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Gene detail [Fasta]

Species Linepithema humile
GeneLH26249
Positionscf7180001005066:325284..356228[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH26249
sequence mRNA: 
>LH26249-RA
ATGAATCGTCCTGTTAAGGACCCGATTCCAACCACGCAGACGCGGCCGGTAATATCTTACCGCGCCCGTCACCTTTCATT
CGAAACTCGCGGCCTTACACTCTGCCGCGAATGCGCCTATAACTATATTTTACGTTGTAATTACTATTGCTCACCTTTCT
TTCTCTATTTTCTTTTTCAGAACCTGAAGAACCAGATCATGACGACAAATGTTTGGGTGGAACAGGAATGGAACGATTAC
AAGTTGAAGTGGAATCCGGACGATTACGGCGGTGTCGACACCCTTCACGTGCCATCGGAACATATATGGTTACCTGACAT
TGTTCTTTACAACAAGGCCGACGGTAATTACGAGGTAACCATTATGACTAAAGCAATTTTGCACCATACGGGGAAAGTCG
TGTGGAAACCACCAGCAATCTATAAATCATTTTGTGAGATCAACGTGCAGTTCTTCCCCTTCGACGAGCAGACTTGTTTT
ATGAAATTTGGTTCGTGGACTTACGACGGTTACACGGTCGACCTGCAGCATCTCTTGCAGTCCGAGGACTCGAATGAAAT
CGACGTTGGGATCGACCTGACCGACTATTATATCTCCGTCGAGTGGGACATCCTAAAAGTGCCTGCCGTGAGGAACGAGG
CGTTCTACATATGCTGTGAAGAGCCCTATCCCGACATCGTGTTCAACATCACCCTGCGCCGCAAGACCCTCTTCTACACG
GTGAATCTGATAATACCGTGCGTGGGCATATCCTTCCTGTCGGTGTTGGTGTTCTACCTGCCGAGCGACAGCGGCGAGAA
GGTCTCCCTGTCAATCTCGATACTCCTCTCGTTGACGGTGTTCTTCTTGCTGCTGGCTGAGATTATACCGCCCACGTCGC
TCACGGTGCCGCTGCTGGGCAAGTACCTGCTCTTCACGATGGTGCTGGTAACGTTCTCCGTGGTCGTCACGATAGCCGTG
CTGAACGTGAACTTCCGCTCGCCCGTGACCCACCGCATGGCCAATTGGGTGCGGGTGGTGTTCATTCAGTTTCTGCCGCG
GATCCTCCTCATCCAGCGGCCGAAGAAGGAGGAAGACGACGACGAAGACGAGGACGGCAACGGCGTCGGCATCGGCGCGA
ACGGTGACGCCGACGACGATGGTGTCGACGATGACGAGGACGACGACGACGATATCGAGGCGGCGAACGGCAAGCCGCCC
GAGGGCATCCTCACCGATGTGTTCCATGTTCCAGAGACTGATAAGTACGACACGTACTACGGCAAAAGGTTCAGCGGAGA
GTACGAGGTACCGCCGCACGGGCTGCCGCCACCAGCGACGAGGTACGACCTCGGCGCTGTCGGCACCGTCGCACCTTGCT
TCGAGGAGCCCCTACCCTCGCTGCCACTGCCGGGGGCGGACGACGATCTCTTCGGCCCGGCTAGTCCCGGATACGCTCAC
GAGGACGTCAGCCCCACCTTCGAAAAGCCGTTGGTACGCGAGATCGAGAAGACCATTGACGATGCTCGCTTCATCGCCCA
GCACGCCAAGAATAAGGACAAATTCGAGAGCGTAAGTGTCGCTTCTTTGTCTGTCGCGATGGTGCTCGACCGGATCTTTC
TTTGGGTCTTCACGGTGGTTTGCGTGATCGGCACGGCGTATATTATTTTTGAAGCGCCAAGTCTGTACGATACCACGAAG
CCGATCGACATTAAGTACAGCAAGATCGCTAAGAAGAAGATGATGCTGATGAACATGGGCCCCGAGGAGGACTAG
PEP: 
>LH26249-PA
MNRPVKDPIPTTQTRPVISYRARHLSFETRGLTLCRECAYNYILRCNYYCSPFFLYFLFQNLKNQIMTTNVWVEQEWNDY
KLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNKADGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEINVQFFPFDEQTCF
MKFGSWTYDGYTVDLQHLLQSEDSNEIDVGIDLTDYYISVEWDILKVPAVRNEAFYICCEEPYPDIVFNITLRRKTLFYT
VNLIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSLTVPLLGKYLLFTMVLVTFSVVVTIAV
LNVNFRSPVTHRMANWVRVVFIQFLPRILLIQRPKKEEDDDEDEDGNGVGIGANGDADDDGVDDDEDDDDDIEAANGKPP
EGILTDVFHVPETDKYDTYYGKRFSGEYEVPPHGLPPPATRYDLGAVGTVAPCFEEPLPSLPLPGADDDLFGPASPGYAH
EDVSPTFEKPLVREIEKTIDDARFIAQHAKNKDKFESVSVASLSVAMVLDRIFLWVFTVVCVIGTAYIIFEAPSLYDTTK
PIDIKYSKIAKKKMMLMNMGPEED
Swiss-ProtAcetylcholine receptor subunit alpha-like 1
KEGG     K05312     
SUPERFAMILYSSF63712  Nicotinic receptor ligand binding domain-like superfamily     
Gene3DG3DSA:1.20.120.370     
PfamPF02932  Neur_chan_memb; Neurotransmitter-gated ion-channel transmembrane region     
PRINTSPR00254     
ProSitePatternsPS00236  NEUROTR_ION_CHANNEL; Neurotransmitter-gated ion-channels signature.     
TIGRFAMTIGR00860     

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