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Gene detail [Fasta]

Species Linepithema humile
GeneLH16921
Positionscf7180001004924:1416648..1425273[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH16921
sequence mRNA:
>LH16921-RA
ATGAACGACGCCGACGTGCTAACGCCGAGCGGGCATTGCTGCTTGCGTCGGGGATTAAGGAAATATCCTAGTATCGATAA
GAAATTGTGGGACGCAAGCAGCAGATGGATACTACAATGGGATAATATAGTCAAGCATCCGGGGGCAAGGGCGAGGGGGT
GTCACTGCGACATTCACAAGCCACCTTGGCTATACCCGGAGTTAGTCGGCAAAGATAACGACGAACCTGACAGAGCGATT
AAATCGGCTCCCGTTAAGAGGTTGAACATGCCCCCAAAAAGAGGTCAATTTGGACCGGCTAAGACACCATCCTCTGCCTT
AGGATGTACGCTAACTGTTCGCTTGCATGACAGCTCCCTCCAGTACTACCGCATCCACGGTCCCAAGGGCAGCGACCGTC
AAAAGAGCTCTGTCAGTAAGATCGGCATCAGTGAATGTAAACAACATTATCCCTATCTAGCTGGAGCCGTCGATGAAGAA
TCCTTTATCACTTCGTTCGAGGATGTGCCTACCGTGACCCTGTTTTCTGCGAAGGATCTCGAGGAACAGATGAAAGTAAT
CAGGGATACAGTGGGCGACGACAAGAAGGATTGGAAGCAGAGAATGGATAGCATGAGAAAGTTAAGAGGCATTGTAATCG
CAGGCGGCACTAATTACGAAAATTTCCACGAGTGCCTAAAAAGCGTACAGCGACCGTTCGAACAGGCCTGCACCGACCTG
AGATCCCAAGTAGCGAGGGAGGCGTGTATAACTCTAGCCTTTCTGAGTCAGAGTCTGAAGACGAAATTCGCCGGTTTTGG
CGAGGCGGTCTTGCTCACGTTAATGAACCTCATACAGAACAGTGCCAAGGTCGTGGCGTCAGCCGGCGCGGTGGCAGTTC
GGTTTATCCTTCAAAATACCCACTGCAGCCGATACGTGCCTATTATTATATCGTGCGTGAGCAACAAAAGCAAAGACATT
CGCAGGGCGTCCTGGGAGTATCTCGCTCTGATACTGCAGACCTGGCCTACGCAGATATTGCAAAAGCACGTAACGACACT
GCCGGACGCGCTGAAGAAGGGAATCGCCGACTCCGACGCGGAAGCGCGAGTCTTCGCCAGGAAATCATACTGGGCATTTA
AAAATCACTTTCCAGAGCAGGCTGAAATACTACTTAATAATCTGGATGCGACATACAAACGCTCCTTGATGTCTCTCAGC
AATAGCGGCAGTAGTAACAGCTTAAATATTGTGGCTAATGCGAGATCGTCGAGCGTCAGCCCGCGTACAGCCCGGCCCGT
GATGAGCGCGGCAGGTAGTACGGAAAATTTGCATCAGACCACGGGTCAACCGCACGGTCCGCTCAGACGTACCCCGTCCT
TGCCTCGGTCTTATCGTCAGTCTGGTATCCCGATACTGCAAAGACCAACAGACAGTCACTACCGAGGAACGCCTGGGGTT
AGATCTACCAGTGCAATCGATCTGCAAGCTGCTCAGAGAGCGAAGGCCAGGATAATGTATGCGAATATGAGCAGGCAAAA
AGCGGCGGCGGCTCTTCCTCGTCCCAGTAAATCCCCGGATCCCAATGCGGTTGCTAGTCCAGAAAGAATTGCTAGGACGA
GGACAAGAGTCTCGGGAGTTTCGCAATCTCAACCTAGCAGTAGATCAGGTTCGCCGTCGTCTAGATTAAGCTACGCCACG
TATAATCGCGAAGGCGAATCACTGATAGGCAGACCGAGGCGATTATCTGGACACGCGATTAGTAGCACAAGCAACAGTCG
CGAGCCCAGCCCACAGAGATTTGGAATGGACAGGAGTTTTGCCAGCAAACTGAGAGGGAGAAATCTACACATGTCACCAA
CGGACAGCACGAGACCACCGGTGATGGCGCAAAAAATGCTGCAGAAGTCACGCGAAGCGGAGTCCGCTTTGGCGGATGCT
TTGACTTTTGACAGTATCGATAACTACACCAGAATACCGGGCAAAGGAGATCACAGCGACGACAGCGAGAACAGCAGTAT
ATGCTCGGAACGAAGCATGGACGGTTTTAGACGAGCTAGCGATTCGTTCTCATGGAGTGGCTCCCAACCGAGACTGTACC
GTGATCTATGGGATCAGTCTACTCCGAAGGATATCAAAGAAATTATTGAAATCTGTGCTCACAAACATTGGGGAGACAGG
AAAGAAGGTTTGGTGGGCTTGCAGCATTACTTGAGCAGCGGTAACACGCTGACAGCGACTGATTTGCGTAGAATCACAGA
CATTTTTACGAAAATGTTCATGGATTCTCACACCAAAGTGTTCAGTCTGTTTCTGGACACGTTGAACGAACTAGTTATCA
CTCACAATGATGGACTTGGCGACTGGCTTTACGTTCTGTGCGCGAGGCTCCTCAATAAATTGGGCACCGATCTGTTGGGA
TCTATACAAACAAAGATTCGCAAAACGCTTGATGTTGTGAGAGACTGTTTCCCGGGCCAACAGCTTCTACCGGCTGTGAT
GAGGTATCTGACAGATCCAACACAAACACCAAATACTCGCGTGAAAATAGAAGCATTGACTTTTATCACGCAGATCGCTG
AGACGGCAGAACCGTCCGCGCTGGGCAGTTCTGCAGCGACAGCACTTGCACGGCTGCTCGACTGGTCGAACGATGTTAAA
AGCCAAGAAGTGAGGAGGCACGCGCAGAACGCTGTGATATCGCTTTACAATCTCAATCCGCCTCAAGTTACTATGATACT
CTCCGAGTTACCGAAATATTACCAAGAAACAGCCTGGCCTTTGGTGCAGAATCACCTCAGGAAATCGTCTACTACGAGTA
ATCCGGCATCGCCCGGCACACCGCCACCCAGAGCACAGAGTTCGCCAGCTCGCACGAAAGCGAAGAACGATATTAAAGCG
GACTCGAAGACTGAAATCGACGGAGGAGATGAAAACTTGGAGGAAGTATACAAATCTTTGCGCCGTACGACGGCTGAAAT
TCAAAATTATGGTTTCGAACGTTTGGAGAGAGCAACCACCAGCAAAGACAGCGGCATTAGCAACATGGCCGACGTGGAGG
AAAGAATAGAAGGACTCACGTTATCCAATTCGGGCCGATCCTCGTCCGTTTCTTCACCAACGCAACGGGGACGTTCTGGT
AGTAATATAACAGTGAATGGATCCGATACGATTGCCGGTGATTTAATCCTACCTCAAGAGAACAATGGCTCGTCGCCCGA
TTCGGTGAGCAGACCGGAACTCGTGGATAATATGGTGAAGACTTTACAATCTAAAGTCGCGCAAACCACGGAAAAAGTAT
CGGCGCTACAAGAATTTCAGTTATACGTCCGCGAAGGCGATCCATCGTATATTAAACGAAACTTTAAGAAAGTGCTCAAA
GTTTTATTAGATAGCTTATCTAACGATGGGAAAGTGATACAAGTGGAAGTTCTTCAAACGCTGATCGATATGTTAAAGTG
TTCCGAATTGATTGAGAGCTTTTCGTCTTACAATGAATTGTTGGTGCTGAAAGTTATCTACGCCTACAAATCCGACGATC
AGAAGGTCGATTCTTCCAGCGGTAGCGGCGGCAGATCTCCAGTCCATTGGAACGCAGAGAAATGTGCCGCAACGATGGCC
ATGGTTCTAAAACCAGAACAAATCATTCATTTGGTTTCCACTATAATCGCCACAGAGACGTATCCTTTAAATATGGGCGC
GATAAAGATGTTGCACAAAGTAGTGGATCACTGGGGTCGCGAAGCTATCGAACCTCATCTCGCCAAGGTTATGCCGGGCC
TCATCAAGGCTTACGACGATGCCGAGAGCGCAGTTCGTAAAAGTGCCGTGTTCTGCATGGTAGCAATCCATGTTGCGGTC
GGCGAGGAGGTGCTAAAACCGCACTTAAGCTGCCTGTACTCCAGCAAGCTAAAGCTGCTGAACATCTATATACAGCGCGC
GCAGCAACAGGCGAACAGTCAGCCGGCGAGCCCGCGTAGCAACAATAAAAACTAA
PEP:
>LH16921-PA
MNDADVLTPSGHCCLRRGLRKYPSIDKKLWDASSRWILQWDNIVKHPGARARGCHCDIHKPPWLYPELVGKDNDEPDRAI
KSAPVKRLNMPPKRGQFGPAKTPSSALGCTLTVRLHDSSLQYYRIHGPKGSDRQKSSVSKIGISECKQHYPYLAGAVDEE
SFITSFEDVPTVTLFSAKDLEEQMKVIRDTVGDDKKDWKQRMDSMRKLRGIVIAGGTNYENFHECLKSVQRPFEQACTDL
RSQVAREACITLAFLSQSLKTKFAGFGEAVLLTLMNLIQNSAKVVASAGAVAVRFILQNTHCSRYVPIIISCVSNKSKDI
RRASWEYLALILQTWPTQILQKHVTTLPDALKKGIADSDAEARVFARKSYWAFKNHFPEQAEILLNNLDATYKRSLMSLS
NSGSSNSLNIVANARSSSVSPRTARPVMSAAGSTENLHQTTGQPHGPLRRTPSLPRSYRQSGIPILQRPTDSHYRGTPGV
RSTSAIDLQAAQRAKARIMYANMSRQKAAAALPRPSKSPDPNAVASPERIARTRTRVSGVSQSQPSSRSGSPSSRLSYAT
YNREGESLIGRPRRLSGHAISSTSNSREPSPQRFGMDRSFASKLRGRNLHMSPTDSTRPPVMAQKMLQKSREAESALADA
LTFDSIDNYTRIPGKGDHSDDSENSSICSERSMDGFRRASDSFSWSGSQPRLYRDLWDQSTPKDIKEIIEICAHKHWGDR
KEGLVGLQHYLSSGNTLTATDLRRITDIFTKMFMDSHTKVFSLFLDTLNELVITHNDGLGDWLYVLCARLLNKLGTDLLG
SIQTKIRKTLDVVRDCFPGQQLLPAVMRYLTDPTQTPNTRVKIEALTFITQIAETAEPSALGSSAATALARLLDWSNDVK
SQEVRRHAQNAVISLYNLNPPQVTMILSELPKYYQETAWPLVQNHLRKSSTTSNPASPGTPPPRAQSSPARTKAKNDIKA
DSKTEIDGGDENLEEVYKSLRRTTAEIQNYGFERLERATTSKDSGISNMADVEERIEGLTLSNSGRSSSVSSPTQRGRSG
SNITVNGSDTIAGDLILPQENNGSSPDSVSRPELVDNMVKTLQSKVAQTTEKVSALQEFQLYVREGDPSYIKRNFKKVLK
VLLDSLSNDGKVIQVEVLQTLIDMLKCSELIESFSSYNELLVLKVIYAYKSDDQKVDSSSGSGGRSPVHWNAEKCAATMA
MVLKPEQIIHLVSTIIATETYPLNMGAIKMLHKVVDHWGREAIEPHLAKVMPGLIKAYDDAESAVRKSAVFCMVAIHVAV
GEEVLKPHLSCLYSSKLKLLNIYIQRAQQQANSQPASPRSNNKN
Swiss-ProtCLIP-associating protein 1
KEGG     K16578     
SUPERFAMILYSSF48371  ARM repeat superfamily     
Gene3DG3DSA:1.25.10.10     
PfamPF12348  CLASP_N; CLASP N terminal     
ProSiteProfilesPS50077  HEAT_REPEAT; HEAT repeat profile.     

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