| Species |
Bombyx mori |
| Gene | BGIBMGA003484 |
|---|
| Position | nscaf2674:6007156..6015129[GBrowse] |
|---|
| SilkDB | http://www.silkdb.org/cgi-bin/gbrowse/silkdb/?name=BGIBMGA003484 |
|---|
| sequence |
mRNA:
>BGIBMGA003484-TA
ATGGCGACGGCGAATGATTCTAAGGCGCCTTTGCGTCAAGTAAAAAGAGTACAGTTTGGAATACTATCCCCAGATGAAAT
TCGACGCATGTCAGTTACTGAGGGAGGGATTCGATTCCCGGAGACCATGGAAGGTGGAAGACCGAAGCTTGGCGGTCTTA
TGGATCCTCGACAAGGGGTAATTGACAGAAGCTCACGGTGTCAAACGTGTGCTGGGAATATGACAGAATGTCCAGGACAC
TTTGGGCACATTGATTTAGCTAAACCAGTTTTCCATATTGGTTTCATAACAAAAACAATAAAAATACTCAGATGTGTATG
CTTTTATTGTTCAAAGCTGCTTGTCAGCCCTACAAATCCAAAGATAAAAGAAGTTATAATGAAATCCAAGGGCCAACCCC
GCAAACGGTTGACCTATGTTTATGATCTGTGCAAAGGAAAAAATATATGTGAAGGTGGTGAAGACATGGATATTGGGAAA
GAAGGTGAAGAAGGTAAAAGAGGATCTGGTCATGGTGGTTGTGGGCATTATCAACCCTCTATTAGACGACAAGGTCTAGA
GCTCACAGCTGAGTGGAAACATGCTAATGAAGATACACAAGAAAAGAAAATTTTTGTCTCTGCAGAAAGAGTATGGGAAA
TTTTGAAACATATAACAGATGAAGATTCATTTATTTTGGGTATGGATCCAAATTTTGCAAGACCAGATTGGATGATTGTG
ACGGTTTTGCCTGTCCCTCCATTGTGTGTTCGTCCAGCTGTTGTTATGTTTGGCTCTGCCAAAAATCAAGATGACTTAAC
CCACAAGCTAGCTGATATAATAAAAGCTAACAATGACTTGGAAAAAAATGAGCAGTCTGGAGCTGCTGCTCATGTCCTTG
CAGAGAATATAAGAATGTTACAATTTCATGTTGCTACTTTTGTTGACAATGACATGCCTGGTATGCCAAAAGCTATGCAG
AAATCTGGGAAGCCCTTAAAGGCTCTCAAAGCCAGATTGAAAGGAAAAGAAGGAAGAATTCGAGGAAATCTAATGGGGAA
ACGTGTTGACTTCTCAGCTAGGACAGTAATCACACCTGATCCAAATTTACGTATAGATCAAGTTGGGGTTCCCAGATCAA
TTGCTCAAAATATGACATTCCCAGAGTTGGTGACTCCATTTAATCTTGATAGAATGCAAGAACTTGTCCGAAGAGGAAAT
GCACAATACCCTGGGGCAAAGTACATTGTAAGAGAAAACGGAGAAAGAATTGATTTAAGATTCCATCCTAAATCTTCAGA
TTTACATTTACTCTATGGTTACAAAGTAGAAAGACATCTAAGAGATGATGACCTTGTTATATTTAATCGTCAACCAACTC
TTCACAAAATGAGTATGATGGGTCACAGAGTTAAGGTACTTCCTTGGTCAACGTTTCGTATGAATTTGAGTTGCACATCA
CCTTACAATGCTGATTTTGATGGAGATGAAATGAATTTGCATGTTCCTCAATCAATGGAAACAAGGGCTGAAGTTGAAAA
TATTCATATAACACCTAGACAAATTATAACTCCACAGGCTAATAAACCTGTAATGGGTATTGTGCAGGACACATTGACTG
CCGTTAGAAAAATGACTAAGAGAGATGTTTTTTTAACAAAAGAACAAGTAATGAATCTTCTTATGTTTTTACCTACATGG
GATGGTAAAATTCCTCAACCTTGCATTTTGAAACCACAGCCTTTATGGACAGGTAAACAAATATTCACTTTAATAATACC
TGGTCCTGTTAATATGATTCGAACTCACTCTACTCATCCTGATGAAGAAGATGATGGTCCTTACAAGTGGATTTCTCCAG
GAGATACCAAAGTTGTTGTAGAACATGGAGAACTACTAATGGGTATTTTGTGTAAAAAGTCGCTTGGTGCATCTGCTGGC
TCTCTGTTGCATATTTGCATGTTGGAATTAGGCCATGAAACTGCTGGACGATTCTACGGTAACATTCAGACTGTCATTAA
TAACTGGCTTCTGTTGGAAGGTCACTCAATTGCTATTGGTGACACTATTGCTGATCCACAGACATATCAAGAAATTCAGC
GTGCAATCGTAAAAGCTAAAGATGACGTAATAGAAGTCATTCAGAAAGCCCACAATATGGAATTGGAACCCACACCTGGT
AATACACTAAGGCAGACCTTTGAAAATCAAGTGAACCGTATCCTCAATGATGCTCGTGATAAAACAGGTGGATCTGCTAA
GAAATCATTAACAGAATACAATAATCTCAAAGCTATGGTAGTTGCTGGCTCGAAAGGTTCAAACATTAATATTTCACAAG
TCATTGCTTGTGTAGGCCAACAGAATGTTGAAGGAAAACGAATCCCATTTGGATTTAGAAAACGCACCTTACCCCACTTT
ATTAAAGATGATTATGGTCCTGAATCCAGAGGTTTTGTTGAAAACTCTTATCTAGCTGGTCTGACTCCTTCAGAATTCTA
TTTTCACGCCATGGGTGGACGTGAAGGTTTAATTGATACTGCTGTAAAAACTGCTGAAACTGGATACATTCAACGGCGTC
TCATTAAAGCCATGGAGTCTGTAATGGTCCACTATGATGGTACAGTTAGAAACTCTGTTGGACAACTTATTCAATTGAGG
TATGGTGAGGACGGTCTCGCAGGAGAGACAGTAGAATTCCAGAACCTGCCGACTGTTAAATTGTCAAATAAAGCATTTGA
AAAGAAATTCAAATTTGACTCTTCCAATGAGAGATATCTGAAGAGAATTTTCAGTGAAGACATAGTCAGAGAGCTAACAG
AATCTGGAAGTGTCATAGCTGACCTTGAAAGTGAGTGGGAACAACTTTCTAAAGACAGAGAAACATTACGTCAGATTTTC
CCAACGGGAGAATCTAAGGTTGTATTGCCATGTAATTTCAAGAGAATGATTTGGAATGCTCAGAAAACATTCCACATAAA
CAAGAGAATACCAACAGACTTAAGCCCTATCAAAGTTATAAAAGGTGTATCAGACCTTCTAAAGAAGTGTGTCCTTGTAG
CTGGTGATGATCGTTTGTCTAAGCAAGCCAATGAGAATGCTACATTACTTTTCCAATGCTTAGTGAGATCAACACTTTGT
ACAAAATTTGTATCTGAAGAACATAGATTATCTAGTGTAGCATTTGAATGGCTTATCGGGGAAATAGAGGCAAGATTCCA
GCAAGCACAAGTAAATCCAGGTGAAATGGTAGGCGCTTTAGCTGCTCAATCACTTGGTGAGCCAGCTACTCAGATGACAT
TGAATACCTTCCATTTTGCTGGTGTATCATCCAAAAATGTAACACTTGGTGTGCCTCGTCTGAAGGAAATCATCAACATT
TCTAAGAAACCAAAGGCTCCTTCTCTAACTGTATTTTTGACCGGTGGAGCAGCCAGAGATGCCGAAAAAGCCAAAAACGT
TCTCTGTAGATTAGAACATACAACTTTACGTAAAGTTACTGCTAACACGGCTATTTATTATGACCCTGATCCTCAGAATA
CTGTTATTGCAGAGGACCAAGAATTTGTCAATGTTTACTACGAAATGCCTGACTTTGATCCTGCGAAAATTTCGCCTTGG
TTATTGCGTATTGAACTGGACCGTAAGAGAATGACCGACAAGAAATTAACAATGGAACAGATTGCTGAGAAAATTAATGC
TGGTTTTGGTGATGATCTCAATTGTATCTTCAATGATGACAATGCTGAAAAATGTATTGAAGCAAACATGCTGTCTGATA
TGACTTTGCAAGGCATTGAGGCTATTGCAAAAGTGTATATGCATTTACCACAGACAGAAGCTAAGAAACGTATAACTATA
ACTGAACAGGGAGAGTTCAAAGCTATAGCAGAATGGTTATTGGAAACAGACGGCACATCTCTTATGAAAGTGCTCTCAGA
GCGTGATGTGGATCCAATCAGAACTTTTAGTAACGACATTTGTGAGATATTCCAAGTGCTTGGAATTGAAGCTGTACGAA
AATCCGTCGAAAAAGAAATGAATGCGGTTTTGCAGTTCTACGGTCTATACGTGAATTATCGACACTTGGCATTGCTTTGT
GACGTCATGACAGCAAAAGGTTATCTTATGGCCATCACACGTCACGGCATTAACCGACAGGACACTGGTGCTCTTATGAG
ATGTTCATTTGAGGAAACCGTCGATGTTTTATTGGACGCTGCCAGTCATGCTGAAGTGGATCCTATGAGAGGAGTATCAG
AAAATATTATAATGGGACAGTTGCCGAGAATGGGTACTGGTTGCTTCGATTTATTACTTGATGGCGAGAAGTGCAAGGAA
GCAATGGGCGGTCTTGGAGGCGCAGAAGTGGGAATGTATTTCGGTGTCGGAACGCCATCTATGTCACCACTTATGACTCC
CTGGTCTACACAGAATACACCAGGATATGGAAGCAGCGTGTGGTCTCCATGTCAAGTTGGCAGCAGTATGACTCCTGGAG
GACCATCATTCTCGCCATCTAACGCATCTGACGCATCAGGACTCTCACCGGCATACAGTAATGCTTGGTCACCACAACCT
GGTTCACCAGGATCTCCCGGACCTCCGCTTTCACCTTACTCGTCGCCCGCAGGAGCGTCACCATCTTACTCCCCATCGAA
TCCTGTTTACGCTCCCGCGTCCCCGAGTATTACTCCAACATCACCACATTATTCACCTGCCAGTCCTTCTTACTCTCCAA
CTTCACCCAATTATTCCCCGACTTCACCAATATACTCGCCAACATCACCCAGCTACTCGCCAACATCGCCTGGTTATTCG
CCCACATCCCCATTATACTCCCCAGCTTCTCCTAGATACTCTCCGTCATCTCCCAACTATTCACCAGCAAGTCCGGCTTA
TTCAACAACTTCTAATTTCCCGACAACTTCACCTAACTATTCTCCATCAAGTCCTTCGTATTCTCCCACGAGTCTATCGT
ATTCTCCAACGAGCCCAGGTTATTCCACATCCCCTGGCTATTCGCCCTCGTCACCTAGATATTCACCAAATAGTCCTGTC
TACAGTCCTACTTCATCAAATTATTCGCCTTCGTCTCCAAATTACACTTCTGGATCTGTTTATTCACCTACGAGTCCTAC
ATATTCACCTACTTCTCGCTCATATTCTCCATCATCACCGAGCTATTCGCAGTCTTCTCCAAATTATTCACCCTCGTCAC
CGAATTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNTTATTCTCCATCATCTCACAATTATTCACGTTCATCTCCCCGGAATTCCCCAGGATCATCAAAATATTCC
CCGACATCGCCTACTTTTACTCCTACTTCTCCCAATTATTCTCCGAGCTCTCCTGCGTATTCTTCCACTGGTGGACCATC
TACCTATTCTCCAACTTCACCAACATATTCATCTACTTCACCCAATTATGATGATGGTGACGACTGAATTGAAAATGTTT
TTTTTTACTATAATGTACTATAATTTCTACTATACCTCCATAATATACTAA
PEP:
>BGIBMGA003484-PA
MATANDSKAPLRQVKRVQFGILSPDEIRRMSVTEGGIRFPETMEGGRPKLGGLMDPRQGVIDRSSRCQTCAGNMTECPGH
FGHIDLAKPVFHIGFITKTIKILRCVCFYCSKLLVSPTNPKIKEVIMKSKGQPRKRLTYVYDLCKGKNICEGGEDMDIGK
EGEEGKRGSGHGGCGHYQPSIRRQGLELTAEWKHANEDTQEKKIFVSAERVWEILKHITDEDSFILGMDPNFARPDWMIV
TVLPVPPLCVRPAVVMFGSAKNQDDLTHKLADIIKANNDLEKNEQSGAAAHVLAENIRMLQFHVATFVDNDMPGMPKAMQ
KSGKPLKALKARLKGKEGRIRGNLMGKRVDFSARTVITPDPNLRIDQVGVPRSIAQNMTFPELVTPFNLDRMQELVRRGN
AQYPGAKYIVRENGERIDLRFHPKSSDLHLLYGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCTS
PYNADFDGDEMNLHVPQSMETRAEVENIHITPRQIITPQANKPVMGIVQDTLTAVRKMTKRDVFLTKEQVMNLLMFLPTW
DGKIPQPCILKPQPLWTGKQIFTLIIPGPVNMIRTHSTHPDEEDDGPYKWISPGDTKVVVEHGELLMGILCKKSLGASAG
SLLHICMLELGHETAGRFYGNIQTVINNWLLLEGHSIAIGDTIADPQTYQEIQRAIVKAKDDVIEVIQKAHNMELEPTPG
NTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVAGSKGSNINISQVIACVGQQNVEGKRIPFGFRKRTLPHF
IKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLR
YGEDGLAGETVEFQNLPTVKLSNKAFEKKFKFDSSNERYLKRIFSEDIVRELTESGSVIADLESEWEQLSKDRETLRQIF
PTGESKVVLPCNFKRMIWNAQKTFHINKRIPTDLSPIKVIKGVSDLLKKCVLVAGDDRLSKQANENATLLFQCLVRSTLC
TKFVSEEHRLSSVAFEWLIGEIEARFQQAQVNPGEMVGALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINI
SKKPKAPSLTVFLTGGAARDAEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQNTVIAEDQEFVNVYYEMPDFDPAKISPW
LLRIELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNAEKCIEANMLSDMTLQGIEAIAKVYMHLPQTEAKKRITI
TEQGEFKAIAEWLLETDGTSLMKVLSERDVDPIRTFSNDICEIFQVLGIEAVRKSVEKEMNAVLQFYGLYVNYRHLALLC
DVMTAKGYLMAITRHGINRQDTGALMRCSFEETVDVLLDAASHAEVDPMRGVSENIIMGQLPRMGTGCFDLLLDGEKCKE
AMGGLGGAEVGMYFGVGTPSMSPLMTPWSTQNTPGYGSSVWSPCQVGSSMTPGGPSFSPSNASDASGLSPAYSNAWSPQP
GSPGSPGPPLSPYSSPAGASPSYSPSNPVYAPASPSITPTSPHYSPASPSYSPTSPNYSPTSPIYSPTSPSYSPTSPGYS
PTSPLYSPASPRYSPSSPNYSPASPAYSTTSNFPTTSPNYSPSSPSYSPTSLSYSPTSPGYSTSPGYSPSSPRYSPNSPV
YSPTSSNYSPSSPNYTSGSVYSPTSPTYSPTSRSYSPSSPSYSQSSPNYSPSSPNXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXILHHLTIIHVHLPGIPQDHQNIPRHRLLLLLLLPIILRALLRILPLVDHLPILQLHQHIHLLHPIMMMVTTELKMF
FFTIMYYNFYYTSIIY
|
| Swiss-Prot | DNA-directed RNA polymerase II subunit RPB1 |
|---|
| KEGG | K03006 RPB1, POLR2A; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] |
|---|
| SUPERFAMILY | SSF64484 beta and beta-prime subunits of DNA dependent RNA-polymerase superfamily |
|---|
| Gene3D | G3DSA:3.30.1490.180 |
|---|
| Pfam | PF04997 RNA_pol_Rpb1_1; RNA polymerase Rpb1, domain 1 |
|---|
| SMART | SM00663 |
|---|
| PRINTS | PR01217 |
|---|
| Coils | Coil |
|---|
| ProSitePatterns | PS00115 RNA_POL_II_REPEAT; Eukaryotic RNA polymerase II heptapeptide repeat. |
|---|
| Ortholog | iGroup-00947 DNA-directed RNA polymerase II subunit RPB1 |
|---|
