAGGAACACGTTCTGTGCCTTGCCGACGACCACAAAATGAATCGCCACCACTACGCTTT
GTTCGTCCGTAACTGCCGTTTGATCCTGCTCTTGCGCCGGGACTTCGGCGAGGGAGACCTCAACATATTCCGTCCTGCCG
AGTGGAGGTGGAAGATACCCGAGGTTTGCGACAACGAATGGCATCACTACGCTCTGAACATCCGCTTCCCCAACGTGGAC
TTGTTTATTGACGGCGAACCTTACCGCTCGCTCGACGGTAAAGGGCCCGAAGTTATTGACGACTGGCCCCTGCACCCCGC
GCACGGTGTCAACACCACCCTCGTCGTCGGCGCTTGTTGGCAAGGCACCGAGAAGGATATGAAGCACCACCTTCGCGGCT
GGCTGGCGGGGCTGGGCGTGCTGCGTGGCGCCGCACAGCCCTCACACGCGCTCTCCTGTCTGGCTCGCTGCCGGGAGGGA
CTCAGTCTGGCACCGGACCTATGTAACTACTCACAAGTCTATCAATACATTATCGCTAAATCCCGTCAAAGGCATACGAA
CATGAAGCTCTCCCTTTTAATGCAGCAGGATCTGAAGTCGGTGTCAGTGGAGGGCGACGGAGTGGCGGACGTGGAGACAT
TGCTGCGCCGTGTCGCGTATGGAGACGCGCGGGCCTTCCCCACTCCGGGCAGGAGGAATGTGCACGTGGCCACCACCATC
ACCTGCGACAACGGGCGCATCATCAAGGCCCGCCCGGCGGAGTCTTACATCATGGTGCTGGCGCCGCAGACGCCCAGCAT
CCTCCTGAACGGCAATGAGAATCAGAAGCTGGACTCGTGCGTGGTGTCGGTGTACCCGGCTCTGAACCCGGACCACGAGG
CTTTGTCGCTGCGCGCGGCCGCAGACCTGCCGTTGCGGTACGACATCCGCGCGGCCGTCACTCGGGACGGCGTCATCCTC
ACCGGCGCCGACACCGTCCACAACTACCAGAAGGTGCTTCGCGAAATCGAGTACAGCAACAAGAAGCCGGCCTACTACCT
GAACCGCGTGTTCAAGCTGACCTGCTCAGAGCTCAACGGTCGATTCACGAGCAACGAATATGTACAAACCTTAACTGTGG
TCCACCCTCATATGTCGGCCGCTAACGAGGTGGCCTCTCGGGAGCTACCCAGCGGCATCGCGGACAAGGCTGACGTCGCC
AGAGAATCAGTGCCGGACCGCGGCCACGCCCACGGGCACGCCGTGGCGCCGCGCGTGTACGCCGCGCACGCACAGCGCGA
CGCGCACGCAGCCGACGTGCCCGCGCCCCGCCTCATCGACCTGCGCCCCGAGCAGAGCGCCACGAACGGCACGAAACTGA
CGCTTTTTTGTGACTGTGCAGACCACGTGGCTCTGCTGATCGGCGTGGTGGCCGTGGGAGTGGTGGTGCTGGCGGCAGGA
GTGGGCGTGGCGCGCACCCGACGCTCCCCCCGCGCGCCCGCCGCGCCCCGCGCTCGACACGTCGACTCCGAGATGGCGTG
GGACGACTCCGCCCTCACCATCACCGTCAACCCCATGGAAGAGAGCGTCCCATCCTGCGGCACGCACGTGAACGCGGCGG
ACAGCTCGGACGGCGAGTCCTGCTCCGACTCGGACTCCGAGCATCACGACTCCTCCGACGAAGACGACGAAGTGATGCCC
AACAAACAGCACAAATACAGAAACATCAGCCAGCTGGAGTGGGACAACAGCACGATGTAA
PEP:
>BGIBMGA004592-PA
MVAHISQQLSEFKTAPIIGVTLKIMVIDENEARLRVRYPLNCEKRRNYKFDIAAVGCDGSYSNTVPVHITVTDVNEYAPV
FSQSAYVKTVDEGRIYDEILRVEATDKDCTPRYGDVCKYEILTDRSQPFTINVEGVIRNTEPLDYEKSHNHILSVVAYDC
GMMQSTPVMVTIKVNKPCRAGWKGVAERVDYAPGTGPLALFPAARLETCSSDERCPGVTRIQAAVSLQASRVGSGCDRDT
YSLHSQRTICGLDPKTIDLLPSPGAGNEWAKSLKPDSGRDGEQMFEFDGETTSAIVPESVLPHSLTSSFSISTWMRHAPP
ADGDKHRKEHVLCLADDHKMNRHHYALFVRNCRLILLLRRDFGEGDLNIFRPAEWRWKIPEVCDNEWHHYALNIRFPNVD
LFIDGEPYRSLDGKGPEVIDDWPLHPAHGVNTTLVVGACWQGTEKDMKHHLRGWLAGLGVLRGAAQPSHALSCLARCREG
LSLAPDLCNYSQVYQYIIAKSRQRHTNMKLSLLMQQDLKSVSVEGDGVADVETLLRRVAYGDARAFPTPGRRNVHVATTI
TCDNGRIIKARPAESYIMVLAPQTPSILLNGNENQKLDSCVVSVYPALNPDHEALSLRAAADLPLRYDIRAAVTRDGVIL
TGADTVHNYQKVLREIEYSNKKPAYYLNRVFKLTCSELNGRFTSNEYVQTLTVVHPHMSAANEVASRELPSGIADKADVA
RESVPDRGHAHGHAVAPRVYAAHAQRDAHAADVPAPRLIDLRPEQSATNGTKLTLFCDCADHVALLIGVVAVGVVVLAAG
VGVARTRRSPRAPAAPRARHVDSEMAWDDSALTITVNPMEESVPSCGTHVNAADSSDGESCSDSDSEHHDSSDEDDEVMP
NKQHKYRNISQLEWDNSTM
Swiss-ProtCalsyntenin-1
SUPERFAMILYSSF49313  Cadherin-like superfamily     
Gene3DG3DSA:2.60.120.200     
PfamPF00028  Cadherin; Cadherin domain     
SMARTSM00112     
ProSiteProfilesPS50268  CADHERIN_2; Cadherins domain profile.     
PRINTSPR00205     
OrthologiGroup-00246    Calsyntenin-1      

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