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Gene detail [Fasta]

Species Linepithema humile
GeneLH23821
Positionscf7180001005066:202348..205494[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH23821
sequence mRNA: 
>LH23821-RA
ATGATATCTTCTTTAATCATCCTGATCCTTTCGGTGGGGATTTGCTACAGCAATCCAGACGCTAAGAGACTTTACGATGA
TCTACTCTCAAATTATAATCGGCTGATTCGGCCTGTATCCAACAATACTGACACTGTTGTTGTAAAACTAGGACTCCGTC
TCTCACAACTGATAGATCTTAATTTGAAAGATCAAATCTTAACGACGAACGTCTGGTTAGAACATGAATGGGAAGACCAT
AAGTTCAAGTGGGATCCCTTGGAATACGGCGGCGTCACTGAACTCTACGTGCCCAGCGAGCATATATGGCTGCCCGACAT
TGTACTTTATAACAACGCCGATGGGGAATACGGTGTGACAACGATGACTAAGGCTGTTTTGCATTACACTGGCAAAGTTC
TTTGGACTCCACCGGCAATTTTTAAATCTTCCTGCGAAATAGACGTTAGATACTTTCCTTTCGATCAACAAACCTGTTTC
ATGAAATTCGGCTCATGGACATATGATGGCTTCCAGATCGACTTAAAGCACATTAATCAAAACGACAAGGGCGATCAAGT
CGAAATCGGTATCGACCTGCGGGAATATTATCCCAGTGTGGAATGGGATATATTGCGCGTCCCGGCGGAACGCCACAAGA
AATATTACCCATGTTGCCTCGAACCGTATCCCGATATCTTCTTTAACATAACTCTGCGACGGAAAACGTTATTCTACACC
GTGAATCTTATCGTGCCCTGCGTCAGCATCTCTTACCTGTCGGTGCTGGCCTTCTATCTGCCGGCCGATTCCGGAGAGAA
GATTGCACTCTGTATCAACATCCTGCTGTCCCAGACCATGTTCTTTCTGCTAATATCTGAGATTATACCATCCACCTCGC
TTGCACTGCCGTTGCTCGGCAAATATCTACTCTTTACGATGATCCTAGTCGGACTGTCGGTCGTGATAACGATAGCTATT
CTGAATGTGCATTACCGCAAACCGAGTACCCATAAGATGGCACCTTGGGTGCGAAAGCTCTTCATCAGAAGATTACCGAA
GCTACTTCTAATGAGAGTACCCGACGATCTGTTCTATGATCTTGCCGCGCACAAAATTTACGGAAGAGGAAGATCAGGAA
AGAAAAGCAAGTTCAATGCTGCTATCGCAGCAGCGGCGCAAGCATCATCGATAGTATCCTCGCCGGATTCCGCTCGCCAT
CAGCGAATTGATGGTTGCAACGGTTTACATAGAACAACTGCTCACAATCGATTCCTAGTCGGCAGTTTAGGATATAATGG
GCTTCCAACAGTTATGTCCGGTCTGGATGAGTCACTAAGCGATGTAACTCCAAAAAAGAAGTATCCTTTCGAGCTGGAAA
AGGCTTTACACAATGTTATGTTTATCCAACATCATTTACAACGTCAAGACGAATACAACGCGGAGGATCAAGATTGGGGT
TTCGTTGCTATGGTTTGCGATCGTCTCTTTCTGTGGATCTTTACGATAGCCTCCGTGGTCGGAACGTTCGCAATTTTATG
CGAAGCACCCGCACTTTATGACAACACTAAACCAATCGATATGGAATACTCTTCTGTTGCTCGACGGCAATTTCTCCCGC
CTGGTCAGGATGCTCCAACAGGAAAATTGCTCGAGACTATCGTGTAG
PEP: 
>LH23821-PA
MISSLIILILSVGICYSNPDAKRLYDDLLSNYNRLIRPVSNNTDTVVVKLGLRLSQLIDLNLKDQILTTNVWLEHEWEDH
KFKWDPLEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAVLHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCF
MKFGSWTYDGFQIDLKHINQNDKGDQVEIGIDLREYYPSVEWDILRVPAERHKKYYPCCLEPYPDIFFNITLRRKTLFYT
VNLIVPCVSISYLSVLAFYLPADSGEKIALCINILLSQTMFFLLISEIIPSTSLALPLLGKYLLFTMILVGLSVVITIAI
LNVHYRKPSTHKMAPWVRKLFIRRLPKLLLMRVPDDLFYDLAAHKIYGRGRSGKKSKFNAAIAAAAQASSIVSSPDSARH
QRIDGCNGLHRTTAHNRFLVGSLGYNGLPTVMSGLDESLSDVTPKKKYPFELEKALHNVMFIQHHLQRQDEYNAEDQDWG
FVAMVCDRLFLWIFTIASVVGTFAILCEAPALYDNTKPIDMEYSSVARRQFLPPGQDAPTGKLLETIV
Swiss-ProtAcetylcholine receptor subunit alpha-like 2
KEGG     K05312     
SUPERFAMILYSSF90112  Neurotransmitter-gated ion-channel transmembrane pore superfamily     
Gene3DG3DSA:1.20.120.370     
PfamPF02932  Neur_chan_memb; Neurotransmitter-gated ion-channel transmembrane region     
PRINTSPR00252     
ProSitePatternsPS00236  NEUROTR_ION_CHANNEL; Neurotransmitter-gated ion-channels signature.     
TIGRFAMTIGR00860     

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