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Gene detail [Fasta]

Species Bombyx mori
GeneBGIBMGA003429
Positionnscaf2655:3055953..3058391[GBrowse]
SilkDBhttp://www.silkdb.org/cgi-bin/gbrowse/silkdb/?name=BGIBMGA003429
sequence mRNA: 
>BGIBMGA003429-TA
ATGGCCCGAGACAGAAGTCCTGAACGGCGGAGGTCAAGATCACGAGATAGAAGAGATCGGGATCGTTACGATGAACGCGA
ATCGTATCGTGAAAAAGTAAAGCGCAGGGACAGGTCTAAAAGCCCTAAAAAAGATGCGGATAAAGCTCGAAGCCCTTCTA
GAAAAGATCGCGATCGTTCTAGGAGTCCACTACGTAAAGAACGCGGTCGTTCGCGCAGCCCTAAGAAACGTGACGGCAAA
GACAAAGATCGACGTTACGAAGACAAGGAAAAGAGTAGATCAAAAAAAGAAGATGAAATGGAGGAAGACACTGCAGACAT
GAAGAAAGAGGATGAATCCATAGATAAAAAACCAATTAAAAAAGAGCCTTTGTCCTTAGAAGAACTACTTGCTAAGAAAA
AGGCTGAGGAAGAAGCCCGCAGTAAGCCAGTATTTCTTACCAAAGAGCAACGAGCACAGATAGCTTTGGAGAAACGGCGT
CAAGAAGTAGAAGCTATAAGAGCTAATACTGATAAGCCTCAAGTCACTATTGATTTAACAGGTCCGTCAAGACGGGAAGA
AGATAAAAGGCACAGAGAAGAACGTGAAAAAGATAGAGAAAAGGAACGTCGAGAGGAACGGGAAAGGAAATATGAAGAGA
GGAAAGCCTATTCAGATCGTCGAGAACCAAAAAAAGATAATGAAGAGACATCTAAAACAAAAGATAAAGAAAGAGAAGAA
GAGGCTATTAAAGCTCGTTACTTAGGTATAGTAAAGAAAAAGCGTAGAGTAAGACGGCTGAATGACAGGAAATTTGTTTT
TGACTGGGATGCGTCAGAAGATACATCAAATGATTATAATGTTTTGTACAAAGAAAGACATCAAGTACAATTCTTTGGTC
GTGGACACATTGCTGGTATAGATATCAAGTCTCAAAAGAAAGACCATAGCAAATTCTATGGGAATCTTTTAGAAAAGCGC
AGAACTGAGTTAGAGAAAGAACAAGAAAAACTACGCTTGAAGAAAGTGAAGAAGAAGGAAGACAAGCAAAAGTGGGATGA
TAGACACTGGTCTGAGAAAGATGTGGATGAGATGACAGAGCGTGATTGGAGGATATTCAGGGAAGACTACAATATTACCT
TAAAAGGAGGTAAAATTCCTAACCCTATACGTTCTTGGAAGGAAGCTCCCTTGCATACTGACATTATGGACATAATCAAC
AAAGTTGGATATAAGAGCCCAACTCCTATTCAAAGGCAGGCTATTCCAATTGGATTACAGAACCGTGACATTATTGGTGT
TGCTGAAACTGGTTCCGGTAAAACATTGGCATTCCTTATACCATTACTTACATGGATTCAATCTCTGCCAAAGAGTGAAC
GTATGGAAGATGCTGACCAAGGACCTTATGCTATAATTTTAGCTCCAACACGTGAATTGGCTCAACAAATCGAAGAAGAA
ACTAATAAATTTGGTATTCCTCTTGGTATCACATCAGTAGTGGTTGTTGGAGGTTTATCTCGTGAAGAACAAGGTTTTAA
GCTGAGGTTAGGCTGTGAGATTGTCATTGCCACTCCCGGTCGTCTTATTGATGTCTTAGACAACAGATATTTAGTACTAA
ACCGTTGTACCTATGTTGTTCTTGATGAAGCTGATCGGATGATTGATATGGGTTTTGAACCGGATGTTCAAAAAATCCTG
GAATACATGCCTGTATCGAACATAAAACCTGATAGTGATGCAGCTGAAGATGCTTCAGTATTGCTTGCCAATTATAACAC
AAAAAAGAAATACCGACAAACTGTGATGTTTACGGCAACAATGCCTCCGGCTGTAGAGCGGCTGGCTAGAAGTTATCTCA
GAAGACCGGCTATTGTATATATTGGATCTGTAGGAAAACCAGTAGACAGAACTGAACAAATAGTCTACATGATAGGCGAG
AATGAAAAACGTAGAAAACTTACAGAGATTTTGCAGCGTGGTGTCGAACCACCCATTATTATTTTTGTTAACCAGAAAAA
AGGTGCAGATGTTCTTGCAAAGGGACTTGAAAAACTTGGTTTCAATGCCTGTACGCTGCATGGTGGTAAAGGCCAAGAAC
AACGTGACTTTGCACTTGCCAGTCTCAAAGGGGGCGCTAAAGATATCCTCGTGGCGACAGACGTGGCAGGTCGTGGTATT
GACATTAAAGATGTCAGTATGGTCATTAATTACGATATGGCGAAGACTATTGAAGACTACACTCATCGTATCGGCCGTAC
CGGTCGTGCAGGAAAAACTGGTAAAGCTATGTCCTTTGTTACAAAAGAAGACTCCGCATTGTTCTATGATCTGAAGCAGG
TTTTGTTGGCAAGTTCCGTATCTACGTGTCCACCGGAACTTATGAACCACCCTGAGGCTCAACATAAGCCAGGGACAGTC
GTAACAAAGAAGAGACGTGAAGAGATGATATTCGCTTGA
PEP: 
>BGIBMGA003429-PA
MARDRSPERRRSRSRDRRDRDRYDERESYREKVKRRDRSKSPKKDADKARSPSRKDRDRSRSPLRKERGRSRSPKKRDGK
DKDRRYEDKEKSRSKKEDEMEEDTADMKKEDESIDKKPIKKEPLSLEELLAKKKAEEEARSKPVFLTKEQRAQIALEKRR
QEVEAIRANTDKPQVTIDLTGPSRREEDKRHREEREKDREKERREERERKYEERKAYSDRREPKKDNEETSKTKDKEREE
EAIKARYLGIVKKKRRVRRLNDRKFVFDWDASEDTSNDYNVLYKERHQVQFFGRGHIAGIDIKSQKKDHSKFYGNLLEKR
RTELEKEQEKLRLKKVKKKEDKQKWDDRHWSEKDVDEMTERDWRIFREDYNITLKGGKIPNPIRSWKEAPLHTDIMDIIN
KVGYKSPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLTWIQSLPKSERMEDADQGPYAIILAPTRELAQQIEEE
TNKFGIPLGITSVVVVGGLSREEQGFKLRLGCEIVIATPGRLIDVLDNRYLVLNRCTYVVLDEADRMIDMGFEPDVQKIL
EYMPVSNIKPDSDAAEDASVLLANYNTKKKYRQTVMFTATMPPAVERLARSYLRRPAIVYIGSVGKPVDRTEQIVYMIGE
NEKRRKLTEILQRGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGRGI
DIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSALFYDLKQVLLASSVSTCPPELMNHPEAQHKPGTV
VTKKRREEMIFA
Swiss-ProtProbable ATP-dependent RNA helicase DDX23
KEGG     K12858  DDX23, PRP28; ATP-dependent RNA helicase DDX23/PRP28 [EC:3.6.4.13]     
SUPERFAMILYSSF52540  P-loop containing nucleoside triphosphate hydrolases superfamily     
Gene3DG3DSA:3.40.50.300     
PfamPF00270  DEAD; DEAD/DEAH box helicase     
SMARTSM00487     
ProSiteProfilesPS51192  HELICASE_ATP_BIND_1; Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.     
CoilsCoil
ProSitePatternsPS00039  DEAD_ATP_HELICASE; DEAD-box subfamily ATP-dependent helicases signature.     
OrthologiGroup-00119    Probable ATP-dependent RNA helicase DDX23      

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