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Gene detail [Fasta]

Species Bombyx mori
GeneBGIBMGA002843
Positionnscaf2575:439520..452684[GBrowse]
SilkDBhttp://www.silkdb.org/cgi-bin/gbrowse/silkdb/?name=BGIBMGA002843
sequence mRNA:
>BGIBMGA002843-TA
ATGTTGGAAGGTCTAGTTGCTTGGGTCTTGAACAATTATCTTGGGAAATACGTGGAGAACTTGAATACAGACCAATTGAG
TATCGCTCTACTTTCTGGCAAAGTAGAGTTGGAAAATCTTCCTCTGAAGAAAGATGCTCTGCGTCACTTGGGTCTACCTG
TGGAAGTCAAGGCTGGCTTCATTGGGAAGGTACAGCTTCAGATTCCAGTCCGTCAGATACGCTCAGCACCATGGGTTATT
GCAATAGAAAAACTTTATTTGGTAGCAGCTCCTGTTAACCTTGATGAATGGGATAGTGAAGCAGAGGCTCATCATGCACA
TGAACGTAAAGTAGCCCTTCTAGACGCCCTGGAGGCTCAGTGGCGCGCCGAACACGAGGCCTCCGACGCTGGGTACTACG
CCACCTCGTACTCCTCGTGGCTCAGCTATGGAACAGGACTTCTTGCAAATATTGTTGAAAATTTACAGTTGAAGATAATC
GATGTACACCTTCGATACGAAGACACAGTCACCTGCGGACGCGCTTTCGCATGCGGGCTGACTGCGCAGTCGCTGGCGGC
CGAGAGCTGCGACGCCAGCTGGAAGAAATGGTTCTCGCTGCTCCCCGACCCCGAGGGTCGCTCGCACAAGCTGCTGGAGC
TGCAGCAACTGGCGCTCTACTGGGATCCCATCAGTACGCCGTCCGCTATGCTTGCCGAACTTGGTATAGCTGAACTTACG
GAGCGCATGCGCGAGACGTGGCGCGCGGGGCACGCGTACGTGCTGGCGCCCACGTCGGCGCGCGCCCGCGTGTGCCGCGA
GCGCACGGAGCAGCCGCTGCGCTGCCGGGAGCGCCCGCGGCTCGCCTGCCAGCTCACCCTCGACACGGTGCTGCTCAACC
TCACCTCGCGGCAGTACAGCGAGGCAGTCGGTTGCGCACTAGGGCTGGAGCGTATCGGGCGCGTGCGAGAGTTCCGCGCT
CTCCGACCCTCCGTTCCAGTCAAGGGACACGTCAGAGACTGGTGGATCTATGCACTCTCCTGTCACATGCCACATAATAG
ATGGCGGCACCCGCGGCCCAGCTGGGCGGCGTGCGCCGGGCGGGCCCGCGCCGCGTGCGCGTACGTGCGCGTGTGCCTGC
AGCTCGTGACGTCACCGGCCGCCGCGCTGCCGCCCGCCGACAAGGCCGCCAAGGACGACTTCGAGTGGAACACTCCGCTG
CACGTACTCAAGCCGCTTCGGGAGATAGCCATGCGGAGCGTTCCGAAAACGACCCCTGTTTCCAGTCCAGACAGACCATC
ATCAGGACGCAGCATGTTGGTGCATTGGTTCCCGCAGTGGTGGGGCTGGTACAGCTCTCCCGCAGTCTCCACGGATACCA
CCACCACACCCGTCACGGCACCTTCAACCCCCACTCCTTCCACCCCTACCCCTATCCCCGCTCCTACATCGGCCCCCGCA
GAGCTGGAAGAGGAGATACTTGACGTAATAGCGGACTCGCTCGAGAACAACACTCTACTGAAGAAAGATATGGTATTCGG
GAAGTTTGATTTCGTGTTGAACAAAGGATCTTTTAATTTGTTAATGGACAGTGAAGACGGAGAGGAGAGCGGCGTGGAGC
TGGAGTTCGTGTGCGTGCGCGTGCAGACGGAGTGGAGGCCGCGGGGGGGCGCCGCGGGGGTGCACGTGTCCCTGGGGAGC
CTGTGTCTCACGGAGCGGATCACGCCCGGGACGCTGTTCCCCGTCGTCTGTGCGCCTCAGGGTGTGATCCGCTCGGGACT
GAGTTCCCTGGGGGGGGCTAGTGCGGGGTACGCGGGGAGCGGGGCGTCGTGGTGCCGCGCGCACGCGGCCCCCGCGCCCC
CCGCGCCCCCCGCACACAGCGAGCCACTCTTCCAACTGGCGTATGAAAAGAAACCGATCGGACTCAACTGCGATTACAAG
TTGTGGGTGAAGTCGGCGTCGCTGGAGGTGGTGTACTGCGAGGCGCTGGCTCGCTGGGCGCAGCGCTTCGCCCGGCGCGG
CTGGGACGCCCGGCTGGCGCTGGACTCCACGCGGGCCACGCTCATCAACCACTTCGAGCACATGGTCCACGCGCATTCCG
TACGCCACCGCTCCTGCTACCTGCTTTCGGAGCGCAGTTCCTGGCACGTGGAACTAGACATCTGGGCTCCTCAAATCCTG
CTGGTGGAGCAGCTCTGCTCGCGGGACTCCGCCCTCCTGCTCGTGGACTTCGGTCGTCTGAGACTGGCTAATGCCAACCA
AGACCTCACACATCATGCACCTGCTGATGATGAAGAGATGTTCATGACGCCGTGCTCGACCCCCCCGGGCAGCCTGTTGT
CCCCCGCGTCCCCCGAGCCGCCCGCGCCCCCCGGCCACCGCCCCCCCGACCCCTCCGCGCTGCACCCCGACACGCTGCAC
GACAGTATCTACGACAGGTACAAAATAGAACTGAGTGAGCTGCAGATACTAGTGGGTCGAGTGCGGGACAACTGGAAGTA
CGCGCACACCAAGACCACCTCCTCGCTGCACCTGCTGGACCGGTTCAGCATATCTCTGCAGGCGGAGCGGCGCGTGCTGG
AGACCAGCGACCCCGTGTACCCGCGCGCCGCGCTGTGCGGCTCGCTGCCGGCCCTCGTGGCGCACCTCACCGAGCACAAG
CTGTGCGCGCTGCGGGCTGTGCTGGCGCCGCTCAGATCGGAAGATGCGCCAGCTCCTCAGGCGAGTCCGGCGACAGAGGA
CGACGACGAAGCCAGCGTCAGATCAGAAACCGACCGCTCCGAGAGCTCCTCACACAACAACTCCACTATCTTCATGCTGC
AGTTTGCTGTGGATCAGATGTCGCTGGAGGTCCAGTCCCGCGGGCGCAGCATAGCCGAGGTGCAGGTCTGCGGGGTGAAG
ATGGCCGCCACGGCCAGGCCGCGCGACGTGAGCTTCTCGCTGTCTGTGCACTCCCTGCTGCTGGTGGACGCCCTCCAGAC
CTACGGGCCGGATTTCGAGCTGCTCGTGGCCAGCCACAAGCACGTGGGGTCAGTGGCCGTAGCGGCGCTTCTATTGCACT
TGGCCGCTCGTTTCTGCGTGGCCACTAATCGTTTGTTAGACACATACACTTACTCCTACTGGCTTAGTAATTACTCCACG
GTGCGACCGCCAGTGACCGATCGTGTGGAATTTGTTGAAGAATGTAATGTATTGAATTTATATTTCAATAAACAAAGAAT
GTTTGTTTGTGTTACAAGGATGGACACGGCGTCGGGCAGCATCCGCGGCTCGGAGCCCACGTCCCCCACGTCGCCCACCT
CCCCCACCTCCCCCGCGTCCCCCGCGCGCGCCCCCCGCCCCGCGCTCGCCCTGGCGCACCCGCACGTGCTGCACCACGCG
CTGCACTCGCTCACCGCGGCTAGGGGTAAGCGCCTGTCTGCTCCTGCCGCACGTGCACTCGTGCACTCCGGCCCGAGAGA
AGGCACCGATGAACTGGACCGAGCTAGCCCAGCACCGAGCTGGCTGACAGGCGACAATGGAAACTTCAACAACTGCGGCT
TCGGACCTATTTGGAGTAGCACTGAGAGCTTTGGAGAGAGTAACGGTTGGGGCAACTGGCCCGGCTCCGGTAATGCTGAG
AACTCTTGGGGGAACACGAGTTCCGCTTGGGGGGCCACCGGCCTCGGGTGGGCTAATCAAGAAACTATAGTCGAGTTAAT
CGGGTTTGCTCAGCGTGTGATGGGTCCCAAGACCAGCAAGACGCAAGGGGATGTCGACGAAACCCGACCGGAGCCCGCCG
CCGCGCACGCCAGCCCTCCGCCCGACGACGCGCCCAAGAGAGAAGTGCGCACAGAGATAACGTTTGACTTCCACCGGCTG
GGCGTGCTGCTGCTGCGCGCCGCCCTGCACGACGGCGCCGTGGTGGCCAGGAAGATAGCCACCGCCACTCTCAGCGAGGC
CAAGATACAAGCCACTTTAGTGGTGGAGGTGCGCGTGAGCGTGCAGGTGGCGCGGGTGTGGTACACGCACTCCAACGCGC
TGCTGCTGGAGCTGAGGTCGTGCCTCACGGAGTTCAAGCAGTACCTGTCCAACCTGGCGCGCTCCATCCGAGCCGCCGCC
GCCGACATGGCCATAGGACTCGTGCACCCGAGAGGGGAGTCGTTGTATTCCAACCCGAAGCTGTCCCAGTCGACGGAGGG
CGTGTCTCCGAGACGGCGCACCGCCAGCACCGGCACCTCGCTGGACGAGCCCCCAGACCTCACGTCCGACAGCGTCGTGC
TGAGGTAG
PEP:
>BGIBMGA002843-PA
MLEGLVAWVLNNYLGKYVENLNTDQLSIALLSGKVELENLPLKKDALRHLGLPVEVKAGFIGKVQLQIPVRQIRSAPWVI
AIEKLYLVAAPVNLDEWDSEAEAHHAHERKVALLDALEAQWRAEHEASDAGYYATSYSSWLSYGTGLLANIVENLQLKII
DVHLRYEDTVTCGRAFACGLTAQSLAAESCDASWKKWFSLLPDPEGRSHKLLELQQLALYWDPISTPSAMLAELGIAELT
ERMRETWRAGHAYVLAPTSARARVCRERTEQPLRCRERPRLACQLTLDTVLLNLTSRQYSEAVGCALGLERIGRVREFRA
LRPSVPVKGHVRDWWIYALSCHMPHNRWRHPRPSWAACAGRARAACAYVRVCLQLVTSPAAALPPADKAAKDDFEWNTPL
HVLKPLREIAMRSVPKTTPVSSPDRPSSGRSMLVHWFPQWWGWYSSPAVSTDTTTTPVTAPSTPTPSTPTPIPAPTSAPA
ELEEEILDVIADSLENNTLLKKDMVFGKFDFVLNKGSFNLLMDSEDGEESGVELEFVCVRVQTEWRPRGGAAGVHVSLGS
LCLTERITPGTLFPVVCAPQGVIRSGLSSLGGASAGYAGSGASWCRAHAAPAPPAPPAHSEPLFQLAYEKKPIGLNCDYK
LWVKSASLEVVYCEALARWAQRFARRGWDARLALDSTRATLINHFEHMVHAHSVRHRSCYLLSERSSWHVELDIWAPQIL
LVEQLCSRDSALLLVDFGRLRLANANQDLTHHAPADDEEMFMTPCSTPPGSLLSPASPEPPAPPGHRPPDPSALHPDTLH
DSIYDRYKIELSELQILVGRVRDNWKYAHTKTTSSLHLLDRFSISLQAERRVLETSDPVYPRAALCGSLPALVAHLTEHK
LCALRAVLAPLRSEDAPAPQASPATEDDDEASVRSETDRSESSSHNNSTIFMLQFAVDQMSLEVQSRGRSIAEVQVCGVK
MAATARPRDVSFSLSVHSLLLVDALQTYGPDFELLVASHKHVGSVAVAALLLHLAARFCVATNRLLDTYTYSYWLSNYST
VRPPVTDRVEFVEECNVLNLYFNKQRMFVCVTRMDTASGSIRGSEPTSPTSPTSPTSPASPARAPRPALALAHPHVLHHA
LHSLTAARGKRLSAPAARALVHSGPREGTDELDRASPAPSWLTGDNGNFNNCGFGPIWSSTESFGESNGWGNWPGSGNAE
NSWGNTSSAWGATGLGWANQETIVELIGFAQRVMGPKTSKTQGDVDETRPEPAAAHASPPPDDAPKREVRTEITFDFHRL
GVLLLRAALHDGAVVARKIATATLSEAKIQATLVVEVRVSVQVARVWYTHSNALLLELRSCLTEFKQYLSNLARSIRAAA
ADMAIGLVHPRGESLYSNPKLSQSTEGVSPRRRTASTGTSLDEPPDLTSDSVVLR
Swiss-ProtVacuolar protein sorting-associated protein 13D
PfamPF12624  Chorein_N; N-terminal region of Chorein or VPS13     
OrthologiGroup-00522    Vacuolar protein sorting-associated protein 13D      

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