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Gene detail [Fasta]

Species Linepithema humile
GeneLH20410
Positionscf7180001004985:4630891..4635853[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH20410
sequence mRNA: 
>LH20410-RA
ATGTCTTACAGTGATGGCACACGCCCGACACGTAAATTTGGCCCAAAATCGCCAAAGAAACTGTGCGTGACCAAGAGCGA
AAACAGCGACAAGACCACAACAACAGTCAACTGTGGCAGCCATCATCACAATCACTACCATCACAACCATCACCGCTTCC
TGGACGGCACTCAACCGTCGGTGCACAAGCGCAATCTCTACCTTGTTTCATCCCCGCTGATACTACTGTTTAACGTGCTG
CGCACACTGCTGTATCAGCTGTTTGTGGTATTCAGATATTTGTATACCTCTACATCTCAGCTGATCCAGCGCAGGCAGCA
GTCCAAGCAGGCCTGTCACTTGGAGATAGTTGTTGGGCAGAAACCGACGGATGGCCGTTTGGTCAACGGTAGTCAGGCGG
AAAGTGAGACCATCATGTCGCAAGTGCCTAGACGTCCGATCGGGCCAGGCCCTGCAGATCCGTTACTCGCTAAGCAGAAA
CATCATCATCGTAGAGCGTTTGAGTTTATCAGCAAAGCGCTCAAAATTGATGAGGATAATGAAGGACAAAAGGAAATGGC
AATCGAATTATATAAAAAGGGAATAGGAGAACTGGAGAAGGGAATAGCTGTAGAATGCACTGGTGGACACGGTGAGGTAT
GGGAGCACGCCCAAAGACTTCACGACAAGATGTGTACAAATCTGGTGATGGCAAAAGACAGGCTGGAATTCCTCGTGAGT
GTGTGTGAGCTGAGAAAGCTGGGTATCAACAATGAATACCGTACTTCTGGAAATAAAACGGACGGCGAATCGCATCCGGG
AAAGCATCTGAGGGCTCGCCGCAATATACATACTTTTCAAACCACTCGTACCTCACCCAACACTAATTATAATAAGAATA
CGAACAGTACGCACACAACAGTTAACACCGGGCAGGCCATATGTACCCAAATTCCCAAGTTAAGGCCACGCTCACCAAAA
AACTGTTGTGCTCATACTACTGAAGGTATTATTTCAGCATCTGGCAGAAAATTATCGGTCCCCGGAAAGCGAATGACAGG
AATACCTTTGAACAAGAGTCAGACGCTGCCTCGAAGTATGGGCAGATCGACACCTGTTCAACCTTGCCACAGAACCATGC
CTATCAAACCGTCCTCCACTCCACCCTCCGTGAAAAGGCAGCTGTCTGTACCTGGCAACGGCTCGCCTATAAGACGTCCG
GGAACACCTACTACCTCGAACAGTAACAGAAGTACGCCAACCAGAAAAGTACCTGTGTTGAAGGGAGTGGATCCAAAACT
TGCCCAAGTGATTCTCGACGAGATCTTGGAAGGAGGAACGCCGGTGCAATGGGAGGACATTGCTGGTCAAGAGACGGCGA
AACAAGCTTTACAAGAGATGGTGATTCTACCGTCGCTGCGACCCGAGCTGTTTACCGGTCTGCGAACACCTGCAAGAGGA
CTGCTACTATTCGGACCACCGGGAAACGGGAAGACGTTGCTGGCACGTGCCGTTGCGACTCAATGCAACGCGACGTTCTT
TTCGATCTCTGCCGCTAGTCTCACGTCCAAATACGTTGGAGAGGGTGAGAAATTGGTGAGGGCTCTGTTCGCGATCGCGC
GGGAGTTGCAGCCGTCTGTCATCTTTATCGACGAGGTGGACTCGCTGTTGAGCGAACGAAAGGATAACGAGCACGAAGCG
TCCAGGAGACTAAAAACAGAATTCTTAGTTGAGTTTGACGGTTTGCCGTGCAATCCCGAAGAAAGAGTGCTCGTTATGGC
CGCTACGAATAGACCACAGGAGTTGGATGAAGCTGCGCTGAGACGATTTACGAAACGCGTGTACGTCATGTTGCCGGACT
TGCAAACGAGAATCTTGTTACTTCGGAGGCTTCTAGCCAAACACAATGATCCACTGACACCCGAAGAATTGAACGAGATG
GCAATTCTGACGGACGGATATTCGGGAAGCGATTTGACTGCGCTAGCTAAAGATGCCGCACTTGGGTCCATCAGAGAACT
GAATCCAGATCAGGTGAAAGAATTGGACCTCAATTCCGTTCGTAATATTACAATGCAAGATTTCCGCGATTCCCTAAAGA
GAATTCGCAGATCCGTTTCACCGGCAAGTTTAGCCGCCTATGAAAAATGGAGCTTCGAATACGGAGACGTGAGTCTTTGA

PEP: 
>LH20410-PA
MSYSDGTRPTRKFGPKSPKKLCVTKSENSDKTTTTVNCGSHHHNHYHHNHHRFLDGTQPSVHKRNLYLVSSPLILLFNVL
RTLLYQLFVVFRYLYTSTSQLIQRRQQSKQACHLEIVVGQKPTDGRLVNGSQAESETIMSQVPRRPIGPGPADPLLAKQK
HHHRRAFEFISKALKIDEDNEGQKEMAIELYKKGIGELEKGIAVECTGGHGEVWEHAQRLHDKMCTNLVMAKDRLEFLVS
VCELRKLGINNEYRTSGNKTDGESHPGKHLRARRNIHTFQTTRTSPNTNYNKNTNSTHTTVNTGQAICTQIPKLRPRSPK
NCCAHTTEGIISASGRKLSVPGKRMTGIPLNKSQTLPRSMGRSTPVQPCHRTMPIKPSSTPPSVKRQLSVPGNGSPIRRP
GTPTTSNSNRSTPTRKVPVLKGVDPKLAQVILDEILEGGTPVQWEDIAGQETAKQALQEMVILPSLRPELFTGLRTPARG
LLLFGPPGNGKTLLARAVATQCNATFFSISAASLTSKYVGEGEKLVRALFAIARELQPSVIFIDEVDSLLSERKDNEHEA
SRRLKTEFLVEFDGLPCNPEERVLVMAATNRPQELDEAALRRFTKRVYVMLPDLQTRILLLRRLLAKHNDPLTPEELNEM
AILTDGYSGSDLTALAKDAALGSIRELNPDQVKELDLNSVRNITMQDFRDSLKRIRRSVSPASLAAYEKWSFEYGDVSL
Swiss-ProtSpastin
KEGG     K13254     
SUPERFAMILYSSF116846  MIT domain superfamily     
Gene3DG3DSA:1.10.8.60     
PfamPF00004  AAA; ATPase family associated with various cellular activities (AAA)     
SMARTSM00382     
ProSitePatternsPS00674  AAA; AAA-protein family signature.     
HamapMF_03021     
OrthologiGroup-00033    Spastin      

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