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Gene detail [Fasta]

Species Linepithema humile
GeneLH12483
Positionscf7180001004609:25798..30985[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH12483
sequence mRNA:
>LH12483-RA
ATGGATCCCGTTGGTCCATGGTACGCATACAATCGTATTACCGTGGGCAGTGCCACTGGGACATTTCAAGCAGCAACACC
AACGACATCCAGTGATTTTGTCTCCCATCATTTAACAACAGCTGCTACACAGGCAGCGCCATCAACAACGACGTCGCAAT
TGCTTCTACAAGCAGCCCATACAACAGCAACTCTGGCGGGTCAACCGTCCCCTTTTAATCCGGGGGGATTTCTATCTCCG
CCCCCCGTGGGTTACGACGTTTTCACTCCTCTGTTTCCCAATGCTAAACAGGCGCATTATGTTACTCAACATAGGCAAAC
TCTCGTTCAAGCGCAAACGGTGTCGGTGACGAAGCAAAACACCACAACGGAGTCTGATATTCCTGCGTTGAGAGAGAATT
ATAGCACCGCGCATCAAGCTACATTCTTTGAACAACAAGGGGTGCCGACGTCGCCCACGGCGTCAACATTGGCCTGGACA
CATCAGAATAATACACAGCTGCCTAGCCCGTTCGGCATTTTGCCACATGAGAGCGTTGTTCCTTCGTCCCCGGGCGCGCC
GTCAACGAAATCCAGCGGCACCGGCTACGAGAACACTTTCAATACCCATTTCAACACGCAGACCATAAATAATATCAATG
CTTCCCAGTTAACTAGTTCGTCTGCGTGTAGCGCAGATTTTAAGACATCCGGTTGTCCGACCGACGCGAAGAAATCAGTC
AATGTAAGATCACAATCACCTACCGTCAGTGTAAAATCCGTGATTCCCACGTCGCAGGCCAGTAGCAGTCAGACGTTCTT
CCATCAAGTTCCGACGACTTTTAGTTCCGAGAACTTGACGAGCACTTATCCAAGTGCGAGCAATGGAAGCCAATCCATTG
CCGGAAACGGCAAGGTGCAATCGTCGCTGCAGCATCAGCAATCGTGCATCGTGTCGACACCGAGCAATAATGCCTCGGGT
AAGGAATACAGAATACCGCAGCCGCCGTCGAGGTCAGTCGTGTCGACGACGGTTTTTTTGAGTGCCTCCGTGCGATCAGG
CTCCACGCAAGCGATTCAGGACAAACAGGGAACGCGCAACGGCAATTTCACGTCGCCGCCTAACAAAGCGGTCACCAACG
CCGCTCAGCAAAATATTCAGTCCAAGGCGCAGGCGAAGATCTATTCGGAATTGGGTAGCCACGGAGGTGTCGAGCATCGA
AGAAACGAGCAACAGGGGCATGATAACAACTGCAGCGTTGTTGTTCCCCGACGACCGAGTCCTTTGCAAGCCCATTCGCA
GGCCAGTCCCTTGGGCCACGTTCCGAGTCCGGCGTATCCCATGTACAATAGTCCAATGGCGACCATGTCGTCGCCGTCGC
CGTTGCAACAGCATACCGAAAATAACAGCAATCAATGTGCCAGCGGCACATCGTACAAAGGCGGAGTTCAGCAACAGGTT
ACTCCGTCGTCACCTCTTGACGTCACCGTTTCTAGACCGGCGTCCCAGGGACAGGTCGCGTATTCGTCGGTGATTACGCG
CGCGTTGGGCACCACAGAGAACAACAAAACCGCTTACAACGCTGAGGGTAAAACGTACGACAGGCAGCAGCAGGATTTCT
CGCAGACGCAGAAGCAGCAAGTCTGCTGGGAGAGTGACAACCGGCAAACGGTGAACGATAACAGGAAGTTTGCCGTTTAC
AGCGGCACAAATGCGACCGCTGGCGACATGAATGCGCAGAGCTTGCCGGTTCAGCAACAGGTGCAAAGACTGATAAACGT
TGCGGATAGACAGCAGCCGTATTTCGAGGCTAATCAAGTGGCGCTGCAGGACTTGAGCAGCTGCCGGGGAGACCCGATGA
GTATTGTGAAGAACTTGCAGACGTTGCAACAGAGCCCCTGTCAAGTGCAGCAGCACACGACCGCTGCTATACCGACCAGT
ACGACAGAGCAACAGAAGCAGGCTGAGGAACGGCGAAAAGCCGACAGTGCTAACAAGAAGAGGAAAAGTTTGGAGAAAAG
TGTACACAATACGCCATTGGCGAACGAACTTACGGGCACTGCGACGATGACGGAATACCTCAATAGGATACCACCGCCGG
CTCACCACAACGCGGTTAATCAACAACAACAGAACGGTTACTTCGAGTTCGAACGGTGGCCGCCCTCACCCGCCAAGATG
TTCCCCACTGCGTCCGGCGCCTTTAGCTCTCAGTCGTCACTGCACCATTCGACTAATTTTGTGGGCACCCCGGCACACCA
GCACCAGACGCTAATGGTGTCGCATCATCACGCGCCGCCGCCTCTCCCATATTTTCCGGCCTTCCATATTCCCGCGGGTC
ATCATCCACATCACCCACACGAATTCCAATCCTCGGTCGAGATAACGCCGATAGGATTCGAGAATACCGCGAATCAAAAC
ACCAATTACAATCAAGAAGTCAAAGACGACCAGCCTAAAGTGATCGTTCCTAATATCGAAGAGGAGCTAGGTTTCCTTAA
GCAGGATCAGCAACTGATGCCGAGCGCGAATCAAATGAACAAAGACTTTAAACGGCCCAATCGAGACCCGAATACAGGCT
TTATGACGAGCTACTTAAAGTTTCTGCAAGGTGAAAGAGATCCCTCTCCGCCGCCTGCTATACGCGGTGGCAGAAAGGCT
ACATGGAACAGGTCAAAACCGTATATACCCGTTGAGTCGAATAAACCTACGGAAGCTTTAATTAACGGCGAAACTACTAA
ACCCCAAGAAAAACCGGCGCCGATTAAGGAAACATCGGTTAAGGAAACACCTGTAATAGATTACGCTAATGATCCTAGGT
ACTTTCCATTGCCGAAGGAGAGAAAAAAGTCAAACTTTGATTCGAGTGACGACGGATTTACTAGTGACGATGACTTTCTG
TTTGCTCCTAAGAAAACTGAGAAGAAAGTGCAGAACGCAAGTAATTCTAGTAATACTGAAGTTGTTACTGTGAAATCAGA
AGGAAAAGGTAGGAAAGGTCGGCCTATTAAGCCCGGTGGACCCACAGATAGAAAGAGAAGAGCTGCTGCAGCGGCAGCGG
CGGCAGCAGCGGTAGCAGCAGCAGCAGCGGAAACAGAGAAAAAGTCTTCAAAGAAGGCTGAAGAAGCTTTGAAAATATGT
ATATCTTGCACAGTAGATCCTTTACTCCTTCCTCCCAGACGTGAGACATCGAGAAGAAAAGCGAAAGAAAAGACCTCAGT
GAAACAATTTCTGGATCGACAACAGGGTATAGATTATTTCGATAATGACGAGGAACAAGTCGATTCCGATTCAGATCCAG
CGTGGACTCCTGCTGTAAAATTGATCGGGGAAGAAGAAGAAAAGAGAAAGAAACGTGGTAGACCTGCTATCACAAAAAAA
ATTAGGAAGATCTTGGAGGAAGATGGATATTCGTCTGGGGAAGCTATTGTTTCCAAAAAATCGACAAGGAAAAAACACGA
AATGTCTTCAAAAAACTTTAATAGTTCTGGCAAAGTTTCTTCTAAGAATGATGAAAAATTAGCAGCGGCAGCAAGCGACG
AAGATATCGATATCTCACCATTTAAGTCTGGTGAATTTGTTGTGATCAAGACAGATTTGATTGAAGAATATCCCCCTCTT
TGGAGAATAGACGGCAAAACGTTACTCCAGAAATATGAACCATTCAAATCCAATGGAAAAACTTTATACAGAAACATATC
TACGTATTCTGCATGGGTTTCACAAAATCGACATATATATCAACAAGTTCCTGTGAAATTCTGGCAGCAAGGCAAGATAG
AAACAATTGTGGAATTCTTGAGAGATGAGATGATCATTGATGATAGCGAGAACATCATTAAATCTATGAAAGATACCGAA
AAGTATCAAGATAATTTTGAAGTTTATATACAGACATTGATCTCGCAAGCTTTGGATTCGAATTTTCTTACAGAAATATT
ACAAGAACAAGATGATTACTTCCTGTCAAATGTTAAGATTGTCGATGAAGTAACAGAGGAGAGGAAACGTCGTCTCTTGT
TCACGACTAAATGGAAACCGAATGTTGTGACAGCAATATCAACATGGCCGTGTGTTGATGTGCTTAAAGATCTACCGGCA
TCGGAATATAAAGGGAAATCTTGCGCTGGTTGTCAACAGACAAAAATCTATGCGAGAGTTCTGCTTTATGGACAGCCATA
TAATAGTACTACATTGGAAGGCTCACCTCCTGATCCAAGAGCACCTCACGACAAAGTACGATATATAAATATATATAATA
TAATATAA
PEP:
>LH12483-PA
MDPVGPWYAYNRITVGSATGTFQAATPTTSSDFVSHHLTTAATQAAPSTTTSQLLLQAAHTTATLAGQPSPFNPGGFLSP
PPVGYDVFTPLFPNAKQAHYVTQHRQTLVQAQTVSVTKQNTTTESDIPALRENYSTAHQATFFEQQGVPTSPTASTLAWT
HQNNTQLPSPFGILPHESVVPSSPGAPSTKSSGTGYENTFNTHFNTQTINNINASQLTSSSACSADFKTSGCPTDAKKSV
NVRSQSPTVSVKSVIPTSQASSSQTFFHQVPTTFSSENLTSTYPSASNGSQSIAGNGKVQSSLQHQQSCIVSTPSNNASG
KEYRIPQPPSRSVVSTTVFLSASVRSGSTQAIQDKQGTRNGNFTSPPNKAVTNAAQQNIQSKAQAKIYSELGSHGGVEHR
RNEQQGHDNNCSVVVPRRPSPLQAHSQASPLGHVPSPAYPMYNSPMATMSSPSPLQQHTENNSNQCASGTSYKGGVQQQV
TPSSPLDVTVSRPASQGQVAYSSVITRALGTTENNKTAYNAEGKTYDRQQQDFSQTQKQQVCWESDNRQTVNDNRKFAVY
SGTNATAGDMNAQSLPVQQQVQRLINVADRQQPYFEANQVALQDLSSCRGDPMSIVKNLQTLQQSPCQVQQHTTAAIPTS
TTEQQKQAEERRKADSANKKRKSLEKSVHNTPLANELTGTATMTEYLNRIPPPAHHNAVNQQQQNGYFEFERWPPSPAKM
FPTASGAFSSQSSLHHSTNFVGTPAHQHQTLMVSHHHAPPPLPYFPAFHIPAGHHPHHPHEFQSSVEITPIGFENTANQN
TNYNQEVKDDQPKVIVPNIEEELGFLKQDQQLMPSANQMNKDFKRPNRDPNTGFMTSYLKFLQGERDPSPPPAIRGGRKA
TWNRSKPYIPVESNKPTEALINGETTKPQEKPAPIKETSVKETPVIDYANDPRYFPLPKERKKSNFDSSDDGFTSDDDFL
FAPKKTEKKVQNASNSSNTEVVTVKSEGKGRKGRPIKPGGPTDRKRRAAAAAAAAAAVAAAAAETEKKSSKKAEEALKIC
ISCTVDPLLLPPRRETSRRKAKEKTSVKQFLDRQQGIDYFDNDEEQVDSDSDPAWTPAVKLIGEEEEKRKKRGRPAITKK
IRKILEEDGYSSGEAIVSKKSTRKKHEMSSKNFNSSGKVSSKNDEKLAAAASDEDIDISPFKSGEFVVIKTDLIEEYPPL
WRIDGKTLLQKYEPFKSNGKTLYRNISTYSAWVSQNRHIYQQVPVKFWQQGKIETIVEFLRDEMIIDDSENIIKSMKDTE
KYQDNFEVYIQTLISQALDSNFLTEILQEQDDYFLSNVKIVDEVTEERKRRLLFTTKWKPNVVTAISTWPCVDVLKDLPA
SEYKGKSCAGCQQTKIYARVLLYGQPYNSTTLEGSPPDPRAPHDKVRYINIYNII
PfamPF13926  DUF4211; Domain of unknown function (DUF4211)     
CoilsCoil
OrthologiGroup-00511    Proline-rich protein     

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