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Gene detail [Fasta]

Species Bombyx mori
GeneBGIBMGA003318
Positionnscaf2655:2676302..2689395[GBrowse]
SilkDBhttp://www.silkdb.org/cgi-bin/gbrowse/silkdb/?name=BGIBMGA003318
sequence mRNA: 
>BGIBMGA003318-TA
ATGTCTAAGGATATAAGATCATTTTTTATCACAACGAAGAAACCTGTAAAGTCCAAGGAAGCAGTTCCTGATGATGATGA
TATTATTCCTGAATCTCCTGATGTACAAATTAAAAAGAAGAAAAAAGAAGCAAGGAAGAAAAGAGTTATATTAGATGACT
CAGATGATGAAATACAAACGAAAAAACCAAAAAAATCGGAAACACACTTAAATAAAAAAAACAAATCTACTGCAGAATTA
AAAGAAGTGAAACCGATAGATTTATTTGGAAATGCACCCATCATAAGAACTGAGCCCATAGTCAAAAAAGAAAAGAACAA
AACAGAGTTAGGAATACATTCGGATGATGAATTCGAAAAGAGTCTTCTTGAAATAGATGAGATTGATCATCTAGAAAAAA
ATAAAAATATTGATTTCACACCCTTAGAAAATGGAAACAATGATAAATCACACGAAAGAAAACTGCAAAAAGAAATGAAA
CAAAAAGAAAGTATTAAATTAGACAAAGATTCATTACCTTCTTTGAAAGATAAAGAGAAGAAAACAGATAGCTACAATGT
TAATAATTTAAAAAACAAAAGCATAATAGATGAAGTTAAGGAAGGTAATAAAAGAAAATTCTCTGAATTTATTGAGACGA
ACATTAAAGACGAAAATGCTGTTAGCAAAAAAATTAAAATAGAAAAAAAAGATAAAGACGAGAGTTTCAGTTCAAAAGTA
GAAAGTGATTTAGAAATGAATTCTTCAGCAATAGATGATGAATCTAGCAAGAAGATAACGAAAAATAGAGGAAATAAGAG
TTTAAACGAGTCAGTATTATCGGATGAAGAGAGGCATCAACGTAGAGTACAATCTGCTGCATTATATAAGAAATATCTCA
ACAGATCAGCACCTAAACATTTAGGATCCAAAGAAATTCCTGTGGGTGCGCCGGACTGTCTTAAAGATTGTGCATTCCTA
CTGACTGGAGTTTTGGATTCGTTTGAGAGGGAAGAAATCGAGGAGGCTATTAAAAGATATGGTGGAACAGTTAAACCTGG
TGTTAGCAGGAAGGTAAACTACGTTCTGGTTGGTGAAGACCCAGGACCCGCAAAGATTGCTAAGGCGACAGACTTGGGCA
TCCCCATATTAAACGAAGACGAGTTCCTAAAATTGATCTCCGATTCTGTAAACAATACTAAACTTACTACCAGAGATAAA
GGTCTAAATGAAAAAAATATTGCATCTAAATCAAAGGATGAAAAAGAGAGGAAATCTGATAAATCTAGCAGTAAAGAAAG
GAAGAAAGATAAATCAAAGAGTCCTATTAAGATTAAGGAGGAAAATCGTAATTCTACATCTAAGCTTTCTGATGACAATG
TCCAAAATCAAGTTAAAACATTGAATTCAGAAAAACAATCAAGTTCAAGGGAATCGGTGTCTAGTTTAGGAATAGGTTTG
AAATGTGAACAGAATCATGATACCAAATGTAATAAGTACATGTGGGTGGATAAATACAAACCGCAGAATGTAAAACAAAT
AATCGGGCAGCACGGCGATTCTAGTAATGTTAAAAAATTAATAAATTGGCTGACGAAATGGTACGTGAATAGAAAAGCCA
AGCTGCCAAAGCCCAGTCCTTGGGCGAAGAATGATGATGGAGGCTACTTCAAGGCGGCCCTGCTCTCCGGACCTCCAGGA
GTTGGTAAGACGACCACAGTGTCGCTCGTGTGCAGAGAACTAGGATTCGACGCAGTCGAGTTCAACGCGTCCGACACGAG
AAATAAATCGTTGCTCAAAGAACAAATCGGCGAGCTGCTGGCCACGACGTCACTGTCCGGATATGCCAAAGGCGACACGA
GCAAGCAGGCCGTCTCCAAGAAACACGTTTTGGTAATGGACGAAGTCGACGGCATGGCGGGAAATGAGGATAGAGGCGGC
CTGCAAGAGTTGATAAATCTGATAAAATCAACATCAGTGCCAGTGATATGTATGTGTAACGACAGAAACAGTACGAAGAT
GAGGTCCCTGGTCAACTACTGCTATGATTTGAGGTTCAACAGACCAAGAGTGGATCAGATCAGGGCCGCGATGATGTCGA
TATGTTTCAAAGAAGGAATCAAAGTGGCCCCGGACGTGTTGACGCAGCTGATCGTCGCTTCTAACCAAGACGTGCGGCAG
ACCCTCAACTTACTCTCGATGTGGGCTGTCGACGAGGCGTTGGCCAGTGTGGACAAGTTAAAAAGAGACGCAAACACCAC
GAAGAAGGATGTCAAATTGGGTCCATGGGAGGCAGTAAGGAAAGTGTTCTCCGCAGAAGAACACAAGACTATGAGCATTC
ACGATAAAAGCGATTTGTTCTTTTACGACTACAACCTCGCTCCTCTGTTCGTGCAGGAGAATTACTTGCAAGTTGCACCA
CACTGTCCCAAACACGAGGTTCTAGAGAGATTTAGTAAAGCGGCCGACAGTATCAGTATAGGCGACATGGTTTCTGCGAG
AATCAGAGGCAGCCAGGCGTGGAGTCTTCTGCCTATTCAGGCCATGTACAGCTCGGTGCTCCCGGGACACGCGGTGTCGG
GTCACGTGGTCGGCCAAATCCAGTTCCCGGGCTGGCTCGGGAAGAACTCTCGCGCCAACAAAATGCACCGGCTCGCCCAG
GAGATACACGCTCACACAAGACTCAGCACCTCAGGGTCGAAATCTTCAATATACCTCGACTACTCATCACATCTAAGAGA
CGCAATAGTCAATCCACTTATCAATGAGAAAACAAACGGAATCACAAAGTCCTTAGAAATATTGGAATCCTATCATCTCC
TGAGAGAAGATCTGGATTCTTTGATTGAGCTATCTTTGTGGCCTGGACAGAGAAACCCGACAGTTTTGATTGAAGCCAAG
GTGAAAGCTGCTATGACTCGAACGTACAATAAGACGGCTAGCGCTCTGCCATACGCGCCGGGAGCCGTGAAGAAAGGTCG
AAATAGAAACGATGACGAAATGGATGACGGTGATGAAGCAGGTGATGTGACCGAGGAAGAGAACAGCGACGCAGAGAATG
ACGCATTTATAAAGAAGAAAAAGACAAAAGACAGTGAAAAATCGGATTTGAGTAAAGAAAAACCGAGCACAAGTAAAGCT
AAAACAAATAAAGAAAAGAAGAAGAAGAAGTAA
PEP: 
>BGIBMGA003318-PA
MSKDIRSFFITTKKPVKSKEAVPDDDDIIPESPDVQIKKKKKEARKKRVILDDSDDEIQTKKPKKSETHLNKKNKSTAEL
KEVKPIDLFGNAPIIRTEPIVKKEKNKTELGIHSDDEFEKSLLEIDEIDHLEKNKNIDFTPLENGNNDKSHERKLQKEMK
QKESIKLDKDSLPSLKDKEKKTDSYNVNNLKNKSIIDEVKEGNKRKFSEFIETNIKDENAVSKKIKIEKKDKDESFSSKV
ESDLEMNSSAIDDESSKKITKNRGNKSLNESVLSDEERHQRRVQSAALYKKYLNRSAPKHLGSKEIPVGAPDCLKDCAFL
LTGVLDSFEREEIEEAIKRYGGTVKPGVSRKVNYVLVGEDPGPAKIAKATDLGIPILNEDEFLKLISDSVNNTKLTTRDK
GLNEKNIASKSKDEKERKSDKSSSKERKKDKSKSPIKIKEENRNSTSKLSDDNVQNQVKTLNSEKQSSSRESVSSLGIGL
KCEQNHDTKCNKYMWVDKYKPQNVKQIIGQHGDSSNVKKLINWLTKWYVNRKAKLPKPSPWAKNDDGGYFKAALLSGPPG
VGKTTTVSLVCRELGFDAVEFNASDTRNKSLLKEQIGELLATTSLSGYAKGDTSKQAVSKKHVLVMDEVDGMAGNEDRGG
LQELINLIKSTSVPVICMCNDRNSTKMRSLVNYCYDLRFNRPRVDQIRAAMMSICFKEGIKVAPDVLTQLIVASNQDVRQ
TLNLLSMWAVDEALASVDKLKRDANTTKKDVKLGPWEAVRKVFSAEEHKTMSIHDKSDLFFYDYNLAPLFVQENYLQVAP
HCPKHEVLERFSKAADSISIGDMVSARIRGSQAWSLLPIQAMYSSVLPGHAVSGHVVGQIQFPGWLGKNSRANKMHRLAQ
EIHAHTRLSTSGSKSSIYLDYSSHLRDAIVNPLINEKTNGITKSLEILESYHLLREDLDSLIELSLWPGQRNPTVLIEAK
VKAAMTRTYNKTASALPYAPGAVKKGRNRNDDEMDDGDEAGDVTEEENSDAENDAFIKKKKTKDSEKSDLSKEKPSTSKA
KTNKEKKKKK
Swiss-ProtReplication factor C subunit 1
KEGG     K10754  RFC1; replication factor C subunit 1     
SUPERFAMILYSSF52113  BRCT domain superfamily     
Gene3DG3DSA:3.40.50.300     
PfamPF00004  AAA; ATPase family associated with various cellular activities (AAA)     
SMARTSM00382     
ProSiteProfilesPS50172  BRCT; BRCT domain profile.     
CoilsCoil
PIRSFPIRSF036578     
OrthologiGroup-00096    Replication factor C subunit     

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