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Gene detail [Fasta]

Species Linepithema humile
GeneLH20172
Positionscf7180001004985:1915016..1919071[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH20172
sequence mRNA: 
>LH20172-RA
ATGGCAAACATACTGTGGCTGTTATCAGCGATTATAGCGAGCACGTTAACTATTGGCACGTGTATGGACGAAGATCTCAG
CAGTACGATCAAGTTATTAAAGGAGCAAGTGGGTGCCCTTCTGGAACATCGACAAGAAGATTATAATGCTCTGGAAGAGA
GCCTGAAGCGAGCGATGGAGAAAAACACAGAACTTATGGAAGTAAATGCTCTTCGCGGCGGAAGCGGCAATGAAGCAAAG
AACGAGCGATTGCGCGTGCGATGGCTCGGTAGCGCTGTGACGGAGCTGCAAAGCGAGGTCGCCGAGGTGCTCAGGACGCG
GAACGCGAGCGAGGAGTTGGCCGAACGGTCGAGGATGCGGAGCGAGCTGGCCTTGCTGAAGGGCGACGTCGCCGAAGTCG
GTAAAAGCATACGCGATCTCGGCGGAAGAATCACCATGATAGAAGCCACCCTCGGTACCATCAGGCTCGACATTGCAGCG
ACCAAGGAACGCACCAGCCTCATATCTCGTTCCTGCGCAGATGTCAGTAGTCAGCTGAGCACGGTGCAGATCGAGCTGAA
GTCCTTAAAATGTGAGCAAAAGCCAGAACATCGGCCGAACAAAGCTGACATCTTCCACAATGAGGTGAGGGGATCGCATG
AGATTGGGTCGATCCGAAGGCACAGCTACTATTCCCACGCTCTATCCCATCGTGCACGCTTGGAGGACCGTCTACGAAAT
GTCGAGCGGAAAATCTCCATTGTAGCGCGAAAACGAGCGATGGTCGAGAAGCGAGTGGTATTTGAGGATCACGAACATCT
CAACGAACGGATGAAGAGTCTCGAATTGGCACAAACCGAGCTCTCGAAGAAGGTGTCCAACGCTAGCCGGGACCTGGTGT
CGATGAACGAGCTGGACGAGTCAATGGTGCGACTGTACGATTCGGTGCGCTTACTCGAGGAAGCCGTCTACGTCAATCGC
TCGGAAGTAAAGCGAGAGCTGGCTAGACTGGAGATAAACGCAGCGCGAAAGGCAGCCGAGCTGTCGCTGACCAGGGAGGA
GCTGAGCAATCTTCGACGCGCGGTACAGGCGCTGAGCGTGAGCGCGTCGCAGTTGCAGGAGAAGAGTGACGCGCAACGGA
AGGGTCTGGACATCCTGAACGAAACTCTGAGCCGTCTGGATTTAACGCAAAATCTGGCCAAGGCGGTGAACGTCACGCAC
GAGTTGGAACAGGTGGAGGATCAGTATCGTCTTATGGTGGACTCTCTTCCGGGCAACTGCGAAAAGCGCAATGGTTTGAC
TCTGTTAGCGCCCGGTCCCGGGGCGCCCTTACTAGCTTCCTGCCACGACGGCTCGATCGTTGTAGCCCGCAGAATTGACG
GCGCGATGGATTTCGATCGCAGCTGGAACGAGTACTCGATCGGCTTCGGCTCTCCGGTCAGCGAATTCTGGATCGGCAAC
GAGGCGCTGCATCGGCTCACTCGCGACAACTGCAGCAGACTGCGAGTCGATCTGACCGACACTTACGGCGTGCACTGGCG
TGCCGAGTACGAGCATTTCACCGTCGACTCTGAAGAGACCGGCTACCGGCTCCATGTGTCCGGTTATTCGGGCAACGCAA
CCGACGCGCTCTCCTATCAGGATGGAATGGCGTTCAGCGCCAAAGACCGCGATATGGATATCAGTACCACCGACTGCGCG
GCCAATTACCGCGGTGGATGGTGGTTCAGCCATTGTCAGCATGCTAATCTCAACGGCAGATACTCTTTGGGTCTGACGTG
GTTCCAGTCGAATACAAATGAATGGATGGCAGTTGCGTCCTCCGAGATGTTGGTGCAACGGAAGCAAAACTGTTGA
PEP: 
>LH20172-PA
MANILWLLSAIIASTLTIGTCMDEDLSSTIKLLKEQVGALLEHRQEDYNALEESLKRAMEKNTELMEVNALRGGSGNEAK
NERLRVRWLGSAVTELQSEVAEVLRTRNASEELAERSRMRSELALLKGDVAEVGKSIRDLGGRITMIEATLGTIRLDIAA
TKERTSLISRSCADVSSQLSTVQIELKSLKCEQKPEHRPNKADIFHNEVRGSHEIGSIRRHSYYSHALSHRARLEDRLRN
VERKISIVARKRAMVEKRVVFEDHEHLNERMKSLELAQTELSKKVSNASRDLVSMNELDESMVRLYDSVRLLEEAVYVNR
SEVKRELARLEINAARKAAELSLTREELSNLRRAVQALSVSASQLQEKSDAQRKGLDILNETLSRLDLTQNLAKAVNVTH
ELEQVEDQYRLMVDSLPGNCEKRNGLTLLAPGPGAPLLASCHDGSIVVARRIDGAMDFDRSWNEYSIGFGSPVSEFWIGN
EALHRLTRDNCSRLRVDLTDTYGVHWRAEYEHFTVDSEETGYRLHVSGYSGNATDALSYQDGMAFSAKDRDMDISTTDCA
ANYRGGWWFSHCQHANLNGRYSLGLTWFQSNTNEWMAVASSEMLVQRKQNC
Swiss-ProtProtein scabrous
SUPERFAMILYSSF56496  Fibrinogen C-terminal domain-like superfamily     
Gene3DG3DSA:4.10.530.10     
PfamPF00147  Fibrinogen_C; Fibrinogen beta and gamma chains, C-terminal globular domain     
SMARTSM00186     
ProSiteProfilesPS51406  FIBRINOGEN_C_2; Fibrinogen C-terminal domain profile.     
CoilsCoil
ProSitePatternsPS00514  FIBRINOGEN_C_1; Fibrinogen C-terminal domain signature.     
OrthologiGroup-00667    Protein scabrous      

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