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Gene detail [Fasta]

Species Bombyx mori
GeneBGIBMGA004193
Positionnscaf2770:1074754..1098181[GBrowse]
SilkDBhttp://www.silkdb.org/cgi-bin/gbrowse/silkdb/?name=BGIBMGA004193
sequence mRNA:
>BGIBMGA004193-TA
ATGTCGGAGCTGGCGCAGCTGGTCCCCAGCCTGGACGGGGTGGAAGTCATAGTGACGGCCGCCGTCGGAGATCCATTCCT
GGACGATGTCATTGAAGGGTACAGTGTTGCCAGGATATTCAACTCTTCCTTGGCTGTCACTTTCTTAGGAGGGAGCCCTC
AGGTCTTCAAGCCGGCCATGCCTTTTGATGTTTACATGGCGGTGTCGTACCACGACGGGTCGCGCGTGGAGGCGGCGCGG
GCGGCGCGCCTGGCGCTGCGGGTCACGGCGCAGCTGGAGGGCCGCTCCGCCACGCTGGACGCGCTGCAGCCCGCGCCCGT
GCCCGGACACGCGCACGTGTGGCACCTCAAGCTCGACCTCTACAACCTGCTGCACTTGCAATCGGATCCGAATTACCGCG
AAGTGTTGAACAGCATAACCGGGATCCGGCTGACCGCCCAGCTGCTCGACGTGGGCGGCTACCACGCCTCCGCCGACGTG
CACTTCATCGCGCACTACAGCCCCAACAACCAGCAGATTAAGATATCTACCACCACCACCAGTGCGAAGGTCGGCGAATA
CATAATCTTCCACGTGCAAAGCAACTTCTACATAGAGTCGTTCAACTATGTGGTGATGTCCAAGGGCATTATATTGACTA
GCGCACAAGAGATAATGCAGGAAGGCGTCCGCACGTTCGCGGTGACGCTGTCGGCGGAGATGGCGCCCGTGGCCAGCGTC
GTGGTGTGGAGCGCCGACCGCCGCGGACACGTCGTGGCAGACTCGCTCACCTTCCCCGTCAACGGAGTCTCCAGGAACAA
CTTCACAGTGTTCATCAACAACCGCAAGCACCGCACCGGGGAGAAAGTGGAAGTGGCTATATACGGCGAGCCCGGGGCCT
ACGTGGGACTGTCCGGGCTGGACCACGCCTTCTACACGATGCAGGCCGGGAACGAACTCACATACGCTAAGGTGATATCG
AAGATGTCGTATTTCGATGAATCCACGAACGGCACGTTCGCGTACACGTGGCGCTCGCACTTCGGGGACGCGGACGAGCT
GGTCTACTTCCCCTCCTCCAGCTTCGGGATCGACGCTAACAGGACCTTCGAGTTCGCGGGGCTGGCGGTGCTGAGCGACG
TGGCGGTGACGCGGCGGCGCGGCGCCTGCAACGCGTCGCTGGGGCTGGCCGAGTGTCTGGACGGCGCCTGCTACCCGCTC
GCCAAGCGCTGCGACGCCGCCTACGACTGCGCCGACAGGACCGACGAGGCCAACTGTGCGGAGGAGAGAAGCGAGTTGGA
GCTGAGCCACTTCCGCAAGTTCCGGTTCAACCGCGTGCAGCGCCAGTACGACAACGTGTGGGCCTGGAGGGACGTCAACA
TCGGCCCGCACGGACGCTACGTGTTCACCCTCGACGTGCCGCAGGTGCCAGCCCACTGGACCGTGTCAGCCTTCAGCATG
TCTCCTTCACTTGGACTAGGAATGCTGACGGAACCCATTACGTACGTGGGAGTGCAGCCGTTCTTCATAACAGTGGAAGG
ACCGGACTCGTGTCGTCAGGGCGAGCAGGTCGGCCTGCGCGTGGTCGTGTTCAACTACCAGCTGCAGAACATCGAGGCCG
TCGTCGTGCTGGAGGCCTCGCCCGACTATAAGTTTGTTCACGTCGAGGAGAACGGCATTGTCCGCTCGTACAACCCGCGC
ACGTCGTTCGGCGAGCACCAGTTCTTCGTGTACGTGCTGGCGGGCGCGGCCAGCACCGTGCACGTGCCCGTGGTGGCGGC
GCGCCTCGGCACCGTGCACGTGCGTCTGCACGCCGCCGCGCTGCTCGGCACGCACTCCTACACCAAGACCATACACGTGC
TGGCGGACGGCGTGCCCCAGCACCGGCACCAGGCCGTGCTGCTGGACCTGTCCAACCGCGCGTACGTGTTCCAGTACATG
CACGTGAACGTGACGGAGACGCCCGTCATCCCGTACGAGGTGGACCGCTACTACGTGTTCGGCTCCAACCAGGCGCGCGT
CAGCGTGGTCGGCGACGTGGTGGGGCCGCTGTTCCCCACCATGCCCGTCAACGCCACCAGCCTCCTGGACCTGCCGATGG
ACTCTGCCGAACAGAACATGTTCAGTTTCGCCGCGAACATGTACTTCACCCTGTACATGCGGCTGATCAACCAGAGGAAC
AGGACCTTGGAGCGCGAGGCGTTCTACCACATGAACATCCTGTACCAGCGGCAGCTGTCCTTCATGAAACCCGACGGATC
CTTCAGCCTGTTCCGAAGCGACTGGAACCAGTCGTCGTCCAGTGTGTGGCTCACGTCGTTCTGCGCCAAGATCTTCCAAG
ACGCCTCCTTCAACGAGTGGGAGAACTTCATCTACATCGACCCGGACGTGATATCGATGGCGGTGTCGTGGGTCCTTGAC
CACCAGACGCCGGAGGGCGCCTTCTACGAGGTGACGTGGCTGCCCAACAGGAACGACAACTCCAGCCTCGTCGTGCCCAA
AAACAGCAGTCTGTACCGGGAGTACCTCAGCCACGCGAACTACGACCCCACCATAGTCGAGACTAAAGATTCGTTGATAA
TCCAGCGGAACATAACGCTGACGGCGCAGGTCGTCATCACGCTCGAGACCGTCAAGAACTTGAAGGACATCGGAGTCCGG
GAGGGCCTGGCGGCGCGCGTGGCGTCGAGCCAGCAGCGCGGCGCGGCGTGGCTGGAGCGGCACCTGCGCGCGCTGCAGGA
CGCGGGCGAGCCCTACGCGCTGGCGCTGGTCGCGCACGCGCTGTCCGTGGCGCGCGCGCCCGCCGCCGACCACGCCTACC
GCCTGCTCAAGCAGAGGGAGCGGTCCGAGGGTGGCCTAGTATACTGGGGCAAAGAACCAGTACCCCAGCCTCCGTACAAG
ATGGAAAACCAGAAGCCTTTCCTCCTGCCCCGGCTGCCGTACAAGTACGACTCCAACAACATAGCCACCACGGCCTTCGC
GCTGCTGGCCTGCATGGACCACCAGGACATCAACGAACCCATCGTCATGTGGCTGAACGCTCAGAGGCTCAAGGACGGAG
GGTGGGGCTCGACGCAGGACACGTACATAGCGCTGCGGGCCCTCATCGAGTACACGAACCGCAAACGTCTCCGCGACGTC
AGCTCGCTCACCGTGGAGGTGGACGCCGTCGCTCTGGGGGGCACCACGCGCACGCTGCACGTGGACAACGCCAACCTGGC
CGTCATGCAGAGCGTGCAGATCCCGGAGGCGTGGGGCACGGTGAAGGTGACGGCGCGCGGCGCGGGGTTCGCCATCCTGC
AGATGTCGGTGACGTACAACGTGGACATCCCGCGTTCCTCACGCCGCCCCCGCTGCACGCCTTCGAGCTGCTCTCGCNNN
NNNNNNNGGAACCAGTCGCACATCATGTTCCAGGCCTGCGCCAGCGAGGAGCTGGTTCGTCCTATAATATTGTTCTTTGA
CAGCTGGACCCTAGAGGAGGAGAGTCCTCGCTCGGGCATGGCGGTGCTGGAGGCGGGGGTCCCGACGGGGTACCGCATCC
AGCAGCAGGCGCTGGACGCCTACGTGCTGTCCCGCTCCGTGCCCACGCTGCAGAGGGCCCGATACACGCCCGTCAAACTA
TTCTTCTATTTTGAATATTTGTCCCGGGAGCCGACGTGCGTGAACTTCACGCTGGAGCGCTGGTACCCGGTCGCGAACAT
GTCCCGGTACTTGTCCCTCAAGGTCTACGACTACTACGCGCCAGAGCGGTACAACGAGACGATAGTGGACGCGCTTCCGA
CCTACCTGCTGAACATCTGCGAAGTGTGCGGCTCGTCCCAATGCCCGTACTGCGCGATATACAACGCCGCCGCCCGACCC
CGCCACGCCGCGCCGCTCGCGCTCGCCACTGTCATGTCAATAGCCGCGCGCCATCTGTACGGGACGCTCGGAGCGCTATA
G
PEP:
>BGIBMGA004193-PA
MSELAQLVPSLDGVEVIVTAAVGDPFLDDVIEGYSVARIFNSSLAVTFLGGSPQVFKPAMPFDVYMAVSYHDGSRVEAAR
AARLALRVTAQLEGRSATLDALQPAPVPGHAHVWHLKLDLYNLLHLQSDPNYREVLNSITGIRLTAQLLDVGGYHASADV
HFIAHYSPNNQQIKISTTTTSAKVGEYIIFHVQSNFYIESFNYVVMSKGIILTSAQEIMQEGVRTFAVTLSAEMAPVASV
VVWSADRRGHVVADSLTFPVNGVSRNNFTVFINNRKHRTGEKVEVAIYGEPGAYVGLSGLDHAFYTMQAGNELTYAKVIS
KMSYFDESTNGTFAYTWRSHFGDADELVYFPSSSFGIDANRTFEFAGLAVLSDVAVTRRRGACNASLGLAECLDGACYPL
AKRCDAAYDCADRTDEANCAEERSELELSHFRKFRFNRVQRQYDNVWAWRDVNIGPHGRYVFTLDVPQVPAHWTVSAFSM
SPSLGLGMLTEPITYVGVQPFFITVEGPDSCRQGEQVGLRVVVFNYQLQNIEAVVVLEASPDYKFVHVEENGIVRSYNPR
TSFGEHQFFVYVLAGAASTVHVPVVAARLGTVHVRLHAAALLGTHSYTKTIHVLADGVPQHRHQAVLLDLSNRAYVFQYM
HVNVTETPVIPYEVDRYYVFGSNQARVSVVGDVVGPLFPTMPVNATSLLDLPMDSAEQNMFSFAANMYFTLYMRLINQRN
RTLEREAFYHMNILYQRQLSFMKPDGSFSLFRSDWNQSSSSVWLTSFCAKIFQDASFNEWENFIYIDPDVISMAVSWVLD
HQTPEGAFYEVTWLPNRNDNSSLVVPKNSSLYREYLSHANYDPTIVETKDSLIIQRNITLTAQVVITLETVKNLKDIGVR
EGLAARVASSQQRGAAWLERHLRALQDAGEPYALALVAHALSVARAPAADHAYRLLKQRERSEGGLVYWGKEPVPQPPYK
MENQKPFLLPRLPYKYDSNNIATTAFALLACMDHQDINEPIVMWLNAQRLKDGGWGSTQDTYIALRALIEYTNRKRLRDV
SSLTVEVDAVALGGTTRTLHVDNANLAVMQSVQIPEAWGTVKVTARGAGFAILQMSVTYNVDIPRSSRRPRCTPSSCSRX
XXXNQSHIMFQACASEELVRPIILFFDSWTLEEESPRSGMAVLEAGVPTGYRIQQQALDAYVLSRSVPTLQRARYTPVKL
FFYFEYLSREPTCVNFTLERWYPVANMSRYLSLKVYDYYAPERYNETIVDALPTYLLNICEVCGSSQCPYCAIYNAAARP
RHAAPLALATVMSIAARHLYGTLGAL
Swiss-ProtCD109 antigen
SUPERFAMILYSSF48239  Terpenoid cyclases/Protein prenyltransferases superfamily     
Gene3DG3DSA:2.60.40.690     
PfamPF00207  A2M; Alpha-2-macroglobulin family     
SMARTSM00192     
ProSiteProfilesPS50068  LDLRA_2; LDL-receptor class A (LDLRA) domain profile.     
OrthologiGroup-00802    CD109 antigen      

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