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Gene detail [Fasta]

Species Linepithema humile
GeneLH20392
Positionscf7180001004985:4447842..4455042[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH20392
sequence mRNA:
>LH20392-RA
ATGTCCTTTATGTTCCATATGGAAAACACGCAATTAGATGGCGAAGTTCGATTTTCGGAAGCGGTTCATACGTTCAAAAA
GGATACGTTAAAATATGTTTGTACTCTAGATACAACAGACTCTGCTAAAGAAAATTTAACGACTTCCACTTTAGAGAATA
TAAGACTGGCTGCACAAGAAGGTGTACAATCCTCCAGACACATCAATCAACTCGAGACATTTCTCGCGTCTCAGGAGGCA
AATTTGCGGATGTTAAATACGGATATTCTGAATAGCACCGAGATGCTGACTCTCAGCGTGCTCGATCTGAGTCTAACTAC
AGGGCACACGTATCAGATCTCGAGTAATCTCTGCGATGTGGCCATGAAGTACTTGAAATCGTGTAAAACATTTGATGGCA
CGGAATACACGAGTTTGTTTTCAAAAATCTATCAATTGTTTTACGAAAACAAGAGTAATATGTCTGTGACTGATATACTG
TGTGATGCCAGAATTCCATTGTCCGTGAAGGAATGGAGAGAAACAAACGCGATTTGGAACGACTTCGAGAATAATTATTG
CACCTTCAAAGACTTTGAAAGAACGAAGATAGCCGAGTCGCAATCTCACAATAATAATTGTACTCTAGGATTGAAAGTGA
TAAAGAAAATGTCGAATATTTTTAATAACGATCAAAAATATCTTCAAAATATTTATTCTCATTTGCAACTTGTGTGCACC
ATTATTCCGGGAATCAATGATGCTAATACGCAAACAGTGTCTGATTTATTAAAGACGCCGTTGCATCGATATTTCGGACA
CCAGATTTTCGACCTGGAGACGGAGCCGGATAAACTCGAAACGGTCGCTGCCAATTTGCAAGTAAACTTGATGTACAGTA
TTCTTGTAAATGCATGTCCAAACATTTTTTCTTACAACGAAAGGAGCTACAGGAATATCAAGGACTCGGGCTACATTATA
CTGAACCAGAGTGAAGATAAATCGAGTGTAAAGAACGTCACAGTTAAAGGGCCGAACCAATGCGTTTCAGAGATATTGAC
AGAACTCCTGCTGGTTCTGCACAGTGTAAGTTTGGGACAATCTCGCCTAGACAATTCGTGCTTAAAAAATATTTCGAGGC
GTGCGGACGTGCAAACGGTGCTGAGTAAGACGTCGAGCTTCGTTACTCTCGATCTCAGCGAATTATCTGTGGGAGACGAG
ACGCTGACGTTCTTTTTGAATCTCTGGAACATAATGTTCCTTCACGCAAGTTTGGACGTGTGGTCCAACGATCCGCCTGT
CGACAGCTTGAGGCGCGCAGTCACTCTGATGTCGATCGGCTACATGGTCGGCGATCTCGGCCTGGTGACACTCGCCGCTC
TCAGATCCAAGCTGCTGGGCGGCCTAACGAATGACTTTGAGTTTTTCACACGGCTCGAGGAGCTCAACGAATTGGCGTGG
CAAGACTTAGATCTCATGCAGAACCCGAGAGTCATCTTCGCCATGGCTAACGAGCTTTACGGCACGCCTGAGATTCGCGT
GTACGAGACACAGACGTTAAACGAAAGCTTGAACGACGCGGTGCGCGATTATATCACTCATTACTCGTCGGCGTCGCTTG
AGAGTTCTGCAGGTAGCCCGACGACGAAACGGAAGATCAGCTTGCCTCACCTCGTGCGGCAGTATCGTAACGCGTTTTCA
CACAATGCCGAGATCGGTGCGACAAATGCTGACGGGAGTCCGGCTCCGATAGATGGATTCCAAGTATTAAACGAGGATGT
GGAATATATCGCATCCAATTATACGTATGAAGTAATATTAAAATATTCCGAACACAATCTAGTGTCACAATCTAGAATTA
CAGATACCGCGGAAACGTCACTTTGGCAAACTCGAACATTGCGACCTAGCTTGCTGCAGTATCTGGAAAACCATTGTTGG
CTGCTCTCTTATCTTGTACAGAGGATGCACAATGAAAACCCGACCATTTCGGAGAACAGCTGCGACAATATAGAACGCAC
CGCGTGTCTCGAAAATCTCCTCAATTCACCGTGGATTGATAAGCTGAAACCGTTGTTCAAGGACAATCAAACTCTCACCG
CTATGCACGATGGCACGATACCTGCGCAAGAGTTGTGGCGTCATTTTCAACTCGAAGGGGAAGATGGTAATTGGCAAAAC
TCCTTGGAGACTTTAAACGCTTTGGCTGACAGCGTTGTGAGATGCGACACGGAGCTGCAGCGCTTCAAAGATTTAATTCT
GAGTCACGTGCTCTCCAATCCGGGCGTTCTATCTGTCACAAAAATGCTGCAGCATTTGTATCAGATCAAGGATATACATA
TATTGGCGCAGACGATATTGCACAATGTTAACAAGTGGCCCATGAATGTATGCGAGCACGCGTTGCTTCACGCGTTGCAG
CACGAAGATAATCACAAGCTGCCAGCACACTGCAAGCATCGGATGAATGGCGTCTTGTGCAGAATAACGATTTTCCACAA
GATGGTCCCGTACTGCGTGAGTAAATCGAACAGCACGTGGCACGACGTCGTGTATTGCACAGAGAGGGTCGATTCGTTCG
AGATCATCAAGTCCTTGGTCATCGCGGATCAGTACGAGTTGTGCTTGGAATGGCTGGAGTGCCAAGCATTCTCTCTAGAG
ATACAACCCATCGTGATGCAAGACTTTTTGATCGGTCTTTTGAGAAACGAGCAGCAAGAATTTGAGCAAGCTTTAAAGTT
TCTTCAAGCGTTGCCGTCGAGTCAATCGGTGAAGCTGTGCAAGGAAGTTCTGAAAAAGTTGGAATCCACTAGTGCGTTGC
AGTTCGTCGCCAACTACTTACTCGAACACTGCAGAGCGACGGAGCAAGCGAAATATCGGAAGACTTTAGTGGGAGTCGAA
ATCTTGAAAATACTGGAAAGCAAAGACAGAGTGCTATATATCCATTTGATAAGAGAACCGTTGCTAATGTTGGAGCAATT
GTTGATGAATTGTAAATTTGAAAGTATTCAAAAGATTGTGAACACATTACACGAGAGTTTACAGCATCTCGATGTAGGAA
TCCGCAATTTTGACATAATTATACGATTTTACGCCAAGAAAGCGCTCGACTTTCGCGTATCGCTTCAATGCGACAGCGTC
GAGAGTAAAACCAAAAATATTCCACCGGTTAATCTCGATGCGGAAAACAACGAGTTTGTTATGCCTGTTAATGTGCCCAC
TAAGGAAGAATGGGTGCCCAACGATAGGTTATCACGGTCGTATGATAAAACTGTTTCTTCGTTTCAGGCGAGAGAATGCA
GTTGTTGCGAGGCTGTAATATTTTCCATGTTCAATAGACGACACCATTGTCGGCGATGCGGTCGCGTCGTTTGCGCCGTG
TGCTCTCAGCATCGCATGCAGGTCGCCGGTTATCCCAGTTCCGTGCTGGTACGCGTGTGCGACGATTGCAAACGTCAAAC
GGTACTGCAGATGCGCGCAGCGCAAGACGCCCCGTCGACGTCCAGCAGCGAGGTGTTCGATTACTGGCGATTGACGAGAG
ACGAGAAACACAATCGTACGATAAGGGAAGAGTTCTCGTTCGAGTATGCGCCAAATATCTCGCTCTGTCTCGCTATCCTC
AACTTGCACTCCGATCACAAAATGTATACCAGCTTTTTGCTAGACCGTTGCGACGAAATGAAGGAATTGCTCCAACCCTA
TAGCGGTGGCAGAATAAATCCGGAAGTCGATCACGCGGTGATCATCAAAATGATACGCTCTCTATTGGTCGCGGTTAAGG
TGAAATGCGCTAAGCTCGGCTTCAACACCGGGCTCGCGCATTGCGATCGCTTCCTCTCGCAGGTGGATCTCATCGCGACC
CTGGTCCGATCTGATTGTCTGGCTCTCATACCGTCGGACGATTTGGACGAGCACACGCTACGGAAACTGCGCGATCTCCT
CACCGAAAAGGAGCAGTGGACATTAGCGCTGGACGTCAGCACGAAAGCGGGGCTGGATACGCAAGGTGTGTGGGCTGCGT
GGGGAAAGGCTTGCCTGAAGGTGGGATATCTGGACCAGGCGAGAGAGAAGTTTCATCATTGCCTCGACAAAATTGTGGAA
AACGAAGATTTCGGTGATTGGGTTGTTCTATCCAAAGAATCCATGTCTCCGATCAAGACGAAAGAAATACATTTGGATGA
GAAAAGAAGAGCGAGCGAAGCTAGCGGTCATTCGAAGAGAAATGAGCATCTCAAGTGCCGGCCGCTCAAAGATCCACCGT
TACTTACGGAAATTCTGCAAATACTAGATAACTTGAGCGTGCACCGATTCCGAACGCAATATCCGTCTCAGTCTAAACCC
GACGCGGCGCAGGAAATCTTGCAGACGCTCAACAGTCTGAAAGCTGTTAGTCAAAATCAGTTTAACGCTAAATATCTAAT
TCCCGCCAATCAAACGGTTTACTATCAGGAGAATCTGTACTACCTATTGACATACGGAAGCCACAGCTCTATCTTGCAGT
TCTTCCTGAAGCATGTAGAATTCGATAAATGCCTGGCGTATGTTTTGGAGAATGATTTAGAATGCGACTTATTTCTCAAT
GGAGTTTACTTGTATTGCTTGAAGAATGGCGACACCGAGAGGCTTCACGACGCAATGAAGGCGAAGGATTCCGCTCTACT
CATTTGGAGGAAGTACTTGATATCTGTCTGTCACTTTATGGAAAGGAAACAATATTGGCACATCTTGTATCAGATACAGC
TCTTCATGAGAGATTGCGTAAGAGCATCGATGACATGTATCCGTTTTTACATCAATGAGACGAACACTTATTCAGATCTA
CACCACAAGGCGCATCTGTTGCAAGACGCGCAAAAACATTTGGAGTCAGAATTACATATCGAGAGTTTGAGCAAAAGAAG
AAAGAGCACGAGCTCCGTTCAAAGCGACCAGGGTGTTCTGGAGATAGAGCCGTCGAAGATAGACAGGCATATAAATACCA
TATGCAGGCAGATGGAAATTGCGAAATTTCTGGCCAACTGTGAGAGAGAAGAAAGAGCGGCAGCCAAATTTTTAAGCCTC
TTTCCGGACATCGATAGCGATAGCTCTCAGACACCTCAGTTGCCTACATTATTTGGCAATCAACAAGAAAAGATACACTT
GGCTGTTCTAGCTATATTGTGTGGCCGTGACATCGGCGAAGGATTTGGCATAGCTTTTAGAATAATGCAAGATTATAATC
TTCCTCAGCAGAAGGTGTATTCTTTGGCTGGTCATGTGTTAGCTTTAAAAAATAACGTAGCTGCGATTGAGCAATTGATC
AAGTGCTGCCGCAGCTCTGGAACGCCTAATGCCCATATCGTTTCCGATCATGTCTTAACGCATTGCGTAAAATTATTATT
GAGCCGTTCGTATAGCGAACAGAATCCAATTCTTAAAAACCACATAGATACTTTAATCAGACTGATAACTGATACGGAAC
TTAGAATAAATGCGTATATTGAAAGCAAACAATTAAAGGCTGCATATCTACTTGCTGTTAAACATTCTAGAGCGCAAGAT
ATAAGAAGAATTTTGAAAGAGTCAGATAGGCTTGGTCAAAGTGCGATTAAAGCAATATGCTTGAAATGGTTGCAACAAGA
ACCGAAAAAATAA
PEP:
>LH20392-PA
MSFMFHMENTQLDGEVRFSEAVHTFKKDTLKYVCTLDTTDSAKENLTTSTLENIRLAAQEGVQSSRHINQLETFLASQEA
NLRMLNTDILNSTEMLTLSVLDLSLTTGHTYQISSNLCDVAMKYLKSCKTFDGTEYTSLFSKIYQLFYENKSNMSVTDIL
CDARIPLSVKEWRETNAIWNDFENNYCTFKDFERTKIAESQSHNNNCTLGLKVIKKMSNIFNNDQKYLQNIYSHLQLVCT
IIPGINDANTQTVSDLLKTPLHRYFGHQIFDLETEPDKLETVAANLQVNLMYSILVNACPNIFSYNERSYRNIKDSGYII
LNQSEDKSSVKNVTVKGPNQCVSEILTELLLVLHSVSLGQSRLDNSCLKNISRRADVQTVLSKTSSFVTLDLSELSVGDE
TLTFFLNLWNIMFLHASLDVWSNDPPVDSLRRAVTLMSIGYMVGDLGLVTLAALRSKLLGGLTNDFEFFTRLEELNELAW
QDLDLMQNPRVIFAMANELYGTPEIRVYETQTLNESLNDAVRDYITHYSSASLESSAGSPTTKRKISLPHLVRQYRNAFS
HNAEIGATNADGSPAPIDGFQVLNEDVEYIASNYTYEVILKYSEHNLVSQSRITDTAETSLWQTRTLRPSLLQYLENHCW
LLSYLVQRMHNENPTISENSCDNIERTACLENLLNSPWIDKLKPLFKDNQTLTAMHDGTIPAQELWRHFQLEGEDGNWQN
SLETLNALADSVVRCDTELQRFKDLILSHVLSNPGVLSVTKMLQHLYQIKDIHILAQTILHNVNKWPMNVCEHALLHALQ
HEDNHKLPAHCKHRMNGVLCRITIFHKMVPYCVSKSNSTWHDVVYCTERVDSFEIIKSLVIADQYELCLEWLECQAFSLE
IQPIVMQDFLIGLLRNEQQEFEQALKFLQALPSSQSVKLCKEVLKKLESTSALQFVANYLLEHCRATEQAKYRKTLVGVE
ILKILESKDRVLYIHLIREPLLMLEQLLMNCKFESIQKIVNTLHESLQHLDVGIRNFDIIIRFYAKKALDFRVSLQCDSV
ESKTKNIPPVNLDAENNEFVMPVNVPTKEEWVPNDRLSRSYDKTVSSFQARECSCCEAVIFSMFNRRHHCRRCGRVVCAV
CSQHRMQVAGYPSSVLVRVCDDCKRQTVLQMRAAQDAPSTSSSEVFDYWRLTRDEKHNRTIREEFSFEYAPNISLCLAIL
NLHSDHKMYTSFLLDRCDEMKELLQPYSGGRINPEVDHAVIIKMIRSLLVAVKVKCAKLGFNTGLAHCDRFLSQVDLIAT
LVRSDCLALIPSDDLDEHTLRKLRDLLTEKEQWTLALDVSTKAGLDTQGVWAAWGKACLKVGYLDQAREKFHHCLDKIVE
NEDFGDWVVLSKESMSPIKTKEIHLDEKRRASEASGHSKRNEHLKCRPLKDPPLLTEILQILDNLSVHRFRTQYPSQSKP
DAAQEILQTLNSLKAVSQNQFNAKYLIPANQTVYYQENLYYLLTYGSHSSILQFFLKHVEFDKCLAYVLENDLECDLFLN
GVYLYCLKNGDTERLHDAMKAKDSALLIWRKYLISVCHFMERKQYWHILYQIQLFMRDCVRASMTCIRFYINETNTYSDL
HHKAHLLQDAQKHLESELHIESLSKRRKSTSSVQSDQGVLEIEPSKIDRHINTICRQMEIAKFLANCEREERAAAKFLSL
FPDIDSDSSQTPQLPTLFGNQQEKIHLAVLAILCGRDIGEGFGIAFRIMQDYNLPQQKVYSLAGHVLALKNNVAAIEQLI
KCCRSSGTPNAHIVSDHVLTHCVKLLLSRSYSEQNPILKNHIDTLIRLITDTELRINAYIESKQLKAAYLLAVKHSRAQD
IRRILKESDRLGQSAIKAICLKWLQQEPKK
Swiss-ProtZinc finger FYVE domain-containing protein 26
KEGG     K19027     
SUPERFAMILYSSF57903  FYVE/PHD zinc finger superfamily     
Gene3DG3DSA:3.30.40.10     
PfamPF01363  FYVE; FYVE zinc finger     
SMARTSM00064     
ProSiteProfilesPS50178  ZF_FYVE; Zinc finger FYVE/FYVE-related type profile.     
OrthologiGroup-00227    Zinc finger FYVE domain-containing protein 26 homolog      

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