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Gene detail [Fasta]

Species Linepithema humile
GeneLH20101
Positionscf7180001004985:1066882..1070381[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH20101
sequence mRNA: 
>LH20101-RA
ATTCCATCTGATCAACAAGGAGATGGTCCTGAAAAAAAGATCACGCGGCTGGCAATAGGAACAGTCGGTGGATTCATGCC
TGATCAACAAAAATATACTTATGAAGAGGCCTATCAGATTGTCATTTTACCAAATTTTGTAAAGATTGATTATCCTGAAG
GCAATTTGCCTCATAAGGTGGAACAAGCAGTGGAAGCTATATTACACATGGAGGGAGCATGGGCAGCAGCACAGATAGCA
CATACATGGGACGGAGAAGTTAGAGCGAAGTCGAAACATGCTGCAAATCTGAAGCAGCTGGACAATGGCAAAAAGATACC
ACCGAGCGGTTGGAAGTGTGAAAAGTGCGACCTCACACAGAATCTCTGGCTAAATCTGACTGATGGCAGTATACTTTGTG
GTCGTAAGTTTTATGACGGAAGCGGCGGCAATGGCCACGCAATGGAGCACTATCGCACAACTAACTATCCTTTGGCGGTG
AAGCTGGGCACGATCACTAAAGGTGGTAAAGCCGACGTGTACTCGTATGATGAGGATGACATGGTGGACGATCCAAACTT
AGCAATTCATCTGTCGCATTGGGGCATCAACATCTCACAGATGGAGAAAACGGAGAAGTCGATGATCGAGCTGGAACTGG
ATCTAAATCAAAAGTTTGGCGAATGGGTGTCCCTCCAAGAAGCCGGCAGTAAATTGACACCGTTATACGGTCCCGGCTAC
ACCGGCCTGACTAATTTGGGAAATTCCTGTTACCTGAATAGCGTCATACAAACATTATTCATTGTTCCGGATTTTATTAA
TAAATATGTCGACAAGGCGCCCGAGATATTTCAAAACAATTACTACGATGCACCGTTGAATGTTAACGTTCAAATGGCAA
AATTGGGAGTTGGTTTGCTCTCCGGCAAGTACTCCGAGCAGCCGAGCAAATCTGGTACAGACGACGAGTCGCGGCAAGGT
ATTCCCCCAAGGATGTTTAAGGTCCTGATCGGTCGCGAGCATCCTGGTTTTTTCTCGAATCGGCAACAAGACGCTCAGGA
ATTTCTCCTTTACCTCATTAACTTACTCAATCGCAACAGTCGGCACGAGGTATGCCCAACAGAATGCTTCAAATTTAAAG
TGGAGGAAAGATATCAATGTGGCAAATCTAAAAAAGTTAAGTACACTTATCGGCCGGAATACATTCTGCCGCTGCCAATA
CCGCTGGAGGCTGCAGTGAACAAGGATGAAGTGGCTGCTTATGAGGCTCAGAAGAAGGAAGCCGAAGAGAAAGGACAGAA
GCTAGATTCCAATACTCTTGTGAGACCCCGTATAAAATTGTCGTCATGTCTGGACAGTTTCATTCGTTTGGAAATTGTGG
AACAGTTTTATAGTTCAGCGTTGAACGCGAAAACAACGGCATTTAAAGTGACGAGACTGGCCAGTTTCCCGGATTATTTG
CTGATTTACTTGAAAAAATTCACAGTTAAGGAAGATTGGACGCCCATCAAATTGGATGTGGCAGTAGAGATGCCGGATAC
GGTGGAGTTGAACTTTCTGCGCGGAAACGGTCTGCAGCCCGACGAGAAATTACTGCCGGACGGCGCACCGCCGCCGCCAC
CGGTTTACGACGCGGTTCTTCTGAATGAACTGACGGACATCGGCTTCCCGCTGAACGCTTGCAAGCGTGCCTTGTACTTC
ACAGAAAACAGCAACATCGAGGCTGCAACGGACTGGTTGATGGAGCACATTTCGGATTTCGACTACAACGAGCCGTTTAT
ACCACCAGGAGTTGATATTAAGCCAAGCGACGATAAGTTTGAAGCGGATCAAGCTGCTTTGGAAATGGTAATGGCCATGG
GCTTTACACGGGAGCAAGCAACGAAAGCGCTCAAGGCGACTAACAATAATTTAGAGCGTGCGGCTGATTGGATTTTCAGT
CATCAGGCAGAACTTGATGCCCAGGAAGTAGATCCTACGGATGGGACTCGGATAGGAACGAATACCCCGGCTGAAGAAAC
ATTCAAAGACGGAAGCAGTCGATATAAACTAGTGGGCTTTATATCGCATATGGGTACATCGACGATGGTAGGCCATTACG
TTTGTCACTTACTCAAGGAAGATCGATGGGTGATATTTAATGATGAAAAAGTCGCTTTGTCGGAAAATCCACCGAAAGAA
TTGGGATACATATACATGTACCAACGAATCAATAATTAATATATACTGTTTTGTATAAAGATGTTCAATAATAAAATACG
ATGCAAATGCTCTTC
PEP: 
>LH20101-PA
MPDQQKYTYEEAYQIVILPNFVKIDYPEGNLPHKVEQAVEAILHMEGAWAAAQIAHTWDGEVRAKSKHAANLKQLDNGKK
IPPSGWKCEKCDLTQNLWLNLTDGSILCGRKFYDGSGGNGHAMEHYRTTNYPLAVKLGTITKGGKADVYSYDEDDMVDDP
NLAIHLSHWGINISQMEKTEKSMIELELDLNQKFGEWVSLQEAGSKLTPLYGPGYTGLTNLGNSCYLNSVIQTLFIVPDF
INKYVDKAPEIFQNNYYDAPLNVNVQMAKLGVGLLSGKYSEQPSKSGTDDESRQGIPPRMFKVLIGREHPGFFSNRQQDA
QEFLLYLINLLNRNSRHEVCPTECFKFKVEERYQCGKSKKVKYTYRPEYILPLPIPLEAAVNKDEVAAYEAQKKEAEEKG
QKLDSNTLVRPRIKLSSCLDSFIRLEIVEQFYSSALNAKTTAFKVTRLASFPDYLLIYLKKFTVKEDWTPIKLDVAVEMP
DTVELNFLRGNGLQPDEKLLPDGAPPPPPVYDAVLLNELTDIGFPLNACKRALYFTENSNIEAATDWLMEHISDFDYNEP
FIPPGVDIKPSDDKFEADQAALEMVMAMGFTREQATKALKATNNNLERAADWIFSHQAELDAQEVDPTDGTRIGTNTPAE
ETFKDGSSRYKLVGFISHMGTSTMVGHYVCHLLKEDRWVIFNDEKVALSENPPKELGYIYMYQRINN
Swiss-ProtUbiquitin carboxyl-terminal hydrolase 5
KEGG     K11836     
SUPERFAMILYSSF54001  Cysteine proteinases superfamily     
Gene3DG3DSA:1.10.8.10     
PfamPF00627  UBA; UBA/TS-N domain     
SMARTSM00165     
ProSiteProfilesPS50271  ZF_UBP; Zinc finger UBP-type profile.     
CoilsCoil
ProSitePatternsPS00973  USP_2; Ubiquitin specific protease (USP) domain signature 2.     
PIRSFPIRSF016308     

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