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Gene detail [Fasta]

Species Linepithema humile
GeneLH22023
Positionscf7180001005017:1407519..1411885[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH22023
sequence mRNA: 
>LH22023-RA
TGGCCGTCAGTCTGGGCGGCGGTTCAATACTCCTCATCGGCGAGCCGGGAAACATCGCTGGAGAATGGAAATCGGCGGAC
CGGAACGACGATCTGCCGCGGAGGACCCAAGGCTTGGTGCAGTTGCGCGTCGTCAATTTCAACGAAGATGTGGACATCCA
GGAGACGTCGTGTTATGTCCACGAAGACAACGTTTCCGATGATAGCACATACGAAAGCCTGTACTCCTGCCAGCCGGATG
ACTTAAGTAGTGATTCGGAAACGGAAACGAACAGTAGTATCCAACACAACGTCTCAAATAATAGTGTGATCAACACTTCT
CTGGAATGTCCTACGAGACCAACTCCACCACCGCCGAGGGAGGCCAATCATTACAGCGTGCTCGCCGATCAAGAACCTCT
CTATCAGTTTTACGCAGCTGCAGTGGCTCGTGTCGCTTTCGAATCGGATTCCGAAGGCTACGAAGAGGTGGAAGATATGA
TGTTGAAGACGGAATCAACCGCGACAAATCTTTCCAGATCGGGACAAAGAATGCTATGGTGTCATACTCCACAAGTAATG
AACAGTGATCTTTTGCAGAAACTAACACCGGAGGAGAAGAAGATTCAGGAGGCGAAATTCGAGATTCTGACCTCCGAAGC
GTCGTATTTAAATTCTCTTCGAGTCCTAGAGAACGAGTTTCTCAATAACCATACATTAATGAATGATATTCTAACACCAA
TCGAGAGAAAGAAATTATTCGGCGGCGTGCCGAGCGTGTTGTCGGCGTCGCAAACGTTTTTAGCTGAACTGGAAGCTGTG
TGGAGAGAAGATCCAATGTTACTGGGTTTATCAGAGGTCTTGTTGAAACACGCAGAAAAATGTCAGGCCACGTACGTGAC
GTATTGTTCAAATCAAGTCAGCATTGACACGACTTTGAAAGAACTCAAAGCTCGGAAAGGCGTAAAATTCTTGGAGGCTA
TCAGACGCATAGAGATGCGACCGGCGTGCCAAAATCTATCTTTGCATTCTTTCCTAATGTTACCAATGCAGCGTGTTACA
AGGTTACCTTTATTAGCCGATGCCGTTCTTTCCAAACTGTCAATGGGGAATTCGGATAGAGCGTCTTGGGAAATGGTTTT
ATCGACTTTGAGCAATGTCGTTGCCGAATGCAACGAAGGTGCTCGAGCCGCTGCTCAAGAAGCTGAAATGGAAATTTTAG
CAAGGAAACTAGAATATTCATCGAAAGTTAAACCTATTGTGCTAAGAGGCAAACACCTAGTTAGAAGCGGGTCAGTCGTA
CAGTTGTCAACAAAATCGGACACCGAATACAAACTGACGTTCGGAAAGAAATTTAATAAGACGCCGCTCTATCTTTTACT
ACTTACTGATTATCTTCTAGTCACGAAATTGAAATCCAATGCTCATGACGAGTGCTACAACGTTATAGACGCGTGTAAAA
GGAATCTACTGGCCTTAGAACCAGTTTCTGAAGAATCGCCATTTGCCGGACGGAACGCTATGATACTGACTCTTTTAGAG
AACCATTCCGGTCGCCATGTAGAGTATGTCTTTATGTGTGAGAATAATACAGAGCGAGAACGATGGCTGGAAGCTGTCTT
ACCACCCAAGCGTGGCTTAGTCGGTGAAACGTTATACGAATCCTGGGATTGCCCACAAGTAATGGCTAAGTATCTGTATT
CGCCAAATCAACCAGACGAGCTATCATTACAGCCAGGGGATGTGATAAACGTACTGAGAAAGATGGCAGATGGTTGGTAT
CATGGTGAGAAATTATTGGACGGTGAGCAGGGATGGTTTCCGGCGAATCATACGAAAGAGGTTGCATCGGAGCATGTCCG
TGCGCGTAATCTGAAGCAACGACACCGTCTTCTAGCACTTAGCAATAGCGTAATACAACAAAGAAGGGCGAAACAGAGTC
AAGGTACTCATT
PEP: 
>LH22023-PA
AVSLGGGSILLIGEPGNIAGEWKSADRNDDLPRRTQGLVQLRVVNFNEDVDIQETSCYVHEDNVSDDSTYESLYSCQPDD
LSSDSETETNSSIQHNVSNNSVINTSLECPTRPTPPPPREANHYSVLADQEPLYQFYAAAVARVAFESDSEGYEEVEDMM
LKTESTATNLSRSGQRMLWCHTPQVMNSDLLQKLTPEEKKIQEAKFEILTSEASYLNSLRVLENEFLNNHTLMNDILTPI
ERKKLFGGVPSVLSASQTFLAELEAVWREDPMLLGLSEVLLKHAEKCQATYVTYCSNQVSIDTTLKELKARKGVKFLEAI
RRIEMRPACQNLSLHSFLMLPMQRVTRLPLLADAVLSKLSMGNSDRASWEMVLSTLSNVVAECNEGARAAAQEAEMEILA
RKLEYSSKVKPIVLRGKHLVRSGSVVQLSTKSDTEYKLTFGKKFNKTPLYLLLLTDYLLVTKLKSNAHDECYNVIDACKR
NLLALEPVSEESPFAGRNAMILTLLENHSGRHVEYVFMCENNTERERWLEAVLPPKRGLVGETLYESWDCPQVMAKYLYS
PNQPDELSLQPGDVINVLRKMADGWYHGEKLLDGEQGWFPANHTKEVASEHVRARNLKQRHRLLALSNSVIQQRRAKQSQ
GTH
Swiss-ProtEphexin-1
SUPERFAMILYSSF48065  DBL homology domain (DH-domain) superfamily     
Gene3DG3DSA:1.20.900.10     
PfamPF00621  RhoGEF; RhoGEF domain     
SMARTSM00326     
ProSiteProfilesPS50002  SH3; Src homology 3 (SH3) domain profile.     
OrthologiGroup-00105    Rho guanine nucleotide exchange factor     

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