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Gene detail [Fasta]

Species Linepithema humile
GeneLH21962
Positionscf7180001005017:873419..878743[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH21962
sequence mRNA: 
>LH21962-RA
ATGTACAGTAATAACATTGACCCTTGGGAGCCTGGCTACGGGCCGGAAAGAAGAAATCACAATTCTGACTATGACTATCG
AAGTGATTATGGAAGCAATAGATCGCCCGAGTATTCAGAGCATCGTGATGTAGATCATCGTGATAGAGATCATCGTAGTC
CAGATTACAGAAATCATCGTGGAAGAGACAGAGATCGTGAAAGAGATCGCTCGAGGGATAGGAGAGATCGTAGTAGAGAC
GACCGTGATCGCAATTACAGGGATCGCGAAGATCGTTACGGAAGACAAAGGGATAGAGACTCTGTAGAAAGGGACAGGGA
CAGAGATAGGGACAGGGATAGAGAAAGAGACCGCTCCAGACGTGACAGGGATCGGGATAGGGATAGGGATCGTAGGGGGA
AACGGGATGATCGGGATCGTGATCGCGATGATGATCATAGTCGGGAAAGTTTGGACTTTGAGCACGACCATGGTCGTGCT
TATAGCTCATCCATGGAAGGAATCCACTACAAATCGCAATCGCCCAACAACACCATAATGATACGTGGGCTCGCTCAACA
TATTACTGAAAATGACGTGCGGCAAGATATCCTCAATTGTGGTCTAATGCCCAAGGACATCAGGCTTATACGAAAAAAAG
ATACAGGTGCTTCGCGAGGTTTTGCATTCGTCGAGTTTAACGCGACTCAGGAGGCCGCACGGTGGATGGAGATGAAACAG
GGAGTGCTGATGCTGCAGGACCAATACCGCGCATTGATGCAATACAGTATACCGAAAGAATGCCATGTGGATAAACCACC
GGCGAAAAATACGCAGGATTGGCATTGCGTGAAGTGCGGAGCGCATAATTTCAAACGGCGCGAGACCTGCTTCAAGTGTT
CCGCTTCGCGCGCGGAAAGCGAGGAAGGCGGAGAGGGTAGCGACGAAATCAGCCCGCATCCCACCAACACCGTACTCTTA
CGCGGATTAGATGTATTAACGACCGAGGACTCGGTTCTGCAAGCGATGAAGAATCTGTCGTCGATGCCGATACGCAGCAT
TCGCATCGGCCGCGATTCCCTCACGAATACGTCCAGAGGCGTGTGCTACCTGGAGATGGGCAACGTGGTGGACGCGATGT
ACTTGCACACCGCGCTTACGAAGCAGGGATTGGTGGTCGACGGCAGAAAGGTGGAAATAACGTACTGTAAGCTTCATCAG
ATCAACAATGCGAACGCGTGGAAGTCGAACGACACTCAGCCGCAGAGGTACACGTTGGACGACGTTGCTCAATTGGCTGA
GTACAGTGCCAATTTGTATGCCAAGACGCCTGCACAGAAGGCCCATTATCTTCAGTATTACACGCAGTACTATCAGAATC
AGATAATGCAAGGCTCGGCGATCACGTTGCCGTCCCTGAATCAGACCGATCGGGTGAATGCGGCCGCGGCGGTGGCGCAG
TCCGCCATACAGCAGCTGCAGGCGTCCAGGAAGCTAGGAGGCGAAACGGACGACATGAAGGGACGACCGACGCCTACAGC
ACCGTCCAGCACAGCGTTAGCGAGTGGACGGGTTCCCGCGCACTCTAGCGATGGAAAAGTGTACTCTGTACCGGATGTCA
GCACTTATCACTATGACGAATCATCCGGCTACTATTATGATCCTAGCACGGGATTATATTACGATCCAAATTCGCAATAT
TATTACAATAGTCACACGCAGCAGTTTCTTTATTGGGACAGCGAGTCGTTCTCTTATCAACCGGCCAAGACTACTGCGAG
TACGACGCAAGGAGCTACGAGCACGGTAACAGCGACTGCAAGCAGCGCGGATTCCGCAAACACAATCAGTTCGACTGCGA
CTTTGTCGGCCGCTAATGCGGCTCAGGATGCGTCGAAGGAGGACGACGGTAAAAAGAAGGACAGCAAGCAAGACAAAGTA
AAAGTGGCGAAGAAAATAGCGAAAGACATGGAACGCTGGGCGAAAACACTGAATCAAAAGAAGGAGAACGCGAAAAGTAA
TTGGAATTCTGAGTTTGCCGGAGCGGACGGCAATCAAGGTGTCGGTGGTGGCGCTGCGGACGCGGGATACGCCATCCTGG
AGAAGAAAACTATCGCGAATCCTTATCACGAGGACGAGGATCAGAGCGGTAACGGTCTGGTAGCCGCCTATGGCGGTGGT
AGCGATACAGAGGAGGAAATAGAGGATGTGCAACAGGAAGAGAAGCAACATACAGATTGGAGCAAACTGGCGTGTCTTCT
CTGCAAACGGCAATTCCCGAGCAAAGAGGCGCTACTCCGACACCAACAGTTATCCGATCTCCACAAACAGAATTTGGAGA
ACTGGTATCAGGTGCGCGGCCTGGATCCTAACGATCCGCAGCAAAGGAACAACAAATACAGAGATCGCGCCAAGGAAAGA
AGAGCCAAGTACGGCGAACCCGAACCACCGCAGCCCAATAAGTTGAAAGAGAAATACTTGAAGACAAGAGTGGACGAGAT
GTCTGTATCTTACGAGGAGCCTACGCGAGCCGGCATCGGTTCCGACAACGTGGGTAATAAATTACTGCAGAAAATGGGCT
GGAGCGAAGGTATGGGCTTAGGGAAATCTAATCAAGGTAGAACGAGCATTATTGAAGCCGAAAGACGTGTCCCTACGGCT
GGTTTAGGTGCGAAGACTTCGTCGTACAACACCTTACCGGGTGACACGTACAAGGATTGCGTAAAGAAGATGATGTACGC
ACGATATCAAGAACTGTCCGACACGTAA
PEP: 
>LH21962-PA
MYSNNIDPWEPGYGPERRNHNSDYDYRSDYGSNRSPEYSEHRDVDHRDRDHRSPDYRNHRGRDRDRERDRSRDRRDRSRD
DRDRNYRDREDRYGRQRDRDSVERDRDRDRDRDRERDRSRRDRDRDRDRDRRGKRDDRDRDRDDDHSRESLDFEHDHGRA
YSSSMEGIHYKSQSPNNTIMIRGLAQHITENDVRQDILNCGLMPKDIRLIRKKDTGASRGFAFVEFNATQEAARWMEMKQ
GVLMLQDQYRALMQYSIPKECHVDKPPAKNTQDWHCVKCGAHNFKRRETCFKCSASRAESEEGGEGSDEISPHPTNTVLL
RGLDVLTTEDSVLQAMKNLSSMPIRSIRIGRDSLTNTSRGVCYLEMGNVVDAMYLHTALTKQGLVVDGRKVEITYCKLHQ
INNANAWKSNDTQPQRYTLDDVAQLAEYSANLYAKTPAQKAHYLQYYTQYYQNQIMQGSAITLPSLNQTDRVNAAAAVAQ
SAIQQLQASRKLGGETDDMKGRPTPTAPSSTALASGRVPAHSSDGKVYSVPDVSTYHYDESSGYYYDPSTGLYYDPNSQY
YYNSHTQQFLYWDSESFSYQPAKTTASTTQGATSTVTATASSADSANTISSTATLSAANAAQDASKEDDGKKKDSKQDKV
KVAKKIAKDMERWAKTLNQKKENAKSNWNSEFAGADGNQGVGGGAADAGYAILEKKTIANPYHEDEDQSGNGLVAAYGGG
SDTEEEIEDVQQEEKQHTDWSKLACLLCKRQFPSKEALLRHQQLSDLHKQNLENWYQVRGLDPNDPQQRNNKYRDRAKER
RAKYGEPEPPQPNKLKEKYLKTRVDEMSVSYEEPTRAGIGSDNVGNKLLQKMGWSEGMGLGKSNQGRTSIIEAERRVPTA
GLGAKTSSYNTLPGDTYKDCVKKMMYARYQELSDT
Swiss-ProtRNA-binding protein 5
KEGG     K13094     
SUPERFAMILYSSF90209  Ran binding protein zinc finger-like superfamily     
Gene3DG3DSA:4.10.1060.10     
PfamPF01585  G-patch; G-patch domain     
SMARTSM00443     
ProSiteProfilesPS50102  RRM; Eukaryotic RNA Recognition Motif (RRM) profile.     
CoilsCoil
ProSitePatternsPS01358  ZF_RANBP2_1; Zinc finger RanBP2-type signature.     

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