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Gene detail [Fasta]

Species Linepithema humile
GeneLH17019
Positionscf7180001004924:2576443..2585142[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH17019
sequence mRNA:
>LH17019-RA
ATGGATGTGATAAGGGATCATCTTCTGGTACCAGCGAAGTATATGATACTGACAGATGGGAGAATCTGTCTAACAGTTCA
CAGAAACTGGCTTTCTCGGCTGCTCACAGCCGGCCCGTTTACGTTTATCAATCACGATCGACTGTCCAGCGATGAAATTG
CGGCACAACCCACTCTTGATAAATTGGGTTGTGATTGGCTGAGAATTTATGCAAAAGTATACGTAAAGCAATACAAGAAT
GCAATACCTTTGCCAAGAGGCAGGCCTACAACCAGCACGCGGAATCAAGCGGAGTTAATGTTCTCGCAATTGTTGCATTA
TGTAGCTGAAACAAACTATCGGAATTTATGGAAGGAAACGTACAAAAAGTATTACAGCCCCTGGAACTTTGTCGAGCAAA
AAGAGCAGTCTAACATCGGTACGAATGTGAGTGACGTTGTTATTATGCACGAAGTATTGAATAGGATGTACGGCTGTACT
TTAGTACAAGTGCAACACGGTACTGTCTTATCAGTATGCAATGGCACGCTGTCGGAAACGCATTGCAATCTTGTGCCAGT
CCATTTTGCAATAGAAACAACGTCCGCCTTCATAATTTTTTATGAACAGACTGCAAATTATTCTCTTCGCGAGTGTGTGA
TGTACAGTCCTGCTGCTCTTAGTACAAGTCATGGAAAACCATTGTTCGTAGTTTATCAATTACTGAGATTATCCAGAGAC
TTGCATGATCGTGGTCTCGCGTTGGGAGAAATTTCACTCAGTGATATTCTAGTCACGGATAACTTTACTATTCAGGTATT
ACCAAAATTAAGCGATAATATTTATTTGAAACCCGAAAGTGAGTGCATAGTGAGCTCTGCCACTTCTCAAGATGGCAAAG
AGAAAATTCCAAATAATAATGCTTACGGCAAGAAAGACGGCACGCCTCAATCGCACAACAGTGACTTCGGTTTGAACGAG
AGTATCGAGAAGTTGTGCGAGATGTGGGTGTACAACTGCATCAGCAATTTCGATTATTTGACCGCGCTGAATAATCTGGC
CGGCAGGAGATACGGCGATCCCAGTTGCCATCACGTTATGCCGTGGGTGACAGACTTTACGTCGCGGAGCGGCGGCAACT
GGCGGGATCTAACAAAGTCGAAGTTTCGATTGAATAAAGGAGACAGACAACTAGATCTCACGTTCGAGTCGCAATCTGAG
GTCGGGCATCATGTGTCGGACGTTTTGTCGGAGATCACGTATTACGTGTACCTTTCACGTCGATACAATAAATCCGTGCT
TTGCAAGCACGTGCGACCTTTGTGGGTGCCCGGAGAATATCCAGCTTCGATTCAGAGATTGCACGATTGGAGTCCCGACG
AATGCATACCGCAATTCTTCTCCGATGCCAATGTTTTTAAGTCTATTCACGAGGATCTGCCAGATTTGGAAATTCCAGCA
TGGGCGACTTCTCCGGAGGATTTTATCGAGAAGCACAGAGAGGCGTTGGAAAGCTTTTACGTTTCGGAGAGATTGCATCA
CTGGATAGATTTGACTTTTGGCTACAAATTGTCCGGTTCCGCTGCTGTAAAGTCGAAAAACGTTTGCCTGCAGTTGGTCG
ACAATCATACTGGCTTAACCAATTCCGGGGTTGTGCAGCTCTTCACACAGCCGCATCCGCAAAAAATCATTCCATCGCCT
TATTGGGGCAAAGTACCGCCGCGTCTGCGGTCGGCGTCTTCGACTAATAAAAGCCGGGGCGATCAGTCCGCGAGTAGAAT
CAGCGACGATGAAGGCCACAGCTCCGGCGTCGAGGAGGAAGAGCTGCCCGCGACGGCGGCGAATGCGTCGCGATCGTCGC
CTCTCGTGCTGAGTCGCTTGCTAAGCCGTTCCAGAGGCTCGTTACTCACGGAGGATAACGTGAAGACGGACAAGCCCGTG
AACCAACCTATCGTTCTTCCGAAGGACTTCAATCCCGTCGCGGCGATCGTGCAAGTGGAGACCATGCACGCCTTCATGAA
TAAAGTCAATCATCAAGTTTACAAGCCGGCGGTGGGATCGCACGATCTTTCCGCGAATTACAAGCAAATTGTGGCCAGCG
GTCGTATCAAGGAGCAACAAATACTCGGTTGTCTGATCGTGGAGATATTTCTGGCCGGCAAATTTCGCGCGACGTGGAAC
GTCGAGAAAGCGTCGTTCGCGCGGCGATTCGCGACGTGCCTGAACACGTTGAAGACGTCGGCGGACAATTTACCGAAATG
CATCAGAAACATCGTGTCTCTGTTGCTGCAAGTTGATATCATGCCGAAGAGTTATAACATCGGCAATGTGGAAATGAATG
ACATTTCAACGATGAACGAAATTCCCTTTCGTTATCCAACGATAACGTACATGGGCCTTCCGCCGCCGTCCGCGCATCAG
TTCCTCCAGCCGATATTATCCAGCAGTCTGTTCCCGTTCTCCAAGTATTGCCAGTATTTATACAATATCGTGGAAATGCT
GCAAGATTTCAACGGTTTGACGCGAGAATTGAATTCCATCGTGAAGATCGAGGATGACGCGGACTCTATAGCCAAAACGA
AGACGAAGTATCTCTGTAAAATAAGCGAGTGCAAGGTGAAGGCGATCGCTCGCGAACTGGAGCGGCTGCTGCCTTACGCC
GGCGGTGCGAGAGAGGCCACCTTGCAATTAATAGTTCCTCACATAGTGCAAATCATGGAAGAGCCTTACAGCGCGGTGTT
GGCGGTGTGGTATCTTTTCGATCCCATTGCGAAAACGTTAGGACCGAAGGACACAGCCGACACATTCCTCCCGTCTATCA
CGAAACTGTACGAAAACGGTTCCATTATGGACACTGCATTGTACATCGACGTGCTGCCTGCGGGAACGCTCGCCAAGTTC
CGGACCACTCGGTTGTATCACAGAACATTCCTGTTGAAGCTGATTGTCAGATTGGGGCTGCGCAGATTCTTGGACAATTT
TATAAATCCGCTGGTGGAAGCGGTGGGAGGGTACAAGGATTACGTGCAGGGTTCGCTCGGCACGTGCACCCACAGAACTG
GGAATCTGAAGAGCTGCGACTTGAGTGGACCCTGCAGTGACGGAGAAGGCATCTTATCTCCGCTGGATGAAGATTCATTC
GCGGATGTCGAGCACAATGTTGTCTCACCTTCCGCACCGACGCTCAACGATCATGTGTCTAACGTGACGACGGATAACGA
CGTCGAAGAAGTCTTTACTATGGAGACGGAGGACAATTCGTGGACTTCTCTGAACAACGCCGCGCCGTACGACATCGACT
TACACATAGATCTCAATTTGAACGTGAATGACGACTCGAACGACGACGGCGGTAAAAACTCGCCGAGCGGCTCGGTCAAG
TCACCGACGATCCCGATACCCAAGCAGGCGAACACCAGCGGGGCGAAATTGGTGACCGAGTTCAACAGCATCGGCTGCAA
CGTCGGCAGCAAGACTTCCAGCGAGGATTTCACATACGTCAACGTGTACGCCACGAATGTCCATTCCGGCAGCAATCTCT
CGGAGAGCGTATGCGGCGCGGAAGCCAGGGAAGACAATCCCGCCGCGCCCACCGGCGAGCCCGACGACAAGTGCGACGCC
ATCGAGTCCGACGGTGGTGCGCATCAGCTGGATCAGATCTATCAGAGATCCACGCCGAGCGAGTGCACGATTTCCGAGAT
GAGCGCGGAATCCGTAATCTGGCTGTCCCACAGACTCGGCCCGGTGCTCACGGCGCGACACCTGTCGCGCAACCTCCTGA
GAATGCTCACCCTCTGTTACGCCGGCAAGGAGAATCTAACCCCGATCGACGACAGCAGTTTCGCGTGCTTCGAGGGTGAC
GCGTGGAGGAAGCCGATATTGGCCGGTGATCAGAATGCTATCAAAGTGCTGGAGTGTCTCACAGCTATCGCAGGCACGTA
CAGAAATTCCTACTTCGCACATATGGTTGAACTGTTGGCGCTGTGCAAAAGAAAGCTAACGCAGAACTTGGAGGGAGGCC
TGGTTTCTTGCCTGGCTCTGTTGAATCACATCACGGCGTATCTCAGCGACTCCGCCGTGATGGACGTGCTTCATGAACCG
ATCGTTAAATCCATACTGCATCCGACAGTGCGCATACTGTCAACCGCGAGATTCACATTCCCAAATGGAACCCTCGCGCG
TGTCGCCTTGGCAGAAAAATGCCTGGAGGCGATGTTCACGCTCAGCCTACGTCTCGGCAGCGTAATTACGAAGAATCATT
TAGCGGTGCCGATTCAGCGCTTCTTCCTGGCCTTCGACAAGGCTTTCAGTGAGAATTTCGGCACCGAGGGTCCGTCGGAT
AATCCTGGGAAGAAAGCAAGCGCAATCACGAAAGCTGCGAGTGAGGGCGGATCGGATAACAATGGAGCTTACGTGTGGAA
TAAGCTTGACGCGGATGTCGCAGATTCGTATTCCCCTCCGGTCTTAGAAAATAGCAACGTGCCGGATTTGCAAAGAAATC
GAGCATTTGAGGAGCTGCGAGCTGTGTTCACAACCGAGTTCGCTCACAAAGCGTACATGCTCTTTTATAGATGCGTCGAC
AGTGAGATAATAGAGCAGATACTTAAAAATCACGAGCACATACAGGAGCTTTGTCACGATTATGAGCAAGGGGCGAAAGT
GACTTCCTTGAACATTGATGCGGATAAGTACAACACGTTGGCTTTCGTGGATCGCGACGTGGCGGAAAGTGCGGAAGCGA
TTGACAAAGGTGCCTGCAGCTTCGGAAATATATCTGTGATAGGAAACCGCTTCGAGATACAGAAGGACGACGCCAGATCC
CAGTCGGCGACGGACGCGGGTGGCGCCGCGAGCCGCGAGACAATCGGCCCGTCATCCGCCGGCAGACAGTTGCGCGGCAA
TTGGCTGGCATATTGGGAGCACGAGATCGGCCGACCGGACAAGGACACGATATTCAATATAAAACAGATAAAGCTGCAGA
CTTTCAGCGGACACACGAACAGCATAAGGTGTTTGTACGTACTGGACAACGAGAACAGCTTCATGAGCGGCGGCAGGGAC
AAAACCGTGAAATTGTGGAGTTTGCGAAGCCAGGGCGATGGAAATACAGTCTCGTCGTGCCAATACACGTACACCGGCCA
CAAGAAGTCCATCCTGTCGCTCACGTTTCTGGAATCTCTGAGATACGCGGTGACATGCGACGGCGTGATTCACTGCTGGG
ATCCTTTCATGGGCTCGCTGCTCGGATGTCCAGAGAGCAGTCGTCCTGTCCCCGTCAACACCTTAGCCTCGAGTCCCTCC
CCGTCGACGACCCTTCTTGTGGGCACAACCGACATTACTCTTCGAGTTATTGATTGCAGGACATTCCAGTACGTTAACGA
AATGAAGGTTTCTATGAATCCAACTGGCTTGATAAGATGCATCGTAGTGGCACCCAGCGGCAATTGGGTTGCCTTGGGTC
AGGCGTCAGGCTTTTTGACAATACTCGACACTCGCACCGGACTGATTATCGCGTCTTGGAAAGGACACGAGTGCGAGATA
CTGCAGTTGGAAGTCATAAATGAGACCACTATAGTTAGCTCTTCGTTGGATCAGACAATTGCTGTGTGGAGCGCGGTGGA
CGGAAAACTCAAATTTCACATGAAAGGCGCTACGGAGCCCGTTCATTGCATGGCGACGTACGAGCAGGAGTTAGTAATAG
GAACAACAGCGAACCGAATTGGCGTCTACACCGCGGTGGAAATGACCGCTTCGTTCTCCTCGTCCAAGTTGAGATCCGAC
GCTTTCAAAGGCGTTCTTACTGCCATGGCCGTCCTCCCTCTTAATCGATTGCTGTTATTGGGCGCCGACAATGGTGGAAT
AACATTACTGTGTTGAGAATCTCGGGCGTTA
PEP:
>LH17019-PA
MDVIRDHLLVPAKYMILTDGRICLTVHRNWLSRLLTAGPFTFINHDRLSSDEIAAQPTLDKLGCDWLRIYAKVYVKQYKN
AIPLPRGRPTTSTRNQAELMFSQLLHYVAETNYRNLWKETYKKYYSPWNFVEQKEQSNIGTNVSDVVIMHEVLNRMYGCT
LVQVQHGTVLSVCNGTLSETHCNLVPVHFAIETTSAFIIFYEQTANYSLRECVMYSPAALSTSHGKPLFVVYQLLRLSRD
LHDRGLALGEISLSDILVTDNFTIQVLPKLSDNIYLKPESECIVSSATSQDGKEKIPNNNAYGKKDGTPQSHNSDFGLNE
SIEKLCEMWVYNCISNFDYLTALNNLAGRRYGDPSCHHVMPWVTDFTSRSGGNWRDLTKSKFRLNKGDRQLDLTFESQSE
VGHHVSDVLSEITYYVYLSRRYNKSVLCKHVRPLWVPGEYPASIQRLHDWSPDECIPQFFSDANVFKSIHEDLPDLEIPA
WATSPEDFIEKHREALESFYVSERLHHWIDLTFGYKLSGSAAVKSKNVCLQLVDNHTGLTNSGVVQLFTQPHPQKIIPSP
YWGKVPPRLRSASSTNKSRGDQSASRISDDEGHSSGVEEEELPATAANASRSSPLVLSRLLSRSRGSLLTEDNVKTDKPV
NQPIVLPKDFNPVAAIVQVETMHAFMNKVNHQVYKPAVGSHDLSANYKQIVASGRIKEQQILGCLIVEIFLAGKFRATWN
VEKASFARRFATCLNTLKTSADNLPKCIRNIVSLLLQVDIMPKSYNIGNVEMNDISTMNEIPFRYPTITYMGLPPPSAHQ
FLQPILSSSLFPFSKYCQYLYNIVEMLQDFNGLTRELNSIVKIEDDADSIAKTKTKYLCKISECKVKAIARELERLLPYA
GGAREATLQLIVPHIVQIMEEPYSAVLAVWYLFDPIAKTLGPKDTADTFLPSITKLYENGSIMDTALYIDVLPAGTLAKF
RTTRLYHRTFLLKLIVRLGLRRFLDNFINPLVEAVGGYKDYVQGSLGTCTHRTGNLKSCDLSGPCSDGEGILSPLDEDSF
ADVEHNVVSPSAPTLNDHVSNVTTDNDVEEVFTMETEDNSWTSLNNAAPYDIDLHIDLNLNVNDDSNDDGGKNSPSGSVK
SPTIPIPKQANTSGAKLVTEFNSIGCNVGSKTSSEDFTYVNVYATNVHSGSNLSESVCGAEAREDNPAAPTGEPDDKCDA
IESDGGAHQLDQIYQRSTPSECTISEMSAESVIWLSHRLGPVLTARHLSRNLLRMLTLCYAGKENLTPIDDSSFACFEGD
AWRKPILAGDQNAIKVLECLTAIAGTYRNSYFAHMVELLALCKRKLTQNLEGGLVSCLALLNHITAYLSDSAVMDVLHEP
IVKSILHPTVRILSTARFTFPNGTLARVALAEKCLEAMFTLSLRLGSVITKNHLAVPIQRFFLAFDKAFSENFGTEGPSD
NPGKKASAITKAASEGGSDNNGAYVWNKLDADVADSYSPPVLENSNVPDLQRNRAFEELRAVFTTEFAHKAYMLFYRCVD
SEIIEQILKNHEHIQELCHDYEQGAKVTSLNIDADKYNTLAFVDRDVAESAEAIDKGACSFGNISVIGNRFEIQKDDARS
QSATDAGGAASRETIGPSSAGRQLRGNWLAYWEHEIGRPDKDTIFNIKQIKLQTFSGHTNSIRCLYVLDNENSFMSGGRD
KTVKLWSLRSQGDGNTVSSCQYTYTGHKKSILSLTFLESLRYAVTCDGVIHCWDPFMGSLLGCPESSRPVPVNTLASSPS
PSTTLLVGTTDITLRVIDCRTFQYVNEMKVSMNPTGLIRCIVVAPSGNWVALGQASGFLTILDTRTGLIIASWKGHECEI
LQLEVINETTIVSSSLDQTIAVWSAVDGKLKFHMKGATEPVHCMATYEQELVIGTTANRIGVYTAVEMTASFSSSKLRSD
AFKGVLTAMAVLPLNRLLLLGADNGGITLLC
Swiss-ProtWD repeat-containing protein 81
KEGG     K17601     
SUPERFAMILYSSF50978  WD40 repeat-like superfamily     
Gene3DG3DSA:2.130.10.10     
PfamPF02138  Beach; Beige/BEACH domain     
SMARTSM00320     
ProSiteProfilesPS50082  WD_REPEATS_2; Trp-Asp (WD) repeats profile.     

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